2023
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Species distribution models (GAM, Maxent, and Random Forest ensemble) predicting the distribution of Sea pens and burrowing megafauna assemblages in the Northeast Atlantic. This community is considered ecologically coherent according to the cluster analysis conducted by Parry et al. (2015) on image samples. Modeling its distribution complements existing work on their definition and offers a representation of the extent of the areas of the North East Atlantic where they can occur based on the best available knowledge. This work was performed at the University of Plymouth in 2021.
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Compilation of published ocean drilling (DSDP, ODP and IODP) records of sedimentation rates, CaCO3, opal and terrigenous accumulation rates that cover the late Miocene and early Pliocene interval. We compiled oceanographic data from DSDP, ODP and IODP expeditions that cover the late Miocene and early Pliocene. Data mining was performed by automatically collecting the Pangaea datasets that correspond to the selected time interval and that have at least one of the following variables: sedimentation rate, dry bulk density, mass accumulation rate (MAR), CaCO3 accumulation rate, bSiO2 accumulation rate (biogenic SiO2) , %CaCO3, %bSiO2. The compilation was then improved by manually adding datasets absent from Pangaea but relevant to our study. The data compilation contains 154 datasets (122 are from Pangaea) from 118 different ocean drilling sites. Age-depth models have been calibrated to the GTS2020 time scale in order to perform a temporal comparison of the datasets. This step was performed using the Neptune Sandbox Berlin database (Renaudie et al. 2020, Palaeontologia Electronica, DOI:10.26879/1032). The Meta_Data_Table file is a metadata table with the following information : site number, dataset label, site label, publication, elevation, site coordinates, site paleocoordinates (10 Ma), available variables, variables used for labeling, the time scale used in the original publication, and the web link to the original dataset. The Time_series file is a file that contains the time series of all the variables in all the data sets in this repository. Each file (.csv) contains a dataset and includes the following information: - Site number - Original link of the dataset - Citation - List of ages - List of values for each variable
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'''This product has been archived''' This dataset provide a times series of gap free map of Sea Surface Temperature (SST) foundation at high resolution on a 0.10 x 0.10 degree grid (approximately 10 x 10 km) for the Global Ocean, every 24 hours. Whereas along swath observation data essentially represent the skin or sub-skin SST, the Level 4 SST product is defined to represent the SST foundation (SSTfnd). SSTfnd is defined within GHRSST as the temperature at the base of the diurnal thermocline. It is so named because it represents the foundation temperature on which the diurnal thermocline develops during the day. SSTfnd changes only gradually along with the upper layer of the ocean, and by definition it is independent of skin SST fluctuations due to wind- and radiation-dependent diurnal stratification or skin layer response. It is therefore updated at intervals of 24 hrs. SSTfnd corresponds to the temperature of the upper mixed layer which is the part of the ocean represented by the top-most layer of grid cells in most numerical ocean models. It is never observed directly by satellites, but it comes closest to being detected by infrared and microwave radiometers during the night, when the previous day's diurnal stratification can be assumed to have decayed. The processing combines the observations of multiple polar orbiting and geostationary satellites, embedding infrared of microwave radiometers. All these sources are intercalibrated with each other before merging. A ranking procedure is used to select the best sensor observation for each grid point. An optimal interpolation is used to fill in where observations are missing. '''DOI (product) :''' https://doi.org/10.48670/mds-00321
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'''Short description:''' Altimeter satellite along-track sea surface heights anomalies (SLA) computed with respect to a twenty-year [1993, 2012] mean with a 1Hz (~7km) and 5Hz (~1km) sampling. It serves in near-real time applications. This product is processed by the DUACS multimission altimeter data processing system. It processes data from all altimeter missions available (e.g. Sentinel-6A, Jason-3, Sentinel-3A, Sentinel-3B, Saral/AltiKa, Cryosat-2, HY-2B). The system exploits the most recent datasets available based on the enhanced OGDR/NRT+IGDR/STC production. All the missions are homogenized with respect to a reference mission. Part of the processing is fitted to the European Seas. (see QUID document or http://duacs.cls.fr [http://duacs.cls.fr] pages for processing details). The product gives additional variables (e.g. Mean Dynamic Topography, Dynamic Atmospheric Correction, Ocean Tides, Long Wavelength Errors) that can be used to change the physical content for specific needs (see PUM document for details) '''Associated products''' A time invariant product http://marine.copernicus.eu/services-portfolio/access-to-products/?option=com_csw&view=details&product_id=SEALEVEL_GLO_PHY_NOISE_L4_STATIC_008_033 [http://marine.copernicus.eu/services-portfolio/access-to-products/?option=com_csw&view=details&product_id=SEALEVEL_GLO_PHY_NOISE_L4_STATIC_008_033] describing the noise level of along-track measurements is available. It is associated to the sla_filtered variable. It is a gridded product. One file is provided for the global ocean and those values must be applied for Arctic and Europe products. For Mediterranean and Black seas, one value is given in the QUID document. '''DOI (product) :''' https://doi.org/10.48670/moi-00140
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Seawater samples (500 mL) were taken during the PIRATA FR-32 cruise to measure surface inorganic carbon and alkalinity. The analyses were realised by potentiometric titration using a closed-cell at the SNAPO-CO2, LOCEAN in Paris.
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This visualization product displays the marine litter material categories percentage per trawl. EMODnet Chemistry included the collection of marine litter in its 3rd phase. Since the beginning of 2018, data of seafloor litter collected by international fish-trawl surveys have been gathered and processed in the EMODnet Chemistry Marine Litter Database (MLDB). The harmonization of all the data has been the most challenging task considering the heterogeneity of the data sources, sampling protocols (OSPAR and MEDITS protocols) and reference lists used on a European scale. Moreover, within the same protocol, different gear types are deployed during fishing bottom trawl surveys. Unlike other EMODnet seafloor litter products, all trawls surveyed since 2007 are included in this map even if the wingspread and/or the distance are unknown. Only surveys with an unknown number of items were excluded from this product. Harmonization of the material categories between ICES and MEDITS lists has been performed and the following calculation has been applied: Material % = (∑Number of items of each material category*100)/(∑Number of items of all material categories) More information on data processing and calculation are detailed in the document attached. Warning: the absence of data on the map doesn't necessarily mean that they don't exist, but that no information has been entered in the Marine Litter Database for this area.
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Comparison between 3 kits, Roche, Twist Biosciences and Illumina on the ability to enrich environmental samples to viral sequences. 5 sewage samples were extracted in triplicats with selective extraction protocol.
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Water body ammonium - Monthly Climatology for the European Seas for the period 1960-2020 on the domain from longitude -45.0 to 70.0 degrees East and latitude 24.0 to 83.0 degrees North. Data Sources: observational data from SeaDataNet/EMODnet Chemistry Data Network. Description of DIVA analysis: The computation was done with the DIVAnd (Data-Interpolating Variational Analysis in n dimensions), version 2.7.9, using GEBCO 30sec topography for the spatial connectivity of water masses. Horizontal correlation length and vertical correlation length vary spatially depending on the topography and domain. Depth range: 0.0, 5.0, 10.0, 15.0, 20.0, 25.0, 30.0, 35.0, 40.0, 45.0, 50.0, 55.0, 60.0, 65.0, 70.0, 75.0, 80.0, 85.0, 90.0, 95.0, 100.0, 125.0, 150.0, 175.0, 200.0, 225.0, 250.0, 275.0, 300.0, 325.0, 350.0, 375.0, 400.0, 425.0, 450.0, 475.0, 500.0, 550.0, 600.0, 650.0, 700.0, 750.0, 800.0, 850.0, 900.0, 950.0, 1000.0, 1050.0, 1100.0, 1150.0, 1200.0, 1250.0, 1300.0, 1350.0, 1400.0, 1450.0, 1500.0, 1550.0, 1600.0, 1650.0, 1700.0, 1750.0, 1800.0, 1850.0, 1900.0, 1950.0, 2000.0, 2100.0, 2200.0, 2300.0, 2400.0, 2500.0, 2600.0, 2700.0, 2800.0, 2900.0, 3000.0, 3100.0, 3200.0, 3300.0, 3400.0, 3500.0, 3600.0, 3700.0, 3800.0, 3900.0, 4000.0, 4100.0, 4200.0, 4300.0, 4400.0, 4500.0, 4600.0, 4700.0, 4800.0, 4900.0, 5000.0, 5100.0, 5200.0, 5300.0, 5400.0, 5500.0 m. Units: umol/l. The horizontal resolution of the produced DIVAnd analysis is 0.25 degrees.
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This visualization product displays the number of Marine Strategy Framework Directive (MSFD) monitoring surveys and the associated temporal coverage per beach. EMODnet Chemistry included the collection of marine litter in its 3rd phase. Since the beginning of 2018, data of beach litter have been gathered and processed in the EMODnet Chemistry Marine Litter Database (MLDB). The harmonization of all the data has been the most challenging task considering the heterogeneity of the data sources, sampling protocols and reference lists used on a European scale. Preliminary processing were necessary to harmonize all the data: - Exclusion of OSPAR 1000 protocol: in order to follow the approach of OSPAR that it is not including these data anymore in the monitoring; - Selection of MSFD surveys only (exclusion of other monitoring, cleaning and research operations); - Exclusion of beaches without coordinates. More information is available in the attached documents. Warning: the absence of data on the map doesn't necessarily mean that they don't exist, but that no information has been entered in the Marine Litter Database for this area.
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This product displays for Cadmium, median values of the last 6 available years that have been measured per matrix and are present in EMODnet regional contaminants aggregated datasets, v2022. The median values ranges are derived from the following percentiles: 0-25%, 25-75%, 75-90%, >90%. Only "good data" are used, namely data with Quality Flag=1, 2, 6, Q (SeaDataNet Quality Flag schema). For water, only surface values are used (0-15 m), for sediment and biota data at all depths are used.
Catalogue PIGMA