2023
Type of resources
Available actions
Topics
Keywords
Contact for the resource
Provided by
Years
Formats
Representation types
Update frequencies
status
Scale
Resolution
-
Metabarcoding data were produced based on samples gathered at Ifremer where the DNA was extracted; PCR libraries were built at Ifremer and Genseq; libraries were sequenced at Novogene. The data to download contain: 1/d emultiplexed raw data, 2/ metadata, and 3) Scripts to process data and taxonomically assign DNA sequences 4) Rmarkdown to analyze communities.
-
This product displays for Tributyltin, positions with values counts that have been measured per matrix for each year and are present in EMODnet regional contaminants aggregated datasets, v2022. The product displays positions for every available year.
-
This visualization product displays the color of litter in percent per net per year from specific protocols different from research and monitoring protocols. EMODnet Chemistry included the collection of marine litter in its 3rd phase. Before 2021, there was no coordinated effort at the regional or European scale for micro-litter. Given this situation, EMODnet Chemistry proposed to adopt the data gathering and data management approach as generally applied for marine data, i.e., populating metadata and data in the CDI Data Discovery and Access service using dedicated SeaDataNet data transport formats. EMODnet Chemistry is currently the official EU collector of micro-litter data from Marine Strategy Framework Directive (MSFD) National Monitoring activities (descriptor 10). A series of specific standard vocabularies or standard terms related to micro-litter have been added to SeaDataNet NVS (NERC Vocabulary Server) Common Vocabularies to describe the micro-litter. European micro-litter data are collected by the National Oceanographic Data Centres (NODCs). Micro-litter map products are generated from NODCs data after a test of the aggregated collection including data and data format checks and data harmonization. A filter is applied to represent only micro-litter sampled according to a very specific protocol such as the Volvo Ocean Race (VOR) or Oceaneye. To calculate percentages for each color, formula applied is: Color (%) = (∑number of particles of each color)*100 / (∑number of particles of all color) When the number of microlitters was not filled or zero, the percentage could not be calculated. Standard vocabularies for microliter colors are taken from Seadatanet's H04 library (https://vocab.seadatanet.org/v_bodc_vocab_v2/search.asp?lib=H04) Warning: the absence of data on the map doesn't necessarily mean that they don't exist, but that no information has been entered in the National Oceanographic Data Centre (NODC) for this area.
-
This product displays for Benzo(a)pyrene, positions with percentages of all available data values per group of animals that are present in EMODnet regional contaminants aggregated datasets, v2022. The product displays positions for all available years.
-
This product displays for Mercury, positions with values counts that have been measured per matrix for each year and are present in EMODnet regional contaminants aggregated datasets, v2022. The product displays positions for every available year.
-
Classification of the seabed in the Atlantic Ocean into broad-scale benthic habitats employing a non-hierarchical top-down clustering approach aimed at informing Marine Spatial Planning. This work was performed at the University of Plymouth in 2021 with data provided by a wide group of partners representing the nations surrounding the Atlantic Ocean. It classifies continuous environmental data into discrete classes that can be compared to observed biogeographical patterns at various scales. It has 3 levels of classification. The numbers in the raster layer correspond to individual classes. Description of these classes is given in McQuaid, K.A. et al. (2023).
-
This dataset gathers data used to infer the trophic structure and functioning of fish assemblages in the Eastern English Channel, the Bay of Biscay and the Gulf of Lions : - Biomass data, resulting from accoustic monitoring for pelagic species, or bottom trawling for demersal species, after extrapolation based on stratification scheme - Individual C and N isotopic ratios, length and mass, for all individuals considered - Individual energetic density values
-
This visualization product displays the density of seafloor litter per trawl. EMODnet Chemistry included the collection of marine litter in its 3rd phase. Since the beginning of 2018, data of seafloor litter collected by international fish-trawl surveys have been gathered and processed in the EMODnet Chemistry Marine Litter Database (MLDB). The harmonization of all the data has been the most challenging task considering the heterogeneity of the data sources, sampling protocols (OSPAR and MEDITS protocols) and reference lists used on a European scale. Moreover, within the same protocol, different gear types are deployed during fishing bottom trawl surveys. In cases where the wingspread and/or number of items were unknown, data could not be used because these fields are needed to calculate the density. Data collected before 2011 are affected by this filter. When the distance reported in the data was null, it was calculated from: - the ground speed and the haul duration using this formula: Distance (km) = Haul duration (h) * Ground speed (km/h); - the trawl coordinates if the ground speed and the haul duration were not filled in. The swept area is calculated from the wingspread (which depends on the fishing gear type) and the distance trawled: Swept area (km²) = Distance (km) * Wingspread (km) Densities have been calculated on each trawl and year using the following computation: Density (number of items per km²) = ∑Number of items / Swept area (km²) Percentiles 50, 75, 95 & 99 have been calculated taking into account data for all years. More information on data processing and calculation are detailed in the document attached. Warning: the absence of data on the map doesn't necessarily mean that they don't exist, but that no information has been entered in the Marine Litter Database for this area.
-
This product displays for Lead, positions with percentages of all available data values per group of animals that are present in EMODnet regional contaminants aggregated datasets, v2022. The product displays positions for all available years.
-
This product displays for Lead, median values of the last 6 available years that have been measured per matrix and are present in EMODnet regional contaminants aggregated datasets, v2022. The median values ranges are derived from the following percentiles: 0-25%, 25-75%, 75-90%, >90%. Only "good data" are used, namely data with Quality Flag=1, 2, 6, Q (SeaDataNet Quality Flag schema). For water, only surface values are used (0-15 m), for sediment and biota data at all depths are used.
Catalogue PIGMA