2023
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The data sets presented here result from the long-term monitoring of individual growth patterns in anchovy and sardine in the Bay of Biscay, from 2000 to 2018. They derived from the PELGAS survey series (Doray et al., 2018), which monitors annually the Bay of Biscay pelagic ecosystem since 2000. The survey is performed in May during the peak spawning of anchovy and main spawning of sardine. Among the many data collected, anchovy and sardine populations are assessed by combining acoustic records with pelagic trawl hauls catches and ICES survey protocoles are used, as detailed in Doray et al. (2021). Briefly, fish acoustic backscatter are recorded along survey transect lines and pelagic trawl hauls undertaken opportunistically to identify echotraces to species and collect fish samples for acquiring biometric data. At each trawl haul and for each species, a random subsample of individuals is taken to establish the species’ length distributions. For anchovy and sardine, this subsample is further subsampled, spanning the whole length range, to take individual fish measurements. These amount to extracting otoliths and measuring individuals’ age, length, weight, sexual maturity and other parameters. Individual measurements are taken on fourty individuals of anchovy and sardine when the species are present in the catch. For each individual fish, the two otolith sagittae are extracted on board, mounted in leukit for age reading on board when permitting and/or on land in the laboratory. Growth patterns in the otoliths were analysed on land with a binocular stereomicroscope under reflected natural light. For anchovy, otoliths’ growth was measured for all individuals in all the hauls. For sardine, trawl hauls were selected and all individual otoliths were measured in each selected haul. The selection was made using the geographical stratification defined in Petitgas et al. (2018) based on the ecosystem spatial structure. An average of two to three hauls in each of the four strata were selected per year. The otoliths mounted in leukit were imaged and growth-at-age in the otoliths was measured with the software TNPC (Traitement numérique des pièces calcifiées: Mahé et al., 2009). Under the binocular microscope and natural light, the otoliths showed hyaline (aragonite-poor) rings corresponding to winter periods of low growth and between the rings, white opaque (aragonite-rich) portions corresponding to annual growth periods. The annual ring determination, the age assignment and the measurement of annual ring diameters followed ICES protocoles and guidelines for anchovy and sardine (ICES, 2010; 2011). The age was estimated as the number of hyaline rings. If the edge was hyaline, it was counted as a ring as a hyaline edge observed within the first half of the year is assumed to represent the last winter. The diameter of each annual ring was measured from middle of the hyaline ring on one side to the middle of the ring on the opposite side along the major elongated axis of the otolith and passing through its centre. The distance was expressed in mm after calibration of the stereomiscroscope and the pixel images. Such diameter corresponded to growth-at-age. Ages 0 to 4 were considered (diameters R1 to R5). The total diameter of the otolith was also measured. The data sets span 19 years, from 2000 to 2018 and comprise 20,186 and 8,624 individual fish analyzed at 535 and 235 trawl hauls for anchovy and sardine, respectively. These data sets were used by Boëns et al. (2021 and 2023) to analyse changes in growth patterns and growth-selective mortality at age in anchovy and sardine under environmental and fishing pressures. References: Doray, M., Boyra, G. and Van Der Kooij, J. (eds) (2021). ICES Survey Protocols – Manual for acoustic surveys coordinated under ICES Working Group on Acoustic and Egg Surveys for Small Pelagic Fish (WGACEGG). 1st Edition. ICES Techniques in Marine Environmental Sciences, 64. https://doi.org/10.17895/ices.pub.7462 Doray, M., Petitgas, P., Romagnan, J.-B., Huret, M., Duhamel, E., Dupuy, Ch., Spitz, J., Authier, M., Sanchez, F., Berger, L., Doremus, G., Bourriau, P., Grellier, P. and Masse, J. (2018). The PELGAS survey: ship-based integrated monitoring of the Bay of Biscay pelagic ecosystem. Progress In Oceanography, 166, 15-29. https://doi.org/10.1016/j.pocean.2017.09.015 ICES (2010). Report of the Workshop on Age reading of European anchovy (WKARA), 9-13 November 2009, Sicily, Italy. ICES CM 2009/ACOM: 43. 122 pp. https://doi.org/10.17895/ices.pub.19280525 ICES (2011). Report of the Workshop on Age Reading of European Atlantic Sardine (WKARAS), 14-18 February 2011, Lisbon, Portugal. ICES CM 2011/ACOM:42. 91 pp. https://doi.org/10.17895/ices.pub.19280855 Petitgas, P., Huret, M., Dupuy, Ch., Spitz, J., Authier, M., Romagnan, J.-B. and Doray, M. (2018). Ecosystem spatial structure revealed by integrated survey data. Progress In Oceanography, 166, 189-198. https://doi.org/10.1016/j.pocean.2017.09.012 Mahe, K., Bellail, R., Dufour, J.-L., Boiron-Leroy, A., Dimeet, J., Duhamel, E., Elleboode, R., Felix, J., Grellier, P., Huet, J., Labastie, J., Le Roy, D., Lizaud, O., Manten, M.-L., Martin, S., Metral, L., Nedelec, D., Verin, Y. and Badts, V. (2009). Synthèse française des procédures d'estimation d'âge / French summary of age estimation procedures. https://archimer.ifremer.fr/doc/00000/7294/ Boëns, A., Grellier, P., Lebigre, Ch. and Petitgas, P. (2021). Determinants of growth and selective mortality in anchovy and sardine in the Bay of Biscay. Fisheries Research, 239, 105947. https://doi.org/10.1016/j.fishres.2021.105947 Boëns, A., Ernande, B., Petitgas, P. and Lebigre, Ch. (2023). Different mechanisms underpin the decline in growth of anchovies and sardines of the Bay of Biscay. Evolutionary Applications, 16: 1393–1411. https://doi.org/10.1111/eva.13564
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This product displays for Benzo(a)pyrene, positions with values counts that have been measured per matrix for each year and are present in EMODnet regional contaminants aggregated datasets, v2022. The product displays positions for every available year.
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Moving 6-year analysis of Water body dissolved inorganic nitrogen in the NorthEast Atlantic for each season: - winter: January-March, - spring: April-June, - summer: July-September, - autumn: October-December. Every year of the time dimension corresponds to the 6-year centred average of each season. 6-year periods span from 1971/1976 until 2016/2021. Observation data span from 1971 to 2021. Depth levels (IODE standard depths): [0.0, 5.0, 10.0, 20.0, 30.0, 40.0, 50.0, 75.0, 100.0, 125.0, 150.0, 200.0, 250.0, 300.0, 400.0, 500.0, 600.0, 700.0, 800.0, 900.0, 1000.0, 1100.0, 1200.0, 1300.0, 1400.0, 1500.0, 1750.0, 2000.0]. Data sources: observational data from SeaDataNet/EMODNet Chemistry Data Network. Descrption of DIVAnd analysis: the computation was done with DIVAnd (Data-Interpolating Variational Analysis in n dimensions), version 2.7.4, using GEBCO 30 sec topography for the spatial connectivity of water masses. The horizontal resolution of the produced DIVAnd maps is 0.1 degrees. Horizontal correlation length varies from 400km in open sea regions to 50km at the coast. Vertical correlation length is defined as twice the vertical resolution. Signal-to-noise ratio was fixed to 1 for vertical profiles and 0.1 for time series to account for the redundancy in the time series observations. A logarithmic transformation (DIVAnd.Anam.loglin) was applied to the data prior to the analysis to avoid unrealistic negative values. Background field: a vertically-filtered profile of the seasonal data mean value (including all years) is substracted from the data. Detrending of data: no, advection constraint applied: no. Units: umol/l.
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This visualization product displays the location of all the surveys present in the EMODnet marine litter database (MLDB). The different fishing gears used are represented by different colors. EMODnet Chemistry included the collection of marine litter in its 3rd phase. Since the beginning of 2018, data of seafloor litter collected by international fish-trawl surveys have been gathered and processed in the EMODnet Chemistry Marine Litter Database (MLDB). The harmonization of all the data has been the most challenging task considering the heterogeneity of the data sources, sampling protocols (OSPAR and MEDITS protocols) and reference lists used on a European scale. Moreover, within the same protocol, different gear types are deployed during fishing bottom trawl surveys. Unlike other EMODnet seafloor litter products, all trawls surveyed since 2006 are included in this map even if the wingspread and/or the distance are unknown. Only surveys with an unknown number of items were excluded from this product. More information on data processing and calculation are detailed in the document attached. Warning: the absence of data on the map doesn't necessarily mean that they don't exist, but that no information has been entered in the Marine Litter Database for this area.
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This visualization product displays the type of litter in percent per net per year from specific protocols different from research and monitoring protocols. EMODnet Chemistry included the collection of marine litter in its 3rd phase. Before 2021, there was no coordinated effort at the regional or European scale for micro-litter. Given this situation, EMODnet Chemistry proposed to adopt the data gathering and data management approach as generally applied for marine data, i.e., populating metadata and data in the CDI Data Discovery and Access service using dedicated SeaDataNet data transport formats. EMODnet Chemistry is currently the official EU collector of micro-litter data from Marine Strategy Framework Directive (MSFD) National Monitoring activities (descriptor 10). A series of specific standard vocabularies or standard terms related to micro-litter have been added to SeaDataNet NVS (NERC Vocabulary Server) Common Vocabularies to describe the micro-litter. European micro-litter data are collected by the National Oceanographic Data Centres (NODCs). Micro-litter map products are generated from NODCs data after a test of the aggregated collection including data and data format checks and data harmonization. A filter is applied to represent only micro-litter sampled according to a very specific protocol such as the Volvo Ocean Race (VOR) or Oceaneye. To calculate percentages for each type, formula applied is: Type (%) = (∑number of particles of each type)*100 / (∑number of particles of all type) When the number of microlitters was not filled or zero, the percentage could not be calculated. Standard vocabularies for microliter types are taken from Seadatanet's H01 library (https://vocab.seadatanet.org/v_bodc_vocab_v2/search.asp?lib=H01) Warning: the absence of data on the map doesn't necessarily mean that they don't exist, but that no information has been entered in the National Oceanographic Data Centre (NODC) for this area.
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This visualization product displays the density of seafloor litter per trawl. EMODnet Chemistry included the collection of marine litter in its 3rd phase. Since the beginning of 2018, data of seafloor litter collected by international fish-trawl surveys have been gathered and processed in the EMODnet Chemistry Marine Litter Database (MLDB). The harmonization of all the data has been the most challenging task considering the heterogeneity of the data sources, sampling protocols (OSPAR and MEDITS protocols) and reference lists used on a European scale. Moreover, within the same protocol, different gear types are deployed during fishing bottom trawl surveys. In cases where the wingspread and/or number of items were unknown, data could not be used because these fields are needed to calculate the density. Data collected before 2011 are affected by this filter. When the distance reported in the data was null, it was calculated from: - the ground speed and the haul duration using this formula: Distance (km) = Haul duration (h) * Ground speed (km/h); - the trawl coordinates if the ground speed and the haul duration were not filled in. The swept area is calculated from the wingspread (which depends on the fishing gear type) and the distance trawled: Swept area (km²) = Distance (km) * Wingspread (km) Densities have been calculated on each trawl and year using the following computation: Density (number of items per km²) = ∑Number of items / Swept area (km²) Percentiles 50, 75, 95 & 99 have been calculated taking into account data for all years. More information on data processing and calculation are detailed in the document attached. Warning: the absence of data on the map doesn't necessarily mean that they don't exist, but that no information has been entered in the Marine Litter Database for this area.
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This visualization product displays the type of litter in percent per net per year from research and monitoring protocols. EMODnet Chemistry included the collection of marine litter in its 3rd phase. Before 2021, there was no coordinated effort at the regional or European scale for micro-litter. Given this situation, EMODnet Chemistry proposed to adopt the data gathering and data management approach as generally applied for marine data, i.e., populating metadata and data in the CDI Data Discovery and Access service using dedicated SeaDataNet data transport formats. EMODnet Chemistry is currently the official EU collector of micro-litter data from Marine Strategy Framework Directive (MSFD) National Monitoring activities (descriptor 10). A series of specific standard vocabularies or standard terms related to micro-litter have been added to SeaDataNet NVS (NERC Vocabulary Server) Common Vocabularies to describe the micro-litter. European micro-litter data are collected by the National Oceanographic Data Centres (NODCs). Micro-litter map products are generated from NODCs data after a test of the aggregated collection including data and data format checks and data harmonization. A filter is applied to represent only micro-litter sampled according to research and monitoring protocols as MSFD monitoring. To calculate percentages for each type, formula applied is: Type (%) = (∑number of particles of each type)*100 / (∑number of particles of all type) When the number of microlitters was not filled or zero, the percentage could not be calculated. Standard vocabularies for microliter types are taken from Seadatanet's H01 library (https://vocab.seadatanet.org/v_bodc_vocab_v2/search.asp?lib=H01) Warning: the absence of data on the map doesn't necessarily mean that they don't exist, but that no information has been entered in the National Oceanographic Data Centre (NODC) for this area.
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EMODnet Chemistry aims to provide access to marine chemistry data sets and derived data products concerning eutrophication, ocean acidification, contaminants and litter. The chosen parameters are relevant for the Marine Strategy Framework Directive (MSFD), in particular for descriptors 5, 8, 9 and 10. The dataset contains standardized, harmonized and validated data collections from beach litter (monitoring and other sources). Datasets concerning beach and seafloor litter data are loaded in a central database after a semi-automated validation phase. Once loaded, a data assessment is performed in order to check data consistency and potential errors are corrected thanks to a feedback loop with data originators. For beach litter, the harmonized datasets contain all unrestricted EMODnet Chemistry data on beach litter, including monitoring data, data from cleaning surveys and data from research. A relevant part of the monitoring data has been considered for assessment purposes by the European institutions and therefore is tagged as MSFD_monitoring. EMODnet beach litter data and databases are hosted and maintained by 'Istituto Nazionale di Oceanografia e di Geofisica Sperimentale, Division of Oceanography (OGS/NODC)' from Italy. Data are formatted following Guidelines and forms for gathering marine litter data, which can be found at: https://doi.org/10.6092/15c0d34c-a01a-4091-91ac-7c4f561ab508. The updated vocabularies of admitted values are available in https://nodc.ogs.it/marinelitter/vocab. The harmonized datasets can be downloaded as EMODnet Beach litter data format Version 7.0, which is a spreadsheet file composed of 4 sheets: beach metadata, survey metadata, animals and litter.
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'''DEFINITION''' The OMI_EXTREME_SL_NORTHWESTSHELF_slev_mean_and_anomaly_obs indicator is based on the computation of the 99th and the 1st percentiles from in situ data (observations). It is computed for the variable sea level measured by tide gauges along the coast. The use of percentiles instead of annual maximum and minimum values, makes this extremes study less affected by individual data measurement errors. The annual percentiles referred to annual mean sea level are temporally averaged and their spatial evolution is displayed in the dataset omi_extreme_sl_northwestshelf_slev_mean_and_anomaly_obs, jointly with the anomaly in the target year. This study of extreme variability was first applied to sea level variable (Pérez Gómez et al 2016) and then extended to other essential variables, sea surface temperature and significant wave height (Pérez Gómez et al 2018). '''CONTEXT''' Sea level (SLEV) is one of the Essential Ocean Variables most affected by climate change. Global mean sea level rise has accelerated since the 1990’s (Abram et al., 2019, Legeais et al., 2020), due to the increase of ocean temperature and mass volume caused by land ice melting (WCRP, 2018). Basin scale oceanographic and meteorological features lead to regional variations of this trend that combined with changes in the frequency and intensity of storms could also rise extreme sea levels up to one metre by the end of the century (Vousdoukas et al., 2020, Tebaldi et al., 2021). This will significantly increase coastal vulnerability to storms, with important consequences on the extent of flooding events, coastal erosion and damage to infrastructures caused by waves (Boumis et al., 2023). The increase in extreme sea levels over recent decades is, therefore, primarily due to the rise in mean sea level. Note, however, that the methodology used to compute this OMI removes the annual 50th percentile, thereby discarding the mean sea level trend to isolate changes in storminess. The North West Shelf area presents positive sea level trends with higher trend estimates in the German Bight and around Denmark, and lower trends around the southern part of Great Britain (Dettmering et al., 2021). '''COPERNICUS MARINE SERVICE KEY FINDINGS''' The completeness index criteria is fulfilled by 33 stations in 2023, one less than in 2022 (32). The mean 99th percentiles present a large spatial variability related to the tidal pattern, with largest values found in East England and at the entrance of the English channel, and lowest values along the Danish and Swedish coasts, ranging from the 3.08 m above mean sea level in Immingan (East England) to 0.45 m above mean sea level in Tregde (Norway). The standard deviation of annual 99th percentiles ranges between 2-3 cm in the western part of the region (e.g.: 2 cm in Harwich, 3 cm in Dunkerke) and 7-8 cm in the eastern part and the Kattegat (e.g. 8 cm in Stenungsund, Sweden). The 99th percentile anomalies for 2023 show overall slightly negative values except in the Kattegat (Eastern part), with maximum significant values of +11 cm in Hornbaek (Denmark), and +10 cm in Ringhals (Sweden). '''DOI (product):''' https://doi.org/10.48670/moi-00272
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This visualization product displays the number of Marine Strategy Framework Directive (MSFD) monitoring surveys and the associated temporal coverage per beach. EMODnet Chemistry included the collection of marine litter in its 3rd phase. Since the beginning of 2018, data of beach litter have been gathered and processed in the EMODnet Chemistry Marine Litter Database (MLDB). The harmonization of all the data has been the most challenging task considering the heterogeneity of the data sources, sampling protocols and reference lists used on a European scale. Preliminary processing were necessary to harmonize all the data: - Exclusion of OSPAR 1000 protocol: in order to follow the approach of OSPAR that it is not including these data anymore in the monitoring; - Selection of MSFD surveys only (exclusion of other monitoring, cleaning and research operations); - Exclusion of beaches without coordinates. More information is available in the attached documents. Warning: the absence of data on the map doesn't necessarily mean that they don't exist, but that no information has been entered in the Marine Litter Database for this area.
Catalogue PIGMA