Here, our study aimed to first assess the influence of plastic on the bacterial community belonging to water, plastic and the microbiome of the giant clam and on the organism's physiology of this putative sentinel species. Our second objective was to identify bacteria whose abundance varies significantly with plastic concentration. Overall, this study will fill the gap towards a better understanding of the impact of plastic pollution on bacterial community assemblages in both inert and living environments.

'''DEFINITION''' The OMI_EXTREME_SST_MEDSEA_sst_mean_and_anomaly_obs indicator is based on the computation of the 99th and the 1st percentiles from in situ data (observations). It is computed for the variable sea surface temperature measured by in situ buoys at depths between 0 and 5 meters. The use of percentiles instead of annual maximum and minimum values, makes this extremes study less affected by individual data measurement errors. The percentiles are temporally averaged, and the spatial evolution is displayed, jointly with the anomaly in the target year. This study of extreme variability was first applied to sea level variable (Pérez Gómez et al 2016) and then extended to other essential variables, sea surface temperature and significant wave height (Pérez Gómez et al 2018). '''CONTEXT''' Sea surface temperature (SST) is one of the essential ocean variables affected by climate change (mean SST trends, SST spatial and interannual variability, and extreme events). In Europe, several studies show warming trends in mean SST for the last years (von Schuckmann et al., 2016; IPCC, 2021, 2022). An exception seems to be the North Atlantic, where, in contrast, anomalous cold conditions have been observed since 2014 (Mulet et al., 2018; Dubois et al. 2018; IPCC 2021, 2022). Extremes may have a stronger direct influence in population dynamics and biodiversity. According to Alexander et al. 2018 the observed warming trend will continue during the 21st Century and this can result in exceptionally large warm extremes. Monitoring the evolution of sea surface temperature extremes is, therefore, crucial.The Mediterranean Sea has showed a constant increase of the SST in the last three decades across the whole basin with more frequent and severe heat waves (Juza et al., 2022). Deep analyses of the variations have displayed a non-uniform rate in space, being the warming trend more evident in the eastern Mediterranean Sea with respect to the western side. This variation rate is also changing in time over the three decades with differences between the seasons (e.g. Pastor et al. 2018; Pisano et al. 2020), being higher in Spring and Summer, which would affect the extreme values. '''COPERNICUS MARINE SERVICE KEY FINDINGS''' The mean 99th percentiles showed in the area present values from 25ºC in Ionian Sea and 26º in the Alboran sea and Gulf of Lion to 27ºC in the East of Iberian Peninsula. The standard deviation ranges from 0.6ºC to 1.2ºC in the Western Mediterranean and is around 2.2ºC in the Ionian Sea. Results for this year show a slight negative anomaly in the Ionian Sea (-1ºC) inside the standard deviation and a clear positive anomaly in the Western Mediterranean Sea reaching +2.2ºC, almost two times the standard deviation in the area. '''DOI (product):''' https://doi.org/10.48670/moi-00267

'''DEFINITION''' The sea level ocean monitoring indicator has been presented in the Copernicus Ocean State Report #8. The sea level ocean monitoring indicator is derived from the DUACS delayed-time (DT-2024 version, “my” (multi-year) dataset used when available) sea level anomaly maps from satellite altimetry based on a stable number of altimeters (two) in the satellite constellation. The product is distributed by the Copernicus Climate Change Service and the Copernicus Marine Service (SEALEVEL_GLO_PHY_CLIMATE_L4_MY_008_057). At each grid point, the trends/accelerations are estimated on the time series corrected from regional GIA correction (GIA map of a 27 ensemble model following Spada et Melini, 2019) and adjusted from annual and semi-annual signals. Regional uncertainties on the trends estimates can be found in Prandi et al., 2021. '''CONTEXT''' Change in mean sea level is an essential indicator of our evolving climate, as it reflects both the thermal expansion of the ocean in response to its warming and the increase in ocean mass due to the melting of ice sheets and glaciers(WCRP Global Sea Level Budget Group, 2018). According to the IPCC 6th assessment report (IPCC WGI, 2021), global mean sea level (GMSL) increased by 0.20 [0.15 to 0.25] m over the period 1901 to 2018 with a rate of rise that has accelerated since the 1960s to 3.7 [3.2 to 4.2] mm/yr for the period 2006–2018. Human activity was very likely the main driver of observed GMSL rise since 1970 (IPCC WGII, 2021). The weight of the different contributions evolves with time and in the recent decades the mass change has increased, contributing to the on-going acceleration of the GMSL trend (IPCC, 2022a; Legeais et al., 2020; Horwath et al., 2022). At regional scale, sea level does not change homogenously, and regional sea level change is also influenced by various other processes, with different spatial and temporal scales, such as local ocean dynamic, atmospheric forcing, Earth gravity and vertical land motion changes (IPCC WGI, 2021). The adverse effects of floods, storms and tropical cyclones, and the resulting losses and damage, have increased as a result of rising sea levels, increasing people and infrastructure vulnerability and food security risks, particularly in low-lying areas and island states (IPCC, 2019, 2022b). Adaptation and mitigation measures such as the restoration of mangroves and coastal wetlands, reduce the risks from sea level rise (IPCC, 2022c). '''KEY FINDINGS''' The altimeter sea level trends over the [1999/02/20 to 2025/10/18] period exhibit large-scale variations with trends up to +10 mm/yr in regions such as the western tropical Pacific Ocean. In this area, trends are mainly of thermosteric origin (Legeais et al., 2018; Meyssignac et al., 2017) in response to increased easterly winds during the last two decades associated with the decreasing Interdecadal Pacific Oscillation (IPO)/Pacific Decadal Oscillation (e.g., McGregor et al., 2012; Merrifield et al., 2012; Palanisamy et al., 2015; Rietbroek et al., 2016). Prandi et al. (2021) have estimated a regional altimeter sea level error budget from which they determine a regional error variance-covariance matrix and they provide uncertainties of the regional sea level trends. Over 1993-2019, the averaged local sea level trend uncertainty is around 0.83 mm/yr with local values ranging from 0.78 to 1.22 mm/yr. '''DOI (product):''' https://doi.org/10.48670/moi-00238

'''DEFINITION''' The indicator of the Kuroshio extension phase variations is based on the standardized high frequency altimeter Eddy Kinetic Energy (EKE) averaged in the area 142-149°E and 32-37°N and computed from the DUACS delayed-time (CMEMS SEALEVEL_GLO_PHY_L4_MY_008_047) and near real-time (CMEMS SEALEVEL_GLO_PHY_L4_NRT _008_046) altimeter sea level gridded products. ""CONTEXT"" The Kuroshio Extension is an eastward-flowing current in the subtropical western North Pacific after the Kuroshio separates from the coast of Japan at 35°N, 140°E. Being the extension of a wind-driven western boundary current, the Kuroshio Extension is characterized by a strong variability and is rich in large-amplitude meanders and energetic eddies (Niiler et al., 2003; Qiu, 2003, 2002). The Kuroshio Extension region has the largest sea surface height variability on sub-annual and decadal time scales in the extratropical North Pacific Ocean (Jayne et al., 2009; Qiu and Chen, 2010, 2005). Prediction and monitoring of the path of the Kuroshio are of huge importance for local economies as the position of the Kuroshio extension strongly determines the regions where phytoplankton and hence fish are located. Unstable (contracted) phase of the Kuroshio enhance the production of Chlorophyll (Lin et al., 2014). ""CMEMS KEY FINDINGS"" The different states of the Kuroshio extension phase have been presented and validated by (Bessières et al., 2013) and further reported by Drévillon et al. (2018) in the Copernicus Ocean State Report #2. Two rather different states of the Kuroshio extension are observed: an ‘elongated state’ (also called ‘strong state’) corresponding to a narrow strong steady jet, and a ‘contracted state’ (also called ‘weak state’) in which the jet is weaker and more unsteady, spreading on a wider latitudinal band. When the Kuroshio Extension jet is in a contracted (elongated) state, the upstream Kuroshio Extension path tends to become more (less) variable and regional eddy kinetic energy level tends to be higher (lower). In between these two opposite phases, the Kuroshio extension jet has many intermediate states of transition and presents either progressively weakening or strengthening trends. In 2018, the indicator reveals an elongated state followed by a weakening neutral phase since then. '''DOI (product):''' https://doi.org/10.48670/moi-00222

'''Short description:''' Altimeter satellite along-track sea surface heights anomalies (SLA) computed with respect to a twenty-year [1993, 2012] mean with a 1Hz (~7km) and 5Hz (~1km) sampling. It serves in near-real time applications. This product is processed by the DUACS multimission altimeter data processing system. It processes data from all altimeter missions available (e.g. Sentinel-6A, Jason-3, Sentinel-3A, Sentinel-3B, Saral/AltiKa, Cryosat-2, HY-2B). The system exploits the most recent datasets available based on the enhanced OGDR/NRT+IGDR/STC production. All the missions are homogenized with respect to a reference mission. Part of the processing is fitted to the European Seas. (see QUID document or http://duacs.cls.fr [http://duacs.cls.fr] pages for processing details). The product gives additional variables (e.g. Mean Dynamic Topography, Dynamic Atmospheric Correction, Ocean Tides, Long Wavelength Errors) that can be used to change the physical content for specific needs (see PUM document for details) '''Associated products''' A time invariant product http://marine.copernicus.eu/services-portfolio/access-to-products/?option=com_csw&view=details&product_id=SEALEVEL_GLO_PHY_NOISE_L4_STATIC_008_033 [http://marine.copernicus.eu/services-portfolio/access-to-products/?option=com_csw&view=details&product_id=SEALEVEL_GLO_PHY_NOISE_L4_STATIC_008_033] describing the noise level of along-track measurements is available. It is associated to the sla_filtered variable. It is a gridded product. One file is provided for the global ocean and those values must be applied for Arctic and Europe products. For Mediterranean and Black seas, one value is given in the QUID document. '''DOI (product) :''' https://doi.org/10.48670/moi-00140

'''Short description:''' Altimeter satellite gridded Sea Level Anomalies (SLA) computed with respect to a twenty-year [1993, 2012] mean. The SLA is estimated by Optimal Interpolation, merging the L3 along-track measurement from the different altimeter missions available. Part of the processing is fitted to the Global Ocean. (see QUID document or http://duacs.cls.fr [http://duacs.cls.fr] pages for processing details). The product gives additional variables (i.e. Absolute Dynamic Topography and geostrophic currents (absolute and anomalies)). It serves in near-real time applications. This product is processed by the DUACS multimission altimeter data processing system. '''DOI (product) :''' https://doi.org/10.48670/moi-00149

'''This product has been archived''' This dataset provide a times series of gap free map of Sea Surface Temperature (SST) foundation at high resolution on a 0.10 x 0.10 degree grid (approximately 10 x 10 km) for the Global Ocean, every 24 hours. Whereas along swath observation data essentially represent the skin or sub-skin SST, the Level 4 SST product is defined to represent the SST foundation (SSTfnd). SSTfnd is defined within GHRSST as the temperature at the base of the diurnal thermocline. It is so named because it represents the foundation temperature on which the diurnal thermocline develops during the day. SSTfnd changes only gradually along with the upper layer of the ocean, and by definition it is independent of skin SST fluctuations due to wind- and radiation-dependent diurnal stratification or skin layer response. It is therefore updated at intervals of 24 hrs. SSTfnd corresponds to the temperature of the upper mixed layer which is the part of the ocean represented by the top-most layer of grid cells in most numerical ocean models. It is never observed directly by satellites, but it comes closest to being detected by infrared and microwave radiometers during the night, when the previous day's diurnal stratification can be assumed to have decayed. The processing combines the observations of multiple polar orbiting and geostationary satellites, embedding infrared of microwave radiometers. All these sources are intercalibrated with each other before merging. A ranking procedure is used to select the best sensor observation for each grid point. An optimal interpolation is used to fill in where observations are missing. '''DOI (product) :''' https://doi.org/10.48670/mds-00321

The dataset dcm_dtb.txt contains bio-optical measurements and environmental parameters associated with  Deep Chlorophyll Maxima (DCM) acquired by BGC-Argo profiling floats. For each BGC-Argo profile the data files includes the World Meteorological Organization (WMO) and profile numbers, the Data Assembly Center (DAC), the geographical position (LON and LAT), the date of the profile in Julian Day (JULD) and in YYYY-MM-DD format; the region of the profile (REGION, acronyms detailed in the region.txt file), the DCM zonal attribution (ZONE, acronyms detailed in the zone.txt file), the vertical resolution of measurements of the concentration of the chlorophyll a [Chla] and of the backscattering coefficient (bbp) within the 250 first meters, the Mixed Layer Depth (MLD, m), the qualification of the vertical profile (DCM_TYPE) as Deep Biomass Maximum (3), Deep photoAcclimation Maximum (2), or presenting no DCM (1); the depth of the DCM (DCM_DEPTH); the chlorophyll a concentration (CHLA_DCM, mg chla m-3 ) the backscattering coefficient (BBP_DCM, m-1), and the Brunt-Vaisala frequency (N2_DCM) at the DCM depth; the nitracline depth (NCLINE_DEPTH, m) and steepness (NCLINE_STEEP, µmol NO3 m-3 m-1), the mean nitrate concentration within the Mixed Layer (NO3_MEAN_MLD, µmol NO3 m-3), the mean daily Photosynthetically Available Radiation in the Mixed Layer (MEAN_IPAR_MLD, E m -1 d -1), the daily Photosynthetically Available Radiation at the nitracline depth (IPAR_NCLINE, E m-2 d-1);  and the [Chla] measured by satellite (CHLA_SAT, mg chla m-3). The dataset shape_NASTG_ASEW.txt contains the seasonal median, the first and third quartiles of the [Chla] and of the bbp profiles for the North Atlantic Subtropical Gyre and Atlantic SubEquatorial Waters regions. The dataset climato_NASTG_ASEW.txt contains the monthly mean and standard deviations of the DCM depth (DCM_depth), the isolume depth of daily Photosynthetically Available Radiation of 20 E m-2 d-1 (iPAR_20), the nitracline depth, and the Mixed Layer Depth (MLD) for the profiles within the North Atlantic Subtropical Gyre and Atlantic SubEquatorial Waters regions.  The qualification and processing of the BGC-Argo profiles, as well as the DCM detection (DCM_TYPE) and the estimation of the environmental parameters, were applied as described from Cornec, M., Claustre, H., Mignot, A., Guidi, L., Lacour, L., Poteau, A., D’Ortenzio, F.,Gentili, B., Schmechtig, C., (to be updated.) Deep Chlorophyll Maxima in the global ocean: occurrences, drivers and characteristics. Global Biogeochemical Cycles, to be updated The [Chla] satellite variable was obtained by the match of each BGC-Argo profile with a L3S [Chla] product from the Ocean Colour-Climate Change Initiative v4.0 database merging observations from MERIS, MODIS, VIIRS and SeaWiFs, at a monthly and 4x4-km-pixel resolution, up to December 31, 2019 (ftp://oc-cci-data:ELaiWai8ae@oceancolour.org/occci-v4.2/).

The drought index (DI) is computed using SMOS derived root zone soil moisture (RZSM) monthly fields. The concept is to consider 13 years of SMOS data (2010-2022). The RZSM monthly mean and max over the period is iused to compute a soil water deficit to remove seasonal variability. from teh soil water deficit a soil moisture drought index is computed .The range of values for SMDI lies between -4 to +4, with -4 representing extreme dry conditions and +4 representing extreme wet conditions.

This product displays for Tributyltin, positions with values counts that have been measured per matrix for each year and are present in EMODnet regional contaminants aggregated datasets, v2022. The product displays positions for every available year.