This dataset contains the dynamical outputs of a global ocean simulation coupling dynamics and biogeochemistry at ¼° over the year 2019. The simulation has been performed using the coupled circulation/ecosystem model NEMO/PISCES (https://www.nemo-ocean.eu/), which is here enhanced to perform an ensemble simulation with explicit simulation of modeling uncertainties in the physics and in the biogeochemistry. This dataset is one of the 40 members of the ensemble simulation. This study was part of the Horizon Europe project SEAMLESS (https://seamlessproject.org/Home.html), with the general objective of improving the analysis and forecast of ecosystem indicators.   See Popov et al. (https://os.copernicus.org/articles/20/155/2024/) for more details on the study.

The Southern Ocean plays a fundamental role in regulating the global climate. This ocean also contains a rich and highly productive ecosystem, potentially vulnerable to climate change. Very large national and international efforts are directed towards the modeling of physical oceanographic processes to predict the response of the Southern Ocean to global climate change and the role played by the large-scale ocean climate processes. However, these modeling efforts are greatly limited by the lack of in situ measurements, especially at high latitudes and during winter months. The standard data that are needed to study ocean circulation are vertical profiles of temperature and salinity, from which we can deduce the density of seawater. These are collected with CTD (Conductivity-Temperature-Depth) sensors that are usually deployed on research vessels or, more recently, on autonomous Argo profilers. The use of conventional research vessels to collect these data is very expensive, and does not guarantee access to areas where sea ice is found at the surface of the ocean during the winter months. A recent alternative is the use of autonomous Argo floats. However, this technology is not easy to use in glaciated areas. In this context, the collection of hydrographic profiles from CTDs mounted on marine mammals is very advantageous. The choice of species, gender or age can be done to selectively obtain data in particularly under-sampled areas such as under the sea ice or on continental shelves. Among marine mammals, elephant seals are particularly interesting. Indeed, they have the particularity to continuously dive to great depths (590 ± 200 m, with maxima around 2000 m) for long durations (average length of a dive 25 ± 15 min, maximum 80 min). A Conductivity-Temperature-Depth Satellite Relay Data Logger (CTD-SRDLs) has been developed in the early 2000s to sample temperature and salinity vertical profiles during marine mammal dives (Boehme et al. 2009, Fedak 2013). The CTD-SRDL is attached to the seal on land, then it records hydrographic profiles during its foraging trips, sending the data by satellite ARGOS whenever the seal goes back to the surface.While the principle intent of seal instrumentation was to improve understanding of seal foraging strategies (Biuw et al., 2007), it has also provided as a by-product a viable and cost-effective method of sampling hydrographic properties in many regions of the Southern Ocean (Charrassin et al., 2008; Roquet et al., 2013).

Ensemble simulations of the ecosystem model Apecosm (https://apecosm.org) forced by the IPSL-CM6-LR climate model with the climate change scenario SSP5-8.5. The output files contain yearly mean biomass density for 3 communities (epipelagic, mesopelagic migratory and mesopelagic redidents) and 100 size classes (ranging from 0.12cm to 1.96m) The model grid file is also provided. Units are in J/m2 and can be converted in kg/m2 by dividing by 4e6. These outputs are associated with the "Assessing the time of emergence of marine ecosystems from global to local scales using IPSL-CM6A-LR/APECOSM climate-to-fish ensemble simulations" paper from the Earth's Future "Past and Future of Marine Ecosystems" Special Collection.

This dataset contains OAC-P results from application to Argo data in the World Ocean : - the 2000-2015 climatology of OAC-P results mapped onto a 0.5x0.5 grid with mapping error estimates; - the 2000-2015 probability density function of the permanent pycnocline potential density referenced to the sea surface vs Brunt-Väisälä frequency squared.OAC-P is an "Objective Algorithm for the Characterization of the permanent Pycnocline" developed to characterize subtropical gyre stratification features with both observed and modeled potential density profiles. OAC-P estimates the following properties: - for the permanent pycnocline: depth, upper and lower thicknesses, Brunt-Väisälä frequency squared, potential density, temperature and salinity; - for the surface mode water overlying the permanent pycnocline: depth, Brunt-Väisälä frequency squared, potential density, temperature and salinity. Argo data were download from Coriolis Argo GDAC on February, 8th 2016. Only Argo data with QC=1, 2, 5 or 8 were used.

This dataset contains (1) outputs of Species Distribution Models (SDMs) for marine fish and (2) estimation of species richness using those outputs. SDMs use correlative algorithms to link presences of species to the environment recorded in place and time of their observation, calculate their environmental niche, estimate the geographical location suitable for them (habitat suitability) and in fine their geographical distribution. Here, we downloaded presences of marine fish from two open source databases, GBIF and OBIS and 13 environmental predictors known to be relevant in fish ecology (list below). We used the CEPHALOPOD pipeline, a framework allowing the user the compute a lot of species at the same time, with comparable methods and a verification of quality of inputs and outputs at every steps (Schickele et al., 2025). 3,642 fish made it to the final step and have the habitat suitability estimated for 12 month + annual mean, 10 bootstrap to quantify uncertainty and x algorithms. Those estimation are available in the “L2_marine_fish_*.nc” files, organized by water column position (bathydemersal, bathypelagic, benthopelagic, demersal, pelagic-neritic, pelagic-oceanic, reef-associated). We then used their annual mean to estimate their actual geographic distribution by applying (1) a bathymetric filtration and (2) a cutting procedure which removes isolated patches of high suitability (i.e., potential distribution) with no recorded presences (i.e., considered to be outside of the species dispersion range). Those geographic distribution were then stacked to estimate global species richness of every fish and each water column position.

The upper ocean pycnocline (UOP) monthly climatology is based on the ISAS20 ARGO dataset containing Argo and Deep-Argo temperature and salinity profiles on the period 2002-2020. Regardless of the season, the UOP is defined as the shallowest significant stratification peak captured by the method described in Sérazin et al. (2022), whose detection threshold is proportional to the standard deviation of the stratification profile. The three main characteristics of the UOP are provided -- intensity, depth and thickness -- along with hydrographic variables at the upper and lower edges of the pycnocline, the Turner angle and density ratio at the depth of the UOP. A stratification index (SI) that evaluates the amount of buoyancy required to destratify the upper ocean down to a certain depth, is also included. When evaluated at the bottom of the UOP, this gives the upper ocean stratification index (UOSI) as discussed in Sérazin et al. (2022). Three mixed layer depth variables are also included in this dataset, including the one using the classic density threshold of 0.03 kg.m-3, along with the minimum of these MLD variables. Several statistics of the UOP characteristics and the associated quantities are available in 2°×2° bins for each month of the year, whose results were smoothed using a diffusive gaussian filter with a 500 km scale. UOP characteristics are also available for each profile, with all the profiles sorted in one file per month.

This product integrates observations aggregated and validated from the Regional EuroGOOS consortium (Arctic-ROOS, BOOS, NOOS, IBI-ROOS, MONGOOS and Black Sea GOOS) as well as from National Data Centers (NODCs) and JCOMM global systems (Argo, GOSUD, OceanSITES, GTSPP, DBCP) and the Global telecommunication system (GTS) used by the Met Offices. Data are available in a dedicated directory to waves (INSITU_GLO_WAV_REP_OBSERVATIONS_013_045) of GLOBAL Distribution Unit in one file per platform. This directory is updated twice a year. Data are distributed in two datasets, one with original time sampling and the other with hourly data and rounded timestamps. The information distributed includes wave parameters and wave spectral information. The latest version of Copernicus delayed-mode wave product is distributed from Copernicus Marine catalogue. Additional credits: The American wave data are collected from US NDBC (National Data Buoy Center). The Australian wave data are collected from Integrated Marine Observing System (IMOS); IMOS is enabled by the National Collaborative Research Infrastructure Strategy (NCRIS); It is operated by a consortium of institutions as an unincorporated joint venture, with the University of Tasmania as Lead Agent. The Canadian data are collected from Fisheries and Oceans Canada.

The Greenland-Portugal A25 OVIDE line is carried out biennially since 2002. The section is composed of 98 stations where hydrographic, biogeochemical and current measurements are carried out down to the bottom. OVIDE is a contribution to the international programs Go-Ship, IOCCP, and CLIVAR. This data set contains the final (adjusted) CTDO2 data. 

This data set contains the gridded hydrographic and transport data for the biennial Go-Ship A25 Greenland–Portugal OVIDE section from 2002 to 2012. The properties and transports are mapped on a 7km x 1m grid. Using a common grid facilitates the comparison between the different occupations of the line and the averaging. This data set was used in Daniault et al. (2016, Progress in Oceanography) to which the reader is referred for a description of the gridding method.

The Coriolis Ocean Dataset for Reanalysis for the Ireland-Biscay-Iberia region (hereafter CORA-IBI) product is a regional dataset of in situ temperature and salinity measurements. The latest version of the product covers the period 1950-2014. The CORA-IBI observations comes from many different sources collected by Coriolis data centre in collaboration with the In Situ Thematic Centre of the Copernicus Marine Service (CMEMS INSTAC).  The observations integrated in the CORA-IBI product have been acquired both by autonomous platforms (Argo profilers, fixed moorings, gliders, drifters, sea mammals, fishery observing system from the RECOPESCA program), research or opportunity vessels ( CTDs, XBTs, ferrybox).  This CORA-IBI product has been controlled using an objective analysis (statistical tests) method and a visual quality control (QC). This QC procedure has been developed with the main objective to improve the quality of the dataset to the level required by the climate application and the physical ocean re-analysis activities. It provides T and S individual profiles on their original level with QC flags. The reference level of measurements is immersion (in meters) or pressure (in decibars). It is a subset on the IBI (Iberia-Bay-of-Biscay Ireland) of the CMEMS product referenced hereafter. The main new features of this regional product compared with previous global CORA products are the incorporation of coastal profiles from fishery observing system (RECOPESCA programme) in the Bay of Biscay and the English Channel as well as the use of an historical dataset collected by the Service hydrographique de la Marine (SHOM).