This dataset contains (1) outputs of Species Distribution Models (SDMs) for marine fish and (2) estimation of species richness using those outputs. SDMs use correlative algorithms to link presences of species to the environment recorded in place and time of their observation, calculate their environmental niche, estimate the geographical location suitable for them (habitat suitability) and in fine their geographical distribution. Here, we downloaded presences of marine fish from two open source databases, GBIF and OBIS and 13 environmental predictors known to be relevant in fish ecology (list below). We used the CEPHALOPOD pipeline, a framework allowing the user the compute a lot of species at the same time, with comparable methods and a verification of quality of inputs and outputs at every steps (Schickele et al., 2025). 3,642 fish made it to the final step and have the habitat suitability estimated for 12 month + annual mean, 10 bootstrap to quantify uncertainty and x algorithms. Those estimation are available in the “L2_marine_fish_*.nc” files, organized by water column position (bathydemersal, bathypelagic, benthopelagic, demersal, pelagic-neritic, pelagic-oceanic, reef-associated). We then used their annual mean to estimate their actual geographic distribution by applying (1) a bathymetric filtration and (2) a cutting procedure which removes isolated patches of high suitability (i.e., potential distribution) with no recorded presences (i.e., considered to be outside of the species dispersion range). Those geographic distribution were then stacked to estimate global species richness of every fish and each water column position.

This data set provides a monthly time series of the upper limb of the Meridional Overturning Circulation (MOC) intensity at the A25 Greenland-Portugal OVIDE line from 1993 to 2015. The MOC was derived by combining AVISO altimetry with ISAS temperature and salinity data. The reader is referred to Mercier et al. (2015, Progress in Oceanography) for a full description of the method.

This dataset contains the dynamical outputs of a global ocean simulation coupling dynamics and biogeochemistry at ¼° over the year 2019. The simulation has been performed using the coupled circulation/ecosystem model NEMO/PISCES (https://www.nemo-ocean.eu/), which is here enhanced to perform an ensemble simulation with explicit simulation of modeling uncertainties in the physics and in the biogeochemistry. This dataset is one of the 40 members of the ensemble simulation. This study was part of the Horizon Europe project SEAMLESS (https://seamlessproject.org/Home.html), with the general objective of improving the analysis and forecast of ecosystem indicators.   See Popov et al. (https://os.copernicus.org/articles/20/155/2024/) for more details on the study.

Ensemble simulations of the ecosystem model Apecosm (https://apecosm.org) forced by the IPSL-CM6-LR climate model with the climate change scenario SSP5-8.5. The output files contain yearly mean biomass density for 3 communities (epipelagic, mesopelagic migratory and mesopelagic redidents) and 100 size classes (ranging from 0.12cm to 1.96m) The model grid file is also provided. Units are in J/m2 and can be converted in kg/m2 by dividing by 4e6. These outputs are associated with the "Assessing the time of emergence of marine ecosystems from global to local scales using IPSL-CM6A-LR/APECOSM climate-to-fish ensemble simulations" paper from the Earth's Future "Past and Future of Marine Ecosystems" Special Collection.

This data set contains the gridded hydrographic and transport data for the biennial Go-Ship A25 Greenland–Portugal OVIDE section from 2002 to 2012. The properties and transports are mapped on a 7km x 1m grid. Using a common grid facilitates the comparison between the different occupations of the line and the averaging. This data set was used in Daniault et al. (2016, Progress in Oceanography) to which the reader is referred for a description of the gridding method.

This delayed mode product designed for reanalysis purposes integrates the best available version of in situ data for ocean surface currents and current vertical profiles. It concerns three delayed time datasets dedicated to near-surface currents measurements coming from three platforms (Lagrangian surface drifters, High Frequency radars and Argo floats) and velocity profiles within the water column coming from the Acoustic Doppler Current Profiler (ADCP, vessel mounted only). The latest version of Copernicus surface and sub-surface water velocity product is also distributed from Copernicus Marine catalogue.

This dataset is composed by the climatological seasonal field of the Ocean Salinity Stratification as defined from the Brunt-Vaisala frequency limited to the upper 300 m depth. The details are given in Maes, C., and T. J. O’Kane (2014), Seasonal variations of the upper ocean salinity stratification in the Tropics, J. Geophys. Res. Oceans, 119, 1706–1722, doi:10.1002/2013JC009366.

This product integrates sea level observations aggregated and validated from the Regional EuroGOOS consortium (Arctic-ROOS, BOOS, NOOS, IBI-ROOS, MONGOOS) and Black Sea GOOS as well as from the Global telecommunication system (GTS) used by the Met Offices. The latest version of Copernicus delayed-mode Sea level product is also distributed from Copernicus Marine catalogue.

These monthly gridded climatology were produced using MBT, XBT, Profiling floats, Gliders, and ship-based CTD data from different database and carried out in the Med. between 1969 and 2013. The Mixed Layer Depth (MLD) is calculated with a delta T= 0.1 C criterion relative to 10m reference level on individual profiles. The Depth of the Bottom of the Seasonal Thermocline (DBST) is calculated on individual profiles as the maximum value from a vector composed of two elements: 1) the depth of the temperature minimum in the upper 200m; 2) the MLD. This double criterion for the calculation of DBST is necessary in areas where the mixed layer exceed 200m depth. DBST is the integration depth used in the calculation of the upper-ocean Heat Storage Rate. For more details about the data and the methods used, see: Houpert et al. 2015, Seasonal cycle of the mixed layer, the seasonal thermocline and the upper-ocean heat storage rate in the Mediterranean Sea derived from observations, Progress in Oceanography, http://doi.org/10.1016/j.pocean.2014.11.004

The DBCP – Data Buoy Cooperation Panel - is an international program coordinating the use of autonomous data buoys to observe atmospheric and oceanographic conditions, over ocean areas where few other measurements are taken. DBCP coordinates the global array of 1 600 active drifting buoys (August 2020) and historical observation from 14 000 drifting buoys. Data and metadata collected by drifting buoys are publically available in near real-time via the Global Data Assembly Centers (GDACs) in Coriolis-Ifremer (France) and MEDS (Canada) after an automated quality control (QC). In long term, scientifically quality controlled delayed mode data will be distributed on the GDACs. Disclaimer: the DB-GDAC is under construction. It is currently (January 2020) aggregating data from the Coriolis DAC (E-Surfmar, Canada). Additional DACs are considered. An interim provision from GTS real-time data to GDAC may be provided from Coriolis DAC.