Comparison between 3 kits, Roche, Twist Biosciences and Illumina on the ability to enrich environmental samples to viral sequences. 5 sewage samples were extracted in triplicats with selective extraction protocol.

This visualization product displays plastic bags density per trawl. EMODnet Chemistry included the collection of marine litter in its 3rd phase. Since the beginning of 2018, data of seafloor litter collected by international fish-trawl surveys have been gathered and processed in the EMODnet Chemistry Marine Litter Database (MLDB). The harmonization of all the data has been the most challenging task considering the heterogeneity of the data sources, sampling protocols (OSPAR and MEDITS protocols) and reference lists used on a European scale. Moreover, within the same protocol, different gear types are deployed during fishing bottom trawl surveys. In cases where the wingspread and/or number of items were unknown, data could not be used because these fields are needed to calculate the density. Data collected before 2011 are affected by this filter. When the distance reported in the data was null, it was calculated from: - the ground speed and the haul duration using this formula: Distance (km) = Haul duration (h) * Ground speed (km/h); - the trawl coordinates if the ground speed and the haul duration were not filled in. The swept area is calculated from the wingspread (which depends on the fishing gear type) and the distance trawled: Swept area (km²) = Distance (km) * Wingspread (km) Densities have been calculated on each trawl and year using the following computation: Density of plastic bags (number of items per km²) = ∑Number of plastic bags related items / Swept area (km²) Percentiles 50, 75, 95 & 99 have been calculated taking into account data for all years. The list of selected items for this product is attached to this metadata. Information on data processing and calculation is detailed in the attached methodology document. Warning: the absence of data on the map doesn't necessarily mean that they don't exist, but that no information has been entered in the Marine Litter Database for this area.

In this study, we examined the capacity of two bi-parental progenies of the black-lip pearl oyster, Pinctada margaritifera, to increase their later-life thermal tolerance and performance, through developmental thermal priming. Embryos (3-24 hours post-fertilization) were incubated until hatching at either control (28°C; naive) or warm (32°C; primed; ecological extremes) temperatures, and raised four months under common conditions at 28°C.

'''This product has been archived''' This dataset provide a times series of gap free map of Sea Surface Temperature (SST) foundation at high resolution on a 0.10 x 0.10 degree grid (approximately 10 x 10 km) for the Global Ocean, every 24 hours. Whereas along swath observation data essentially represent the skin or sub-skin SST, the Level 4 SST product is defined to represent the SST foundation (SSTfnd). SSTfnd is defined within GHRSST as the temperature at the base of the diurnal thermocline. It is so named because it represents the foundation temperature on which the diurnal thermocline develops during the day. SSTfnd changes only gradually along with the upper layer of the ocean, and by definition it is independent of skin SST fluctuations due to wind- and radiation-dependent diurnal stratification or skin layer response. It is therefore updated at intervals of 24 hrs. SSTfnd corresponds to the temperature of the upper mixed layer which is the part of the ocean represented by the top-most layer of grid cells in most numerical ocean models. It is never observed directly by satellites, but it comes closest to being detected by infrared and microwave radiometers during the night, when the previous day's diurnal stratification can be assumed to have decayed. The processing combines the observations of multiple polar orbiting and geostationary satellites, embedding infrared of microwave radiometers. All these sources are intercalibrated with each other before merging. A ranking procedure is used to select the best sensor observation for each grid point. An optimal interpolation is used to fill in where observations are missing. '''DOI (product) :''' https://doi.org/10.48670/mds-00321

'''DEFINITION''' The sea level ocean monitoring indicator has been presented in the Copernicus Ocean State Report #8. The ocean monitoring indicator of regional mean sea level is derived from the DUACS delayed-time (DT-2024 version, “my” (multi-year) dataset used when available) sea level anomaly maps from satellite altimetry based on a stable number of altimeters (two) in the satellite constellation. These products are distributed by the Copernicus Climate Change Service and the Copernicus Marine Service (SEALEVEL_GLO_PHY_CLIMATE_L4_MY_008_057). The time series of area averaged anomalies correspond to the area average of the maps in the Mediterranean Sea weighted by the cosine of the latitude (to consider the changing area in each grid with latitude) and by the proportion of ocean in each grid (to consider the coastal areas). The time series are corrected from regional mean GIA correction (weighted GIA mean of a 27 ensemble model following Spada et Melini, 2019). The time series are adjusted for seasonal annual and semi-annual signals and low-pass filtered at 6 months. Then, the trends/accelerations are estimated on the time series using ordinary least square fit.The trend uncertainty is provided in a 90% confidence interval. It is calculated as the weighted mean uncertainties in the region from Prandi et al., 2021. This estimate only considers errors related to the altimeter observation system (i.e., orbit determination errors, geophysical correction errors and inter-mission bias correction errors). The presence of the interannual signal can strongly influence the trend estimation considering to the period considered (Wang et al., 2021; Cazenave et al., 2014). The uncertainty linked to this effect is not considered. ""CONTEXT"" Change in mean sea level is an essential indicator of our evolving climate, as it reflects both the thermal expansion of the ocean in response to its warming and the increase in ocean mass due to the melting of ice sheets and glaciers (WCRP Global Sea Level Budget Group, 2018). At regional scale, sea level does not change homogenously. It is influenced by various other processes, with different spatial and temporal scales, such as local ocean dynamic, atmospheric forcing, Earth gravity and vertical land motion changes (IPCC WGI, 2021). The adverse effects of floods, storms and tropical cyclones, and the resulting losses and damage, have increased as a result of rising sea levels, increasing people and infrastructure vulnerability and food security risks, particularly in low-lying areas and island states (IPCC, 2022a). Adaptation and mitigation measures such as the restoration of mangroves and coastal wetlands, reduce the risks from sea level rise (IPCC, 2022b). Beside a clear long-term trend, the regional mean sea level variation in the Mediterranean Sea shows an important interannual variability, with a high trend observed between 1993 and 1999 (nearly 8.4 mm/y) and relatively lower values afterward (nearly 2.4 mm/y between 2000 and 2022). This variability is associated with a variation of the different forcing. Steric effect has been the most important forcing before 1999 (Fenoglio-Marc, 2002; Vigo et al., 2005). Important change of the deep-water formation site also occurred in the 90’s. Their influence contributed to change the temperature and salinity property of the intermediate and deep water masses. These changes in the water masses and distribution is also associated with sea surface circulation changes, as the one observed in the Ionian Sea in 1997-1998 (e.g. Gačić et al., 2011), under the influence of the North Atlantic Oscillation (NAO) and negative Atlantic Multidecadal Oscillation (AMO) phases (Incarbona et al., 2016). These circulation changes may also impact the sea level trend in the basin (Vigo et al., 2005). In 2010-2011, high regional mean sea level has been related to enhanced water mass exchange at Gibraltar, under the influence of wind forcing during the negative phase of NAO (Landerer and Volkov, 2013).The relatively high contribution of both sterodynamic (due to steric and circulation changes) and gravitational, rotational, and deformation (due to mass and water storage changes) after 2000 compared to the [1960, 1989] period is also underlined by (Calafat et al., 2022). ""KEY FINDINGS"" Over the [1999/02/20 to 2025/10/18] period, the area-averaged sea level in the Mediterranean Sea rises at a rate of 3.7 ± 0.8 mm/yr with an acceleration of 0.16 ± 0.06 mm/yr². This trend estimation is based on the altimeter measurements corrected from regional GIA correction (Spada et Melini, 2019) to consider the ongoing movement of land. The TOPEX-A is no longer included in the computation of regional mean sea level parameters (trend and acceleration) with version 2024 products due to potential drifts, and ongoing work aims to develop a new empirical correction. Calculation begins in February 1999 (the start of the TOPEX-B period). '''DOI (product):''' https://doi.org/10.48670/moi-00264

Seawater samples (500 mL) were taken during the PIRATA FR-32 cruise to measure surface inorganic carbon and alkalinity. The analyses were realised by potentiometric titration using a closed-cell at the SNAPO-CO2, LOCEAN in Paris.

This product displays for Tributyltin, median values of the last 6 available years that have been measured per matrix and are present in EMODnet regional contaminants aggregated datasets, v2022. The median values ranges are derived from the following percentiles: 0-25%, 25-75%, 75-90%, >90%. Only "good data" are used, namely data with Quality Flag=1, 2, 6, Q (SeaDataNet Quality Flag schema). For water, only surface values are used (0-15 m), for sediment and biota data at all depths are used.

Species distribution models (GAM, Maxent and Random Forest ensemble) predicting the distribution of Solitary Scleractinian fields assemblage in the Celtic Sea. This community is considered ecologically coherent according to the cluster analysis conducted by Parry et al. (2015) on image sample. Modelling its distribution complements existing work on their definition and offers a representation of the extent of the areas of the north-east Atlantic where they can occur based on the best available knowledge. This work was performed at the University of Plymouth in 2021.

This product displays for Benzo(a)pyrene, positions with percentages of all available data values per group of animals that are present in EMODnet regional contaminants aggregated datasets, v2022. The product displays positions for all available years.

This visualization product displays nets locations where specific protocols have been applied to collate data on microlitter. Mesh size used with these protocols have been indicated with different colors in the map. EMODnet Chemistry included the collection of marine litter in its 3rd phase. Before 2021, there was no coordinated effort at the regional or European scale for micro-litter. Given this situation, EMODnet Chemistry proposed to adopt the data gathering and data management approach as generally applied for marine data, i.e., populating metadata and data in the CDI Data Discovery and Access service using dedicated SeaDataNet data transport formats. EMODnet Chemistry is currently the official EU collector of micro-litter data from Marine Strategy Framework Directive (MSFD) National Monitoring activities (descriptor 10). A series of specific standard vocabularies or standard terms related to micro-litter have been added to SeaDataNet NVS (NERC Vocabulary Server) Common Vocabularies to describe the micro-litter. European micro-litter data are collected by the National Oceanographic Data Centres (NODCs). Micro-litter map products are generated from NODCs data after a test of the aggregated collection including data and data format checks and data harmonization. A filter is applied to represent only micro-litter sampled according to a very specific protocol such as the Volvo Ocean Race (VOR) or Oceaneye. Warning: the absence of data on the map doesn't necessarily mean that they don't exist, but that no information has been entered in the National Oceanographic Data Centre (NODC) for this area.