Whole genome pooled sequencing of individuals from 4 populations and 3 different color phenotype in order to uncover the genetic variants linked to color expression in the pearl oyster P. margaritifera.

'''DEFINITION''' The time series are derived from the regional chlorophyll reprocessed (MY) product as distributed by CMEMS (OCEANCOLOUR_MED_BGC_L3_NRT_009_141). This dataset, derived from multi-sensor (SeaStar-SeaWiFS, AQUA-MODIS, NOAA20-VIIRS, NPP-VIIRS, Envisat-MERIS and Sentinel3-OLCI) Rrs spectra produced by CNR using an in-house processing chain, is obtained by means of the Mediterranean Ocean Colour regional algorithms: an updated version of the MedOC4 (Case 1 (off-shore) waters, Volpe et al., 2019, with new coefficients) and AD4 (Case 2 (coastal) waters, Berthon and Zibordi, 2004). The processing chain and the techniques used for algorithms merging are detailed in Colella et al. (2023). Monthly regional mean values are calculated by performing the average of 2D monthly mean (weighted by pixel area) over the region of interest. The deseasonalized time series is obtained by applying the X-11 seasonal adjustment methodology on the original time series as described in Colella et al. (2016), and then the Mann-Kendall test (Mann, 1945; Kendall, 1975) and Sens’s method (Sen, 1968) are subsequently applied to obtain the magnitude of trend. This OMI has been introduced since the 2nd issue of Ocean State Report in 2017. '''CONTEXT''' Phytoplankton and chlorophyll concentration as a proxy for phytoplankton respond rapidly to changes in environmental conditions, such as light, temperature, nutrients and mixing (Colella et al. 2016). The character of the response depends on the nature of the change drivers, and ranges from seasonal cycles to decadal oscillations (Basterretxea et al. 2018). Therefore, it is of critical importance to monitor chlorophyll concentration at multiple temporal and spatial scales, in order to be able to separate potential long-term climate signals from natural variability in the short term. In particular, phytoplankton in the Mediterranean Sea is known to respond to climate variability associated with the North Atlantic Oscillation (NAO) and El Niño Southern Oscillation (ENSO) (Basterretxea et al. 2018, Colella et al. 2016). '''KEY FINDINGS''' In the Mediterranean Sea, the average chlorophyll trend for the 1997–2024 period is slightly negative, at -0.77 ± 0.59% per year, reinforcing the findings of the previous releases. This result contrasts with the analysis by Sathyendranath et al. (2018), which reported increasing chlorophyll concentrations across all European seas. From around 2010–2011 onward, excluding the 2018–2019 period, a noticeable decline in chlorophyll levels is evident in the deseasonalized time series (green line) and in the observed maxima (grey line), particularly from 2015. This sustained decline over the past decade contributes to the overall negative trend observed in the Mediterranean Sea. '''DOI (product):''' https://doi.org/10.48670/moi-00259

'''DEFINITION''' Variations of the Mediterranean Outflow Water at 1000 m depth are monitored through area-averaged salinity anomalies in specifically defined boxes. The salinity data are extracted from several CMEMS products and averaged in the corresponding monitoring domain: * IBI-MYP: IBI_MULTIYEAR_PHY_005_002 * IBI-NRT: IBI_ANALYSISFORECAST_PHYS_005_001 * GLO-MYP: GLOBAL_REANALYSIS_PHY_001_030 * CORA: INSITU_GLO_TS_REP_OBSERVATIONS_013_002_b * ARMOR: MULTIOBS_GLO_PHY_TSUV_3D_MYNRT_015_012 The anomalies of salinity have been computed relative to the monthly climatology obtained from IBI-MYP. Outcomes from diverse products are combined to deliver a unique multi-product result. Multi-year products (IBI-MYP, GLO,MYP, CORA, and ARMOR) are used to show an ensemble mean and the standard deviation of members in the covered period. The IBI-NRT short-range product is not included in the ensemble, but used to provide the deterministic analysis of salinity anomalies in the most recent year. '''CONTEXT''' The Mediterranean Outflow Water is a saline and warm water mass generated from the mixing processes of the North Atlantic Central Water and the Mediterranean waters overflowing the Gibraltar sill (Daniault et al., 1994). The resulting water mass is accumulated in an area west of the Iberian Peninsula (Daniault et al., 1994) and spreads into the North Atlantic following advective pathways (Holliday et al. 2003; Lozier and Stewart 2008, de Pascual-Collar et al., 2019). The importance of the heat and salt transport promoted by the Mediterranean Outflow Water flow has implications beyond the boundaries of the Iberia-Biscay-Ireland domain (Reid 1979, Paillet et al. 1998, van Aken 2000). For example, (i) it contributes substantially to the salinity of the Norwegian Current (Reid 1979), (ii) the mixing processes with the Labrador Sea Water promotes a salt transport into the inner North Atlantic (Talley and MacCartney, 1982; van Aken, 2000), and (iii) the deep anti-cyclonic Meddies developed in the African slope is a cause of the large-scale westward penetration of Mediterranean salt (Iorga and Lozier, 1999). Several studies have demonstrated that the core of Mediterranean Outflow Water is affected by inter-annual variability. This variability is mainly caused by a shift of the MOW dominant northward-westward pathways (Bozec et al. 2011), it is correlated with the North Atlantic Oscillation (Bozec et al. 2011) and leads to the displacement of the boundaries of the water core (de Pascual-Collar et al., 2019). The variability of the advective pathways of MOW is an oceanographic process that conditions the destination of the Mediterranean salt transport in the North Atlantic. Therefore, monitoring the Mediterranean Outflow Water variability becomes decisive to have a proper understanding of the climate system and its evolution (e.g. Bozec et al. 2011, Pascual-Collar et al. 2019). The CMEMS IBI-OMI_WMHE_mow product is aimed to monitor the inter-annual variability of the Mediterranean Outflow Water in the North Atlantic. The objective is the establishment of a long-term monitoring program to observe the variability and trends of the Mediterranean water mass in the IBI regional seas. To do that, the salinity anomaly is monitored in key areas selected to represent the main reservoir and the three main advective spreading pathways. More details and a full scientific evaluation can be found in the CMEMS Ocean State report Pascual et al., 2018 and de Pascual-Collar et al. 2019. '''CMEMS KEY FINDINGS''' The absence of long-term trends in the monitoring domain Reservoir (b) suggests the steadiness of water mass properties involved on the formation of Mediterranean Outflow Water. Results obtained in monitoring box North (c) present an alternance of periods with positive and negative anomalies. The last negative period started in 2016 reaching up to the present. Such negative events are linked to the decrease of the northward pathway of Mediterranean Outflow Water (Bozec et al., 2011), which appears to return to steady conditions in 2020 and 2021. Results for box West (d) reveal a cycle of negative (2015-2017) and positive (2017 up to the present) anomalies. The positive anomalies of salinity in this region are correlated with an increase of the westward transport of salinity into the inner North Atlantic (de Pascual-Collar et al., 2019), which appear to be maintained for years 2020-2021. Results in monitoring boxes North and West are consistent with independent studies (Bozec et al., 2011; and de Pascual-Collar et al., 2019), suggesting a westward displacement of Mediterranean Outflow Water and the consequent contraction of the northern boundary. Note: The key findings will be updated annually in November, in line with OMI evolutions. '''DOI (product):''' https://doi.org/10.48670/moi-00258

Wind analyses, estimated over the North Atlantic Ocean with a focus on some specific regions, are one the main ARCWIND (http://www.arcwind.eu/) project deliverables. They are estimated from various remotely sensed wind observations in combination with numerical model (WRF), with regular space (0.25deg in latitude and longitude), and time (00h:00, 06h:00, 12h:00, 18h:00 UTC), and based the method described in (Bentamy A., A. Mouche, A. Grouazel, A. Moujane, M. A. Ahmed. (2019): Using sentinel-1A SAR wind retrievals for enhancing scatterometer and radiometer regional wind analyses . International Journal Of Remote Sensing , 40(3), 1120-1147 . https://doi.org/10.1080/01431161.2018.1524174).

'''This product has been archived''' For operationnal and online products, please visit https://marine.copernicus.eu '''DEFINITION''' The trend map is derived from version 5 of the global climate-quality chlorophyll time series produced by the ESA Ocean Colour Climate Change Initiative (ESA OC-CCI, Sathyendranath et al. 2019; Jackson 2020) and distributed by CMEMS. The trend detection method is based on the Census-I algorithm as described by Vantrepotte et al. (2009), where the time series is decomposed as a fixed seasonal cycle plus a linear trend component plus a residual component. The linear trend is expressed in % year -1, and its level of significance (p) calculated using a t-test. Only significant trends (p < 0.05) are included. '''CONTEXT''' Phytoplankton are key actors in the carbon cycle and, as such, recognised as an Essential Climate Variable (ECV). Chlorophyll concentration is the most widely used measure of the concentration of phytoplankton present in the ocean. Drivers for chlorophyll variability range from small-scale seasonal cycles to long-term climate oscillations and, most importantly, anthropogenic climate change. Due to such diverse factors, the detection of climate signals requires a long-term time series of consistent, well-calibrated, climate-quality data record. Furthermore, chlorophyll analysis also demands the use of robust statistical temporal decomposition techniques, in order to separate the long-term signal from the seasonal component of the time series. '''CMEMS KEY FINDINGS''' The average global trend for the 1997-2020 period was 0.59% per year, with a maximum value of 25% per year and a minimum value of -6.1% per year. Positive trends are pronounced in the high latitudes of both northern and southern hemisphehres. The significant increases in chlorophyll reported in 2016-2017 (Sathyendranath et al., 2018b) for the Atlantic and Pacific oceans at high latitudes continued to be observed after the 2020 extension, as well as the negative trends over the equatorial Pacific and the Indian Ocean Gyre. Note: The key findings will be updated annually in November, in line with OMI evolutions. '''DOI (product):''' https://doi.org/10.48670/moi-00230

'''This product has been archived''' '''DEFINITION''' The linear change of zonal mean subsurface temperature over the period 1993-2019 at each grid point (in depth and latitude) is evaluated to obtain a global mean depth-latitude plot of subsurface temperature trend, expressed in °C. The linear change is computed using the slope of the linear regression at each grid point scaled by the number of time steps (27 years, 1993-2019). A multi-product approach is used, meaning that the linear change is first computed for 5 different zonal mean temperature estimates. The average linear change is then computed, as well as the standard deviation between the five linear change computations. The evaluation method relies in the study of the consistency in between the 5 different estimates, which provides a qualitative estimate of the robustness of the indicator. See Mulet et al. (2018) for more details. '''CONTEXT''' Large-scale temperature variations in the upper layers are mainly related to the heat exchange with the atmosphere and surrounding oceanic regions, while the deeper ocean temperature in the main thermocline and below varies due to many dynamical forcing mechanisms (Bindoff et al., 2019). Together with ocean acidification and deoxygenation (IPCC, 2019), ocean warming can lead to dramatic changes in ecosystem assemblages, biodiversity, population extinctions, coral bleaching and infectious disease, change in behavior (including reproduction), as well as redistribution of habitat (e.g. Gattuso et al., 2015, Molinos et al., 2016, Ramirez et al., 2017). Ocean warming also intensifies tropical cyclones (Hoegh-Guldberg et al., 2018; Trenberth et al., 2018; Sun et al., 2017). '''CMEMS KEY FINDINGS''' The results show an overall ocean warming of the upper global ocean over the period 1993-2019, particularly in the upper 300m depth. In some areas, this warming signal reaches down to about 800m depth such as for example in the Southern Ocean south of 40°S. In other areas, the signal-to-noise ratio in the deeper ocean layers is less than two, i.e. the different products used for the ensemble mean show weak agreement. However, interannual-to-decadal fluctuations are superposed on the warming signal, and can interfere with the warming trend. For example, in the subpolar North Atlantic decadal variations such as the so called ‘cold event’ prevail (Dubois et al., 2018; Gourrion et al., 2018), and the cumulative trend over a quarter of a decade does not exceed twice the noise level below about 100m depth. Note: The key findings will be updated annually in November, in line with OMI evolutions. '''DOI (product):''' https://doi.org/10.48670/moi-00244

'''This product has been archived''' '''DEFINITION''' The temporal evolution of thermosteric sea level in an ocean layer is obtained from an integration of temperature driven ocean density variations, which are subtracted from a reference climatology to obtain the fluctuations from an average field. The regional thermosteric sea level values are then averaged from 60°S-60°N aiming to monitor interannual to long term global sea level variations caused by temperature driven ocean volume changes through thermal expansion as expressed in meters (m). '''CONTEXT''' The global mean sea level is reflecting changes in the Earth’s climate system in response to natural and anthropogenic forcing factors such as ocean warming, land ice mass loss and changes in water storage in continental river basins. Thermosteric sea-level variations result from temperature related density changes in sea water associated with volume expansion and contraction. Global thermosteric sea level rise caused by ocean warming is known as one of the major drivers of contemporary global mean sea level rise (Cazenave et al., 2018; Oppenheimer et al., 2019). '''CMEMS KEY FINDINGS''' Since the year 2005 the upper (0-2000m) near-global (60°S-60°N) thermosteric sea level rises at a rate of 1.3±0.2 mm/year. Note: The key findings will be updated annually in November, in line with OMI evolutions. '''DOI (product):''' https://doi.org/10.48670/moi-00240

Annual time series of salmon recruitement biomass (2005-2014): • Time series of atlantic salmon recruitment • Location and Long Term Average (LTA) of atlantic salmon recruitment per Management Unit, that could be a river, basin district, a region or a whole country.

Pentadal time-series of the area in the North Atlantic (IHO, 1953) where ice occurred. On a 1 degree grid find all cells that experienced ice in at least 1 month of each 5 year period between 1915 and 2014, and then calculate the total area that these cells covered.

The three digital maps provided in this product aim to assess the degree of Offshore windfarm siting suitability existing over a geographical area with a focal point where waters of France and Spain meet in Biscay Bay on 500 m depth. The maps display respectively the spatial distribution of the average and lowest windfarm siting suitability scores along with the average wind speed distribution over a time period of 10 years. They are part of a process set up to assess the fit for use quality of the currently available datasets to support a preliminary selection of potential offshore sites for wind energy development. To build these maps, GIS tools were applied to several key spatial datasets from the 5 data type domains considered in the project: Air, Marine Water, Riverbed/Seabed, Biota/Biology and Human Activities, collated during the initial stages of the project. Initially, each selected dataset was formatted and clipped to the study area extent and spatially classified according to suitability scores, to define raster layers with the variables depicting levels of current anthropogenic and environmental spatial occupation of activities, seabed depth and slope, distances to shoreline, shipping intensity, mean significant wave height, and substrate type. These pre-processed layers were employed as inputs for applying a spatial multi-criteria model using a wind farming suitability classification based on a discrete 5 grades index, ranging from Very Low up to Very High suitability. In adition to suitability maps, an average wind speed spatial distribution map for a 10 years period, at 10 m height, was obtained over the study area from the raster processing of a wind speed time series of monthly means available from daily wind analysis data. The characteristics of the datasets used in this exercise underwent an appropriateness evaluation procedure based on a comparison between their measured quality and those specified for the product. All the spatial information made available in these maps and from the subsequent appropriateness analysis of the datasets, contributes to a clearer overview of the amount of public-access baseline knowledge currently existing for the North Atlantic basin area.