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2023

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  • Species distribution models (GAM, Maxent and Random Forest ensemble) predicting the distribution of discrete Lophelia pertusa - Desmophylum pertusum colonies assemblage in the Celtic Sea. This community is considered ecologically coherent according to the cluster analysis conducted by Parry et al. (2015) on image samples. Modelling its distribution complements existing work on their definition and offers a representation of the extent of the areas of the North East Atlantic where they can occur based on the best available knowledge. This work was performed at the University of Plymouth in 2021.

  • EMODnet Chemistry aims to provide access to marine chemistry datasets and derived data products concerning eutrophication, acidity and contaminants. The importance of the selected substances and other parameters relates to the Marine Strategy Framework Directive (MSFD). This aggregated dataset contains all unrestricted EMODnet Chemistry data on eutrophication and acidity, and covers the Northeast Atlantic Ocean (40W). Data were aggregated and quality controlled by 'IFREMER / IDM / SISMER - Scientific Information Systems for the SEA' in France. ITS-90 water temperature and water body salinity variables have also been included ('as are') to complete the eutrophication and acidity data. If you use these variables for calculations, please refer to SeaDataNet for the quality flags: https://www.seadatanet.org/Products/Aggregated-datasets. Regional datasets concerning eutrophication and acidity are automatically harvested, and the resulting collections are aggregated and quality controlled using ODV Software and following a common methodology for all sea regions ( https://doi.org/10.13120/8xm0-5m67). Parameter names are based on P35 vocabulary, which relates to EMODnet Chemistry aggregated parameter names and is available at: https://vocab.nerc.ac.uk/search_nvs/P35/. When not present in original data, water body nitrate plus nitrite was calculated by summing all nitrate and nitrite parameters. The same procedure was applied for water body dissolved inorganic nitrogen (DIN), which was calculated by summing all nitrate, nitrite, and ammonium parameters. Concentrations per unit mass were converted to a unit volume using a constant density of 1.025 kg/L. The aggregated dataset can also be downloaded as an ODV collection and spreadsheet, which is composed of a metadata header followed by tab separated values. This spreadsheet can be imported to ODV Software for visualisation (more information can be found at: https://www.seadatanet.org/Software/ODV).

  • '''Short description:''' For the Global Ocean- Sea Surface Temperature L3 Observations . This product provides daily foundation sea surface temperature from multiple satellite sources. The data are intercalibrated. This product consists in a fusion of sea surface temperature observations from multiple satellite sensors, daily, over a 0.05° resolution grid. It includes observations by polar orbiting from the ESA CCI / C3S archive . The L3S SST data are produced selecting only the highest quality input data from input L2P/L3P images within a strict temporal window (local nightime), to avoid diurnal cycle and cloud contamination. The observations of each sensor are intercalibrated prior to merging using a bias correction based on a multi-sensor median reference correcting the large-scale cross-sensor biases. '''DOI (product) :''' https://doi.org/10.48670/mds-00329

  • '''DEFINITION''' The sea level ocean monitoring indicator has been presented in the Copernicus Ocean State Report #8. The ocean monitoring indicator on regional mean sea level is derived from the DUACS delayed-time (DT-2024 version, “my” (multi-year) dataset used when available) sea level anomaly maps from satellite altimetry based on a stable number of altimeters (two) in the satellite constellation. These products are distributed by the Copernicus Climate Change Service and the Copernicus Marine Service (SEALEVEL_GLO_PHY_CLIMATE_L4_MY_008_057). The time series of area averaged anomalies correspond to the area average of the maps in the Irish-Biscay-Iberian (IBI) Sea weighted by the cosine of the latitude (to consider the changing area in each grid with latitude) and by the proportion of ocean in each grid (to consider the coastal areas). The time series are corrected from regional mean GIA correction (weighted GIA mean of a 27 ensemble model following Spada et Melini, 2019). The time series are adjusted for seasonal annual and semi-annual signals and low-pass filtered at 6 months. Then, the trends/accelerations are estimated on the time series using ordinary least square fit.The trend uncertainty is provided in a 90% confidence interval. It is calculated as the weighted mean uncertainties in the region from Prandi et al., 2021. This estimate only considers errors related to the altimeter observation system (i.e., orbit determination errors, geophysical correction errors and inter-mission bias correction errors). The presence of the interannual signal can strongly influence the trend estimation considering to the altimeter period considered (Wang et al., 2021; Cazenave et al., 2014). The uncertainty linked to this effect is not considered. ""CONTEXT "" Change in mean sea level is an essential indicator of our evolving climate, as it reflects both the thermal expansion of the ocean in response to its warming and the increase in ocean mass due to the melting of ice sheets and glaciers (WCRP Global Sea Level Budget Group, 2018). At regional scale, sea level does not change homogenously. It is influenced by various other processes, with different spatial and temporal scales, such as local ocean dynamic, atmospheric forcing, Earth gravity and vertical land motion changes (IPCC WGI, 2021). The adverse effects of floods, storms and tropical cyclones, and the resulting losses and damage, have increased as a result of rising sea levels, increasing people and infrastructure vulnerability and food security risks, particularly in low-lying areas and island states (IPCC, 2022a). Adaptation and mitigation measures such as the restoration of mangroves and coastal wetlands, reduce the risks from sea level rise (IPCC, 2022b). In IBI region, the RMSL trend is modulated by decadal variations. As observed over the global ocean, the main actors of the long-term RMSL trend are associated with anthropogenic global/regional warming. Decadal variability is mainly linked to the strengthening or weakening of the Atlantic Meridional Overturning Circulation (AMOC) (e.g. Chafik et al., 2019). The latest is driven by the North Atlantic Oscillation (NAO) for decadal (20-30y) timescales (e.g. Delworth and Zeng, 2016). Along the European coast, the NAO also influences the along-slope winds dynamic which in return significantly contributes to the local sea level variability observed (Chafik et al., 2019). ""KEY FINDINGS "" Over the [1999/02/20 to 2023/12/31] period, the area-averaged sea level in the IBI area rises at a rate of 3.6 ± 0.8 mm/yr with an acceleration of 0.15 ± 0.06 mm/yr². This trend estimation is based on the altimeter measurements corrected from global GIA correction (Spada et Melini, 2019) to consider the ongoing movement of land. T The TOPEX-A is no longer included in the computation of regional mean sea level parameters (trend and acceleration) with version 2024 products due to potential drifts, and ongoing work aims to develop a new empirical correction. Calculation begins in February 1999 (the start of the TOPEX-B period). '''DOI (product):''' https://doi.org/10.48670/moi-00252

  • '''Short description:''' For the Global Ocean - The product contains daily L3 gridded sea surface wind observations from available scatterometers with resolutions corresponding to the L2 swath products: *0.5 degrees grid for the 50 km scatterometer L2 inputs, *0.25 degrees grid based on 25 km scatterometer swath observations, *and 0.125 degrees based on 12.5 km scatterometer swath observations, i.e., from the coastal products. Data from ascending and descending passes are gridded separately. The product provides stress-equivalent wind and stress variables as well as their divergence and curl. The MY L3 products follow the availability of the reprocessed EUMETSAT OSI SAF L2 products and are available for: The ASCAT scatterometer on MetOp-A and Metop-B at 0.125 and 0.25 degrees; The Seawinds scatterometer on QuikSCAT at 0.25 and 0.5 degrees; The AMI scatterometer on ERS-1 and ERS-2 at 0.25 degrees; The OSCAT scatterometer on Oceansat-2 at 0.25 and 0.5 degrees; '''DOI (product) :''' https://doi.org/10.48670/moi-00183

  • This visualization product displays the cigarette related items abundance of marine macro-litter (> 2.5cm) per beach per year from non-MSFD monitoring surveys, research & cleaning operations without UNEP-MARLIN data. EMODnet Chemistry included the collection of marine litter in its 3rd phase. Since the beginning of 2018, data of beach litter have been gathered and processed in the EMODnet Chemistry Marine Litter Database (MLDB). The harmonization of all the data has been the most challenging task considering the heterogeneity of the data sources, sampling protocols and reference lists used on a European scale. Preliminary processing were necessary to harmonize all the data: - Exclusion of OSPAR 1000 protocol: in order to follow the approach of OSPAR that it is not including these data anymore in the monitoring; - Selection of surveys from non-MSFD monitoring, cleaning and research operations; - Exclusion of beaches without coordinates; - Selection of cigarette related items only. The list of selected items is attached to this metadata. This list was created using EU Marine Beach Litter Baselines and EU Threshold Value for Macro Litter on Coastlines from JRC (these two documents are attached to this metadata); - Exclusion of surveys without associated length; - Exclusion of surveys referring to the UNEP-MARLIN list: the UNEP-MARLIN protocol differs from the other types of monitoring in that cigarette butts are surveyed in a 10m square. To avoid comparing abundances from very different protocols, the choice has been made to distinguish in two maps the cigarette related items results associated with the UNEP-MARLIN list from the others; - Normalization of survey lengths to 100m & 1 survey / year: in some case, the survey length was not 100m, so in order to be able to compare the abundance of litter from different beaches a normalization is applied using this formula: Number of cigarette related items of the survey (normalized by 100 m) = Number of cigarette related items of the survey x (100 / survey length) Then, this normalized number of cigarette related items is summed to obtain the total normalized number of cigarette related items for each survey. Finally, the median abundance of cigarette related items for each beach and year is calculated from these normalized abundances of cigarette related items per survey. Percentiles 50, 75, 95 & 99 have been calculated taking into account cigarette related items from other sources data (excluding UNEP-MARLIN protocol) for all years. More information is available in the attached documents. Warning: the absence of data on the map doesn't necessarily mean that they don't exist, but that no information has been entered in the Marine Litter Database for this area.

  • “SMOS Near Real Time Level 2 swath wind speed” (SMOS L2WS NRT) products, which are SMOS retrieved surface wind speed gridded maps with a spatial sampling of 1/4°x 1/4° and consisting of orbital segments (containing parts of ascending and descending half orbits) following the granularity of the SMOS Level 1B near real time (NRT) data products. SMOS L2WS NRT products are available within 4 to 6 hours from sensing and are generated in NetCDF-4 format as described in the "SMOS Wind Data Service Product Description Document" (http://www.smosstorm.org/Document-tools/SMOS-Wind-Data-Service-Documentation).

  • This visualization product displays marine macro-litter (> 2.5cm) material categories percentage per beach per year from Marine Strategy Framework Directive (MSFD) monitoring surveys. EMODnet Chemistry included the collection of marine litter in its 3rd phase. Since the beginning of 2018, data of beach litter have been gathered and processed in the EMODnet Chemistry Marine Litter Database (MLDB). The harmonization of all the data has been the most challenging task considering the heterogeneity of the data sources, sampling protocols and reference lists used on a European scale. Preliminary processing were necessary to harmonize all the data: - Exclusion of OSPAR 1000 protocol: in order to follow the approach of OSPAR that it is not including these data anymore in the monitoring; - Selection of MSFD surveys only (exclusion of other monitoring, cleaning and research operations); - Exclusion of beaches without coordinates; - Some litter types like organic litter, small fragments (paraffin and wax; items > 2.5cm) and pollutants have been removed. The list of selected items is attached to this metadata. This list was created using EU Marine Beach Litter Baselines and EU Threshold Value for Macro Litter on Coastlines from JRC (these two documents are attached to this metadata); - Exclusion of the "feaces" category: it concerns more exactly the items of dog excrements in bags of the OSPAR (item code: 121) and ITA (item code: IT59) reference lists; - Normalization of survey lengths to 100m & 1 survey / year: in some case, the survey length was not exactly 100m, so in order to be able to compare the abundance of litter from different beaches a normalization is applied using this formula: Number of items (normalized by 100 m) = Number of litter per items x (100 / survey length) Then, this normalized number of items is summed to obtain the total normalized number of litter for each survey. Sometimes the survey length was null or equal to 0. Assuming that the MSFD protocol has been applied, the length has been set at 100m in these cases. To calculate percentages for each material category, formula applied is: Material (%) = (∑number of items (normalized at 100 m) of each material category)*100 / (∑number of items (normalized at 100 m) of all categories) The material categories differ between reference lists (OSPAR, ITA, TSG_ML, UNEP, UNEP_MARLIN). In order to apply a common procedure for all the surveys, the material categories have been harmonized. More information is available in the attached documents. Warning: the absence of data on the map doesn't necessarily mean that they don't exist, but that no information has been entered in the Marine Litter Database for this area.

  • Moving 6-year analysis of Water body dissolved oxygen concentration in the Mediterranean Sea for each season: - winter: January-March, - spring: April-June, - summer: July-September, - autumn: October-December. Every year of the time dimension corresponds to the 6-year centered average of the season. 6-years periods span from 1971-1976 until 2017-2022. Data Sources: observational data from SeaDataNet/EMODNet Chemistry Data Network. Description of DIVA analysis: The computation was done with the DIVAnd (Data-Interpolating Variational Analysis in n dimensions), version 2.7.9, using GEBCO 30sec topography for the spatial connectivity of water masses. The horizontal resolution of the produced DIVAnd maps grids is dx=dy=0.125 degrees (around 13.5km and 10.9km accordingly). The vertical resolution is 27 depth levels: [0.,5.,10.,20.,30.,50.,75.,100.,125.,150.,200.,250.,300.,400.,500.,600.,700.,800.,900.,1000.,1100.,1200.,1300.,1400.,1500.,1750.,2000.]. The horizontal correlation length is 200km. The vertical correlation length (in meters) was set twices the vertical resolution: [10.,10.,20.,20.,40.,50.,50.,50.,50.,100.,100.,100.,200.,200.,200.,200.,200.,200.,200.,200.,200.,200.,200.,200.,500.,500.,500.]. Duplicates check was performed using the following criteria for space and time: dlon=0.001deg., dlat=0.001deg., ddepth=1m, dtime=1hour, dvalue=0.1. The error variance (epsilon2) was set equal to 1 for profiles and 10 for time series to reduce the influence of close data near the coasts. An anamorphosis transformation was applied to the data (function DIVAnd.Anam.loglin) to avoid unrealistic negative values: threshold value=200. A background analysis field was used for all years (1971-2022) with correlation length equal to 600km and error variance (epsilon2) equal to 20. Quality control of the observations was applied using the interpolated field (QCMETHOD=3). Residuals (differences between the observations and the analysis (interpolated linearly to the location of the observations) were calculated. Observations with residuals outside the minimum and maximum values of the 99% quantile were discarded from the analysis. Originators of Italian data sets-List of contributors: - Brunetti Fabio (OGS) - Cardin Vanessa, Bensi Manuel doi:10.6092/36728450-4296-4e6a-967d-d5b6da55f306 - Cardin Vanessa, Bensi Manuel, Ursella Laura, Siena Giuseppe doi:10.6092/f8e6d18e-f877-4aa5-a983-a03b06ccb987 - Cataletto Bruno (OGS) - Cinzia Comici Cinzia (OGS) - Civitarese Giuseppe (OGS) - DeVittor Cinzia (OGS) - Giani Michele (OGS) - Kovacevic Vedrana (OGS) - Mosetti Renzo (OGS) - Solidoro C.,Beran A.,Cataletto B.,Celussi M.,Cibic T.,Comici C.,Del Negro P.,De Vittor C.,Minocci M.,Monti M.,Fabbro C.,Falconi C.,Franzo A.,Libralato S.,Lipizer M.,Negussanti J.S.,Russel H.,Valli G., doi:10.6092/e5518899-b914-43b0-8139-023718aa63f5 - Celio Massimo (ARPA FVG) - Malaguti Antonella (ENEA) - Fonda Umani Serena (UNITS) - Bignami Francesco (ISAC/CNR) - Boldrini Alfredo (ISMAR/CNR) - Marini Mauro (ISMAR/CNR) - Miserocchi Stefano (ISMAR/CNR) - Zaccone Renata (IAMC/CNR) - Lavezza, R., Dubroca, L. F. C., Ludicone, D., Kress, N., Herut, B., Civitarese, G., Cruzado, A., Lefèvre, D.,Souvermezoglou, E., Yilmaz, A., Tugrul, S., and Ribera d'Alcala, M.: Compilation of quality controlled nutrient profiles from the Mediterranean Sea, doi:10.1594/PANGAEA.771907, 2011.

  • This dataset concerns sequences from the metabarcoding analysis (bacteria & archaea) of 4 hydrothermal sites from the TAG field (2 inactive sites & 2 weakly active sites) collected during the HERMINE2 oceanographic campaign.