2023
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Species distribution models (GAM, Maxent and Random Forest ensemble) predicting the distribution of Solitary Scleractinian fields assemblage in the Celtic Sea. This community is considered ecologically coherent according to the cluster analysis conducted by Parry et al. (2015) on image sample. Modelling its distribution complements existing work on their definition and offers a representation of the extent of the areas of the north-east Atlantic where they can occur based on the best available knowledge. This work was performed at the University of Plymouth in 2021.
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This dataset gathers data used to infer the trophic structure and functioning of fish assemblages in the Eastern English Channel, the Bay of Biscay and the Gulf of Lions : - Biomass data, resulting from accoustic monitoring for pelagic species, or bottom trawling for demersal species, after extrapolation based on stratification scheme - Individual C and N isotopic ratios, length and mass, for all individuals considered - Individual energetic density values
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This product displays for Hexachlorobenzene, positions with percentages of all available data values per group of animals that are present in EMODnet regional contaminants aggregated datasets, v2022. The product displays positions for all available years.
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'''DEFINITION''' The indicator of the Kuroshio extension phase variations is based on the standardized high frequency altimeter Eddy Kinetic Energy (EKE) averaged in the area 142-149°E and 32-37°N and computed from the DUACS delayed-time (CMEMS SEALEVEL_GLO_PHY_L4_MY_008_047) and near real-time (CMEMS SEALEVEL_GLO_PHY_L4_NRT _008_046) altimeter sea level gridded products. ""CONTEXT"" The Kuroshio Extension is an eastward-flowing current in the subtropical western North Pacific after the Kuroshio separates from the coast of Japan at 35°N, 140°E. Being the extension of a wind-driven western boundary current, the Kuroshio Extension is characterized by a strong variability and is rich in large-amplitude meanders and energetic eddies (Niiler et al., 2003; Qiu, 2003, 2002). The Kuroshio Extension region has the largest sea surface height variability on sub-annual and decadal time scales in the extratropical North Pacific Ocean (Jayne et al., 2009; Qiu and Chen, 2010, 2005). Prediction and monitoring of the path of the Kuroshio are of huge importance for local economies as the position of the Kuroshio extension strongly determines the regions where phytoplankton and hence fish are located. Unstable (contracted) phase of the Kuroshio enhance the production of Chlorophyll (Lin et al., 2014). ""CMEMS KEY FINDINGS"" The different states of the Kuroshio extension phase have been presented and validated by (Bessières et al., 2013) and further reported by Drévillon et al. (2018) in the Copernicus Ocean State Report #2. Two rather different states of the Kuroshio extension are observed: an ‘elongated state’ (also called ‘strong state’) corresponding to a narrow strong steady jet, and a ‘contracted state’ (also called ‘weak state’) in which the jet is weaker and more unsteady, spreading on a wider latitudinal band. When the Kuroshio Extension jet is in a contracted (elongated) state, the upstream Kuroshio Extension path tends to become more (less) variable and regional eddy kinetic energy level tends to be higher (lower). In between these two opposite phases, the Kuroshio extension jet has many intermediate states of transition and presents either progressively weakening or strengthening trends. In 2018, the indicator reveals an elongated state followed by a weakening neutral phase since then. '''DOI (product):''' https://doi.org/10.48670/moi-00222
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This product displays for Mercury, positions with values counts that have been measured per matrix for each year and are present in EMODnet regional contaminants aggregated datasets, v2022. The product displays positions for every available year.
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Sequenced samples are city center wastewater sampled by passive samplers. Variants are identified by Illumina Miseq sequencing.
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This visualization product displays the total abundance of marine macro-litter (> 2.5cm) per beach, per 100m & to 1 survey aggregated over the period 2001 to 2020 from Marine Strategy Framework Directive (MSFD) monitoring surveys. EMODnet Chemistry included the collection of marine litter in its 3rd phase. Since the beginning of 2018, data of beach litter have been gathered and processed in the EMODnet Chemistry Marine Litter Database (MLDB). The harmonization of all the data has been the most challenging task considering the heterogeneity of the data sources, sampling protocols and reference lists used on a European scale. Preliminary processing were necessary to harmonize all the data: - Exclusion of OSPAR 1000 protocol: in order to follow the approach of OSPAR that it is not including these data anymore in the monitoring; - Selection of MSFD surveys only (exclusion of other monitoring, cleaning and research operations); - Exclusion of beaches without coordinates; - Some categories & some litter types like organic litter, small fragments (paraffin and wax; items > 2.5cm) and pollutants have been removed. The list of selected items is attached to this metadata (total abundance list). This list was created using EU Marine Beach Litter Baselines and EU Threshold Value for Macro Litter on Coastlines from JRC (these two documents are attached to this metadata); - Normalization of survey lengths to 100m & 1 survey / year: in some cases, the survey length was not exactly 100m, so in order to be able to compare the abundance of litter from different beaches a normalization is applied using this formula: Number of items (normalized by 100 m) = Number of litter per items x (100 / survey length) Then, this normalized number of items is summed to obtain the total normalized number of litter for each survey. Finally, a median is calculated over the entire period among all these total numbers of litter per 100m calculated for each survey. Sometimes the survey length was null or equal to 0. Assuming that the MSFD protocol has been applied, the length has been set at 100m in these cases. The size of each circle on this map increases with the calculated median number of marine litter per beach, per 100m & to 1 survey. The median litter abundance values displayed in the legend correspond to the 50 and 99 percentiles and the maximum value. More information is available in the attached documents. Warning: - the absence of data on the map doesn't necessarily mean that they don't exist, but that no information has been entered in the Marine Litter Database for this area. - This map was created to give an idea of the distribution of beach litter between 2001 and 2021 in a synthetic manner. NOT ALL BEACHES MAY HAVE DATA FOR THE ENTIRE PERIOD, SO IT IS NOT POSSIBLE TO MAKE A COMPARISON BETWEEN BEACHES.
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This visualization product displays beaches locations where non-MSFD monitoring surveys, research & cleaning operations have been applied to collate data on macrolitter (> 2.5 cm). Reference lists associated with these protocols have been indicated with different colors in the map. EMODnet Chemistry included the collection of marine litter in its 3rd phase. Since the beginning of 2018, data of beach litter have been gathered and processed in the EMODnet Chemistry Marine Litter Database (MLDB). The harmonization of all the data has been the most challenging task considering the heterogeneity of the data sources, sampling protocols and reference lists used on a European scale. Preliminary processing were necessary to harmonize all the data: - Exclusion of OSPAR 1000 protocol: in order to follow the approach of OSPAR that it is not including these data anymore in the monitoring; - Selection of surveys from non-MSFD monitoring, cleaning and research operations; - Exclusion of beaches without coordinates; - Some categories & some litter types like organic litter, small fragments (paraffin and wax; items > 2.5cm) and pollutants have been removed. The list of selected items is attached to this metadata. This list was created using EU Marine Beach Litter Baselines and EU Threshold Value for Macro Litter on Coastlines from JRC (these two documents are attached to this metadata). More information is available in the attached documents. Warning: the absence of data on the map doesn't necessarily mean that they don't exist, but that no information has been entered in the Marine Litter Database for this area.
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Metabarcoding data were produced based on samples gathered at Ifremer where the DNA was extracted; PCR libraries were built at Ifremer and Genseq; libraries were sequenced at Novogene. The data to download contain: 1/d emultiplexed raw data, 2/ metadata, and 3) Scripts to process data and taxonomically assign DNA sequences 4) Rmarkdown to analyze communities.
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This visualization product displays the plastic bags abundance of marine macro-litter (> 2.5cm) per beach per year from non-MSFD monitoring surveys, research & cleaning operations. EMODnet Chemistry included the collection of marine litter in its 3rd phase. Since the beginning of 2018, data of beach litter have been gathered and processed in the EMODnet Chemistry Marine Litter Database (MLDB). The harmonization of all the data has been the most challenging task considering the heterogeneity of the data sources, sampling protocols and reference lists used on a European scale. Preliminary processing were necessary to harmonize all the data: - Exclusion of OSPAR 1000 protocol: in order to follow the approach of OSPAR that it is not including these data anymore in the monitoring; - Selection of surveys from non-MSFD monitoring, cleaning and research operations; - Exclusion of beaches without coordinates; - Selection of plastic bags related items only. The list of selected items is attached to this metadata. This list was created using EU Marine Beach Litter Baselines and EU Threshold Value for Macro Litter on Coastlines from JRC (these two documents are attached to this metadata); - Exclusion of surveys without associated length; - Normalization of survey lengths to 100m & 1 survey / year: in some case, the survey length was not 100m, so in order to be able to compare the abundance of litter from different beaches a normalization is applied using this formula: Number of plastic bags related items of the survey (normalized by 100 m) = Number of plastic bags related items of the survey x (100 / survey length) Then, this normalized number of plastic bags related items is summed to obtain the total normalized number of plastic bags related items for each survey. Finally, the median abundance of plastic bags related items for each beach and year is calculated from these normalized abundances of plastic bags related items per survey. Percentiles 50, 75, 95 & 99 have been calculated taking into account plastic bags related items from other sources data for all years. More information is available in the attached documents. Warning: the absence of data on the map doesn't necessarily mean that they don't exist, but that no information has been entered in the Marine Litter Database for this area.
Catalogue PIGMA