NC, NETCDF
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This dataset contains (1) outputs of Species Distribution Models (SDMs) for marine fish and (2) estimation of species richness using those outputs. SDMs use correlative algorithms to link presences of species to the environment recorded in place and time of their observation, calculate their environmental niche, estimate the geographical location suitable for them (habitat suitability) and in fine their geographical distribution. Here, we downloaded presences of marine fish from two open source databases, GBIF and OBIS and 13 environmental predictors known to be relevant in fish ecology (list below). We used the CEPHALOPOD pipeline, a framework allowing the user the compute a lot of species at the same time, with comparable methods and a verification of quality of inputs and outputs at every steps (Schickele et al., 2025). 3,642 fish made it to the final step and have the habitat suitability estimated for 12 month + annual mean, 10 bootstrap to quantify uncertainty and x algorithms. Those estimation are available in the “L2_marine_fish_*.nc” files, organized by water column position (bathydemersal, bathypelagic, benthopelagic, demersal, pelagic-neritic, pelagic-oceanic, reef-associated). We then used their annual mean to estimate their actual geographic distribution by applying (1) a bathymetric filtration and (2) a cutting procedure which removes isolated patches of high suitability (i.e., potential distribution) with no recorded presences (i.e., considered to be outside of the species dispersion range). Those geographic distribution were then stacked to estimate global species richness of every fish and each water column position.
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Ensemble simulations of the ecosystem model Apecosm (https://apecosm.org) forced by the IPSL-CM6-LR climate model with the climate change scenario SSP5-8.5. The output files contain yearly mean biomass density for 3 communities (epipelagic, mesopelagic migratory and mesopelagic redidents) and 100 size classes (ranging from 0.12cm to 1.96m) The model grid file is also provided. Units are in J/m2 and can be converted in kg/m2 by dividing by 4e6. These outputs are associated with the "Assessing the time of emergence of marine ecosystems from global to local scales using IPSL-CM6A-LR/APECOSM climate-to-fish ensemble simulations" paper from the Earth's Future "Past and Future of Marine Ecosystems" Special Collection.
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This dataset is an aggregation of all availale in situ data from Coriolis and Copernicus in situ data centres, observed in the French DCSMM area. It contains 5167 NetCDF CF files from 1903 to 2017. Each file contains the observations of a specific platform (e.g. vessel, mooring site, sea level station). Observed parameters are temperature, salinity, pressure, oxygen, nitrate, chlorophyll (and other bio-geo-chemicals), current, wave, sea level, river flow.
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This product contains observations and gridded files from two up-to-date carbon and biogeochemistry community data products: Surface Ocean Carbon ATlas SOCATv2023 and GLobal Ocean Data Analysis Project GLODAPv2.2023. The SOCATv2023-OBS dataset contains >25 million observations of fugacity of CO2 of the surface global ocean from 1957 to early 2023. The quality control procedures are described in Bakker et al. (2016). These observations form the basis of the gridded products included in SOCATv2023-GRIDDED: monthly, yearly and decadal averages of fCO2 over a 1x1 degree grid over the global ocean, and a 0.25x0.25 degree, monthly average for the coastal ocean. GLODAPv2.2023-OBS contains >1 million observations from individual seawater samples of temperature, salinity, oxygen, nutrients, dissolved inorganic carbon, total alkalinity and pH from 1972 to 2021. These data were subjected to an extensive quality control and bias correction described in Olsen et al. (2020). GLODAPv2-GRIDDED contains global climatologies for temperature, salinity, oxygen, nitrate, phosphate, silicate, dissolved inorganic carbon, total alkalinity and pH over a 1x1 degree horizontal grid and 33 standard depths using the observations from the previous major iteration of GLODAP, GLODAPv2. SOCAT and GLODAP are based on community, largely volunteer efforts, and the data providers will appreciate that those who use the data cite the corresponding articles (see References below) in order to support future sustainability of the data products.
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This dataset contains the dynamical outputs of a global ocean simulation coupling dynamics and biogeochemistry at ¼° over the year 2019. The simulation has been performed using the coupled circulation/ecosystem model NEMO/PISCES (https://www.nemo-ocean.eu/), which is here enhanced to perform an ensemble simulation with explicit simulation of modeling uncertainties in the physics and in the biogeochemistry. This dataset is one of the 40 members of the ensemble simulation. This study was part of the Horizon Europe project SEAMLESS (https://seamlessproject.org/Home.html), with the general objective of improving the analysis and forecast of ecosystem indicators. See Popov et al. (https://os.copernicus.org/articles/20/155/2024/) for more details on the study.
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Mesoscale eddy detection from 2000 to 2021 are computed using the AMEDA algorithm applied on AVISO L4 absolute dynamic topography at 1/8th degree. Eddy numbers correspond to tracks referenced in the DYNED atlas (https://doi.org/10.14768/2019130201.2). Detection is based on AVISO delyed-time product from 2000 to 2019 and on day+6 near-real-time altimetry from 2020 to 2021. Colocalisation is then made with available in situ profiles from Coriolis Ocean Dataset for Reanalysis (CORA) delayed-time data (113486 profiles) and Copernicus near-real-time profiles (43567).
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C-RAID: Comprehensive Reprocessing of Drifting Buoy Data (1979-2018) The C-RAID (Copernicus - Reprocessing of Drifting Buoys) project delivers a comprehensive global reprocessing of historical drifting buoy data and metadata, providing climate-quality observations for marine and atmospheric research. Dataset Overview The C-RAID dataset encompasses metadata from 21 858 drifting buoys deployed between 1979 and 2018. Of these, 17 496 buoys have undergone complete reprocessing with scientific validation in delayed mode, including comparison against ERA5 reanalysis. Project Context Managed by the WMO DBCP Drifting Buoys Global Data Assembly Centre (GDAC) through Ifremer, Météo-France, and Ocean Sciences Division of Fisheries and Oceans Canada, C-RAID focuses on enhanced quality control and delivery of climate-quality drifting buoy data for the Marine Climate Data System (MCDS). Objectives - Complete reprocessing and clean-up of the historical drifting buoy data archive - Recovery and rescue of missing datasets - Reprocessing of Argos data with improved positioning using Kalman filter algorithms - Homogenization of quality control procedures across marine and atmospheric parameters Funding & Governance C-RAID was funded by the Copernicus Programme through the European Environment Agency (Contract # EEA/IDM/15/026/LOT1), supporting cross-cutting coordination activities for the in-situ component of Copernicus Services. Stakeholders & Partnerships The project is led by the DB-GDAC consortium (Ifremer, Météo-France) in collaboration with EUMETNET's E-SURFMAR programme, NOAA AOML, and JCOMMOPS. Key Achievements - Reprocessing of approximately 24 000 buoy-years of observations - Recovery of missing datasets and metadata through data rescue efforts - Implementation of homogeneous, rich metadata and data formats - Enhanced Argos location accuracy using Kalman filter reprocessing - Standardized quality control and validation procedures Data Access & FAIR Principles C-RAID provides FAIR (Findable, Accessible, Interoperable, Reusable) data access through: - Web-based data discovery portal for human users - API services for data discovery, subsetting, and download (machine-to-machine access) Target Users The dataset serves major operational and research programmes including: - Copernicus Climate Change Service (C3S) - Copernicus Marine Environment Monitoring Service (CMEMS) - iQuam (in-situ SST Quality Monitor) - ICOADS (International Comprehensive Ocean-Atmosphere Data Set) - GHRSST (Group for High Resolution Sea Surface Temperature) - ISPD (International Surface Pressure Databank) - ICDC (Integrated Climate Data Center)
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This data set provides a monthly time series of the upper limb of the Meridional Overturning Circulation (MOC) intensity at the A25 Greenland-Portugal OVIDE line from 1993 to 2015. The MOC was derived by combining AVISO altimetry with ISAS temperature and salinity data. The reader is referred to Mercier et al. (2015, Progress in Oceanography) for a full description of the method.
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This dataset comprises two netcdf files. The first file contains the six global two-dimensional maps necessary to implement the tidal mixing parameterization presented in de Lavergne et al. (2020). Four power fields (E_wwi, E_sho, E_cri and E_hil) represent depth-integrated internal tide energy dissipation, with units of Watts per square meter. Each power field corresponds to a specific dissipative process and associated vertical structure of turbulence production. The two remaining fields, H_cri and H_bot, are decay heights (with units of meters) that enter the vertical structures of the E_cri and E_hil components, respectively. The second file contains three-dimensional fields of turbulence production (with units of Watts per kilogram) obtained by application of the parameterization to the WOCE global hydrographic climatology. The file includes the total turbulence production (epsilon_tid), its four components (epsilon_wwi, epsilon_sho, epsilon_cri, epsilon_hil), and the underlying hydrographic fields, as a function of longitude, latitude and depth. All maps have a horizontal resolution of 0.5º. Detailed documentation of the parameterization can be found in the following publication: de Lavergne, C., Vic, C., Madec, G., Roquet, F., Waterhouse, A.F., Whalen, C.B., Cuypers, Y., Bouruet-Aubertot, P., Ferron, B., Hibiya, T. A parameterization of local and remote tidal mixing. Journal of Advances in Modeling Earth Systems, 12, e2020MS002065 (2020). https://doi.org/10.1029/2020MS002065
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This dataset provides a World Ocean Atlas of Argo inferred statistics. The primary data are exclusively Argo profiles. The statistics are done using the whole time range covered by the Argo data, starting in July 1997. The atlas is provided with a 0.25° resolution in the horizontal and 63 depths from 0 m to 2,000 m in the vertical. The statistics include means of Conservative Temperature (CT), Absolute Salinity, compensated density, compressiblity factor and vertical isopycnal displacement (VID); standard deviations of CT, VID and the squared Brunt Vaisala frequency; skewness and kurtosis of VID; and Eddy Available Potential Energy (EAPE). The compensated density is the product of the in-situ density times the compressibility factor. It generalizes the virtual density used in Roullet et al. (2014). The compressibility factor is defined so as to remove the dependency with pressure of the in-situ density. The compensated density is used in the computation of the VID and the EAPE.
Catalogue PIGMA