This dataset contains (1) outputs of Species Distribution Models (SDMs) for marine fish and (2) estimation of species richness using those outputs. SDMs use correlative algorithms to link presences of species to the environment recorded in place and time of their observation, calculate their environmental niche, estimate the geographical location suitable for them (habitat suitability) and in fine their geographical distribution. Here, we downloaded presences of marine fish from two open source databases, GBIF and OBIS and 13 environmental predictors known to be relevant in fish ecology (list below). We used the CEPHALOPOD pipeline, a framework allowing the user the compute a lot of species at the same time, with comparable methods and a verification of quality of inputs and outputs at every steps (Schickele et al., 2025). 3,642 fish made it to the final step and have the habitat suitability estimated for 12 month + annual mean, 10 bootstrap to quantify uncertainty and x algorithms. Those estimation are available in the “L2_marine_fish_*.nc” files, organized by water column position (bathydemersal, bathypelagic, benthopelagic, demersal, pelagic-neritic, pelagic-oceanic, reef-associated). We then used their annual mean to estimate their actual geographic distribution by applying (1) a bathymetric filtration and (2) a cutting procedure which removes isolated patches of high suitability (i.e., potential distribution) with no recorded presences (i.e., considered to be outside of the species dispersion range). Those geographic distribution were then stacked to estimate global species richness of every fish and each water column position.

The continuously updated version of Copernicus Argo floats realtime currents product is distributed from Copernicus Marine catalogue: - https://resources.marine.copernicus.eu/?option=com_csw&view=details&product_id=INSITU_GLO_UV_NRT_OBSERVATIONS_013_048 The Argo current product generated by Copernicus in situ TAC is derived from the original trajectory data from Argo GDAC (Global Data Assembly Center) available at: - Argo float data and metadata from Global Data Assembly Centre (Argo GDAC). SEANOE. https://doi.org/10.17882/42182 In 2021, the GDAC distributes data from more than 15,000 Argo floats. Deep ocean current is calculated from floats drift at parking depth, surface current is calculated from float surface drift. An Argo float drifts freely in the global ocean, performing regular observation cycles. An observation cycle usually spreads over 10 days :  - a surface descent to a parking depth (generally 1500 meters deep) - a 10-day drift at this parking depth - an ascent to the surface (vertical profile) - A short surface drift for data transmission The data transmitted at each cycle contain temperature, salinity observations (and additional biogeochemical parameters if applicable), positions (gps or argos), technical data. The ocean current product contains a NetCDF file for each Argo float. It is updated daily in real time by automated processes. For each cycle it contains the surface and deep current variables: - Date (time, time_qc) - Position  (latitude, longitude, position_qc) - Pressure (pres, pres_qc, representative_park_pressure for parking drift, 0 decibar for surface drift) - Current (ewct, ewct_qc, nsct, nsct_qc; the current vector is positioned and dated at the last position of the N-1 cycle) - Duration (days) of the current variable sampling (time_interval) - Grounded indicator - Positions and dates have a QC 1 (good data). Positions and dates that do not have a QC 1 are ignored. The positions are measured during the surface drift (Argos or GPS positioning). For the deep current of cycle N, we take the last good position of cycle N-1 and the first good position of cycle N. For the surface current of cycle N, we take the first and last good position of the N cycle.  

The observations of campe glider on imedia deployment (Mediterranean Sea - Western basin) are distributed in 4 files: - EGO NetCDF time-series (data, metadata, derived sea water current) - NetCDF profiles extracted from the above time-series - Raw data - JSON metadata used by the decoder The following parameters are provided : - Practical salinity - Sea temperature in-situ ITS-90 scale - Electrical conductivity - Sea water pressure, equals 0 at sea-level

This data set contains the gridded hydrographic and transport data for the biennial Go-Ship A25 Greenland–Portugal OVIDE section from 2002 to 2012. The properties and transports are mapped on a 7km x 1m grid. Using a common grid facilitates the comparison between the different occupations of the line and the averaging. This data set was used in Daniault et al. (2016, Progress in Oceanography) to which the reader is referred for a description of the gridding method.

This dataset provides a World Ocean Atlas of Argo inferred statistics. The primary data are exclusively Argo profiles. The statistics are done using the whole time range covered by the Argo data, starting in July 1997. The atlas is provided with a 0.25° resolution in the horizontal and 63 depths from 0 m to 2,000 m in the vertical. The statistics include means of Conservative Temperature (CT), Absolute Salinity, compensated density, compressiblity factor and vertical isopycnal displacement (VID); standard deviations of CT, VID and the squared Brunt Vaisala frequency; skewness and kurtosis of VID; and Eddy Available Potential Energy (EAPE). The compensated density is the product of the in-situ density times the compressibility factor. It generalizes the virtual density used in Roullet et al. (2014). The compressibility factor is defined so as to remove the dependency with pressure of the in-situ density. The compensated density is used in the computation of the VID and the EAPE.

This dataset contains the dynamical outputs of a global ocean simulation coupling dynamics and biogeochemistry at ¼° over the year 2019. The simulation has been performed using the coupled circulation/ecosystem model NEMO/PISCES (https://www.nemo-ocean.eu/), which is here enhanced to perform an ensemble simulation with explicit simulation of modeling uncertainties in the physics and in the biogeochemistry. This dataset is one of the 40 members of the ensemble simulation. This study was part of the Horizon Europe project SEAMLESS (https://seamlessproject.org/Home.html), with the general objective of improving the analysis and forecast of ecosystem indicators.   See Popov et al. (https://os.copernicus.org/articles/20/155/2024/) for more details on the study.

The COriolis Ocean Dataset for Reanalysis (hereafter "CORA") product is a global dataset of in situ temperature and salinity measurements. The CORA observations comes from many different sources collected by Coriolis data centre in collaboration with the In Situ Thematic Centre of the Copernicus Marine Service (CMEMS INSTAC).  The observation integrated in the CORA product have been acquired both by autonomous platforms (Argo profilers, fixed moorings , gliders , drifters, sea mammals) , research or opportunity vessels (CTDs, XBTs, ferrybox).  From the near real time CMEMS In Situ Thematic Centre product validated on a daily and weekly basis for forecasting purposes, a scientifically validated product is created. It s a "reference product" updated on a yearly basis since 2007. This product has been controlled using an objective analysis (statistical tests) method and a visual quality control (QC). This QC procedure has been developed with the main objective to improve the quality of the dataset to the level required by the climate application and the physical ocean re-analysis activities. It provides T and S weekly gridded fields and individual profiles both on their original level with QC flags and interpolated level. The measured parameters, depending on the data source, are : temperature, salinity. The reference level of measurements is immersion (in meters) or pressure (in decibars).  CORA contains historical profiles extracted from the EN.4 global T&S dataset, World Ocean Atlas, SeaDataNet, ICES and other data aggregators . The last version of the CORA product are also available freely from the Copernicus WEB site :   - Global Ocean- CORA- In-situ Observations Yearly Delivery in Delayed Mode - Global Ocean- Delayed Mode gridded CORA- In-situ Observations objective analysis in Delayed Mode  

This dataset is composed by the climatological seasonal field of the Ocean Salinity Stratification as defined from the Brunt-Vaisala frequency limited to the upper 300 m depth. The details are given in Maes, C., and T. J. O’Kane (2014), Seasonal variations of the upper ocean salinity stratification in the Tropics, J. Geophys. Res. Oceans, 119, 1706–1722, doi:10.1002/2013JC009366.

Observations of Sea surface temperature and salinity are now obtained from voluntary sailing ships using medium or small size sensors. They complement the networks installed on research vessels or commercial ships. The delayed mode dataset proposed here is upgraded annually as a contribution to GOSUD (http://www.gosud.org )

A quantitative understanding of the integrated ocean heat content depends on our ability to determine how heat is distributed in the ocean and what are the associated coherent patterns. This dataset contains the results of the Maze et al., 2017 (Prog. Oce.) study demonstrating how this can be achieved using unsupervised classification of Argo temperature profiles. The dataset contains: - A netcdf file with classification~results (labels and probabilities) and coordinates (lat/lon/time) of 100,684 Argo temperature profiles in North Atlantic. - A netcdf file with a Profile Classification Model (PCM) that can be used to classify new temperature profiles from observations or numerical models. The classification method used is a Gaussian Mixture Model that decomposes the Probability Density Function of the dataset into a weighted sum of Gaussian modes. North Atlantic Argo temperature profiles between 0 and 1400m depth were interpolated onto a regular 5m grid, then compressed using Principal Component Analysis and finally classified using a Gaussian Mixture Model. To use the netcdf PCM file to classify new data, you can checkout our PCM Matlab and Python toolbox here: https://github.com/obidam/pcm