'''DEFINITION''' The Mediterranean water mass formation rates are evaluated in 4 areas as defined in the Ocean State Report issue 2 (OSR2, von Schuckmann et al., 2018) section 3.4 (Simoncelli and Pinardi, 2018): (1) the Gulf of Lions for the Western Mediterranean Deep Waters (WMDW); (2) the Southern Adriatic Sea Pit for the Eastern Mediterranean Deep Waters (EMDW); (3) the Cretan Sea for Cretan Intermediate Waters (CIW) and Cretan Deep Waters (CDW); (4) the Rhodes Gyre, the area of formation of the so-called Levantine Intermediate Waters (LIW) and Levantine Deep Waters (LDW). Annual water mass formation rates have been computed using daily mixed layer depth estimates (density criteria Δσ = 0.01 kg/m3, 10 m reference level) considering the annual maximum volume of water above mixed layer depth with potential density within or higher the specific thresholds specified in Table 1 then divided by seconds per year. Annual mean values are provided using the Mediterranean 1/24o eddy resolving reanalysis (Escudier et al. 2020, 2021). Time spans from 1987 to the year preceding the current one [-1Y], operationally extended yearly. '''CONTEXT''' The formation of intermediate and deep water masses is one of the most important processes occurring in the Mediterranean Sea, being a component of its general overturning circulation. This circulation varies at interannual and multidecadal time scales and it is composed of an upper zonal cell (Zonal Overturning Circulation) and two main meridional cells in the western and eastern Mediterranean (Pinardi and Masetti 2000). The objective is to monitor the main water mass formation events using the eddy resolving Mediterranean Sea Reanalysis (MEDSEA_MULTIYEAR_PHY_006_004, Escudier et al. 2020, 2021) and considering Pinardi et al. (2015) and Simoncelli and Pinardi (2018) as references for the methodology. The Mediterranean Sea Reanalysis can reproduce both Eastern Mediterranean Transient and Western Mediterranean Transition phenomena and catches the principal water mass formation events reported in the literature. This will permit constant monitoring of the open ocean deep convection process in the Mediterranean Sea and a better understanding of the multiple drivers of the general overturning circulation at interannual and multidecadal time scales. Deep and intermediate water formation events reveal themselves by a deep mixed layer depth distribution in four Mediterranean areas: Gulf of Lions, Southern Adriatic Sea Pit, Cretan Sea and Rhodes Gyre. '''KEY FINDINGS''' The Western Mediterranean Deep Water (WMDW) formation events in the Gulf of Lion appear to be larger after 1999 consistently with Schroeder et al. (2006, 2008) related to the Eastern Mediterranean Transient event. This modification of WMDW after 2005 has been called Western Mediterranean Transition. WMDW formation events are consistent with Somot et al. (2016) and the event in 2009 is also reported in Houpert et al. (2016). The Eastern Mediterranean Deep Water (EMDW) formation in the Southern Adriatic Pit region displays a period of water mass formation between 1988 and 1993, in agreement with Pinardi et al. (2015), in 1996, 1999 and 2000 as documented by Manca et al. (2002). Weak deep water formation in winter 2006 is confirmed by observations in Vilibić and Šantić (2008). An intense deep water formation event is detected in 2012-2013 (Gačić et al., 2014). Last years are characterized by large events starting from 2017 (Mihanovic et al., 2021). Cretan Intermediate Water formation rates present larger peaks between 1989 and 1993 with the ones in 1992 and 1993 composing the Eastern Mediterranean Transient phenomena. The Cretan Deep Water formed in 1992 and 1993 is characterized by the highest densities of the entire period in accordance with Velaoras et al. (2014). The Levantine Deep Water formation rate in the Rhode Gyre region presents the largest values between 1992 and 1993 in agreement with Kontoyiannis et al. (1999). '''DOI (product):''' https://doi.org/10.48670/mds-00318

The GEBCO_2020 Grid was released in May 2020 and is the second global bathymetric product released by the General Bathymetric Chart of the Oceans (GEBCO) and has been developed through the Nippon Foundation-GEBCO Seabed 2030 Project. The GEBCO_2020 Grid provides global coverage of elevation data in meters on a 15 arc-second grid of 43200 rows x 86400 columns, giving 3,732,480,000 data points. Grid Development The GEBCO_2020 Grid is a continuous, global terrain model for ocean and land with a spatial resolution of 15 arc seconds. The grid uses as a ‘base’ Version 2 of the SRTM15+ data set (Tozer et al, 2019). This data set is a fusion of land topography with measured and estimated seafloor topography. It is augmented with the gridded bathymetric data sets developed by the four Seabed 2030 Regional Centers. The Regional Centers have compiled gridded bathymetric data sets, largely based on multibeam data, for their areas of responsibility. These regional grids were then provided to the Global Center. For areas outside of the polar regions (primarily south of 60°N and north of 50°S), these data sets are in the form of 'sparse grids', i.e. only grid cells that contain data were populated. For the polar regions, complete grids were provided due to the complexities of incorporating data held in polar coordinates. The compilation of the GEBCO_2020 Grid from these regional data grids was carried out at the Global Center, with the aim of producing a seamless global terrain model. In contrast to the development of the previous GEBCO grid, GEBCO_2019, the data sets provided as sparse grids by the Regional Centers were included on to the base grid without any blending, i.e. grid cells in the base grid were replaced with data from the sparse grids. This was with aim of avoiding creating edge effects, 'ridges and ripples', at the boundaries between the sparse grids and base grid during the blending process used previously. In addition, this allows a clear identification of the data source within the grid, with no cells being 'blended' values. Routines from Generic Mapping Tools (GMT) system were used to do the merging of the data sets. For the polar data sets, and the adjoining North Sea area, supplied in the form of complete grids these data sets were included using feather blending techniques from GlobalMapper software version 11.0, made available by Blue Marble Geographic. The GEBCO_2020 Grid includes data sets from a number of international and national data repositories and regional mapping initiatives. For information on the data sets included in the GEBCO_2020 Grid, please see the list of contributions included in this release of the grid (https://www.gebco.net/data_and_products/gridded_bathymetry_data/gebco_2020/#compilations).

Metagenomic analysis of clams from Sanaga river in Cameroon to describe the virome

Maisons de la communauté

Le partenariat entre l’ensapBx et le GIP ATGeRi a permis la réalisation d’un atlas numérique via le catalogue et le visualiseur PIGMA. Cet atlas numérique donne accès à : - une carte sur laquelle sont situés des travaux d’étudiants et enseignants de l’ensapBx, - un lien vers le portail ArchiRès dans lequel sont décrits ces travaux de l’ensapBx avec téléchargement du document (lorsqu’il a été numérisé). De nombreux documents ont été référencés par l'ensapBx dans le catalogue PIGMA. Ils portent essentiellement sur les TPFE (travail personnel de fin d'études) et les PFE (projet de fin d'études). Ce référencement est alimenté progressivement par de nouveaux travaux.

'''DEFINITION''' The Strong Wave Incidence index is proposed to quantify the variability of strong wave conditions in the Iberia-Biscay-Ireland regional seas. The anomaly of exceeding a threshold of Significant Wave Height is used to characterize the wave behavior. A sensitivity test of the threshold has been performed evaluating the differences using several ones (percentiles 75, 80, 85, 90, and 95). From this indicator, it has been chosen the 90th percentile as the most representative, coinciding with the state-of-the-art. Two Copernicus Marine products are used to compute the Strong Wave Incidence index: * IBI-WAV-MYP: '''IBI_MULTIYEAR_WAV_005_006''' * IBI-WAV-NRT: '''IBI_ANALYSISFORECAST_WAV_005_005''' The Strong Wave Incidence index (SWI) is defined as the difference between the climatic frequency of exceedance (Fclim) and the observational frequency of exceedance (Fobs) of the threshold defined by the 90th percentile (ThP90) of Significant Wave Height (SWH) computed on a monthly basis from hourly data of IBI-WAV-MYP product: SWI = Fobs(SWH > ThP90) – Fclim(SWH > ThP90) Since the Strong Wave Incidence index is defined as a difference of a climatic mean and an observed value, it can be considered an anomaly. Such index represents the percentage that the stormy conditions have occurred above/below the climatic average. Thus, positive/negative values indicate the percentage of hourly data that exceed the threshold above/below the climatic average, respectively. '''CONTEXT''' Ocean waves have a high relevance over the coastal ecosystems and human activities. Extreme wave events can entail severe impacts over human infrastructures and coastal dynamics. However, the incidence of severe (90th percentile) wave events also have valuable relevance affecting the development of human activities and coastal environments. The Strong Wave Incidence index based on the Copernicus Marine regional analysis and reanalysis product provides information on the frequency of severe wave events. The IBI-MFC covers the Europe’s Atlantic coast in a region bounded by the 26ºN and 56ºN parallels, and the 19ºW and 5ºE meridians. The western European coast is located at the end of the long fetch of the subpolar North Atlantic (Mørk et al., 2010), one of the world’s greatest wave generating regions (Folley, 2017). Several studies have analyzed changes of the ocean wave variability in the North Atlantic Ocean (Bacon and Carter, 1991; Kushnir et al., 1997; WASA Group, 1998; Bauer, 2001; Wang and Swail, 2004; Dupuis et al., 2006; Wolf and Woolf, 2006; Dodet et al., 2010; Young et al., 2011; Young and Ribal, 2019). The observed variability is composed of fluctuations ranging from the weather scale to the seasonal scale, together with long-term fluctuations on interannual to decadal scales associated with large-scale climate oscillations. Since the ocean surface state is mainly driven by wind stresses, part of this variability in Iberia-Biscay-Ireland region is connected to the North Atlantic Oscillation (NAO) index (Bacon and Carter, 1991; Hurrell, 1995; Bouws et al., 1996, Bauer, 2001; Woolf et al., 2002; Tsimplis et al., 2005; Gleeson et al., 2017). However, later studies have quantified the relationships between the wave climate and other atmospheric climate modes such as the East Atlantic pattern, the Arctic Oscillation pattern, the East Atlantic Western Russian pattern and the Scandinavian pattern (Izaguirre et al., 2011, Martínez-Asensio et al., 2016). The Strong Wave Incidence index provides information on incidence of stormy events in four monitoring regions in the IBI domain. The selected monitoring regions (Figure 1.A) are aimed to provide a summarized view of the diverse climatic conditions in the IBI regional domain: Wav1 region monitors the influence of stormy conditions in the West coast of Iberian Peninsula, Wav2 region is devoted to monitor the variability of stormy conditions in the Bay of Biscay, Wav3 region is focused in the northern half of IBI domain, this region is strongly affected by the storms transported by the subpolar front, and Wav4 is focused in the influence of marine storms in the North-East African Coast, the Gulf of Cadiz and Canary Islands. More details and a full scientific evaluation can be found in the CMEMS Ocean State report (Pascual et al., 2020). '''CMEMS KEY FINDINGS''' The trend analysis of the SWI index for the period 1980–2024 shows statistically significant trends (at the 99% confidence level) in wave incidence, with an increase of at least 0.05 percentage points per year in regions WAV1, WAV3, and WAV4. The analysis of the historical period, based on reanalysis data, highlights the major wave events recorded in each monitoring region. In region WAV1 (panel B), the maximum wave event occurred in February 2014, resulting in a 28% increase in strong wave conditions. In region WAV2 (panel C), two notable wave events were identified in November 2009 and February 2014, with increases of 16–18% in strong wave conditions. Similarly, in region WAV3 (panel D), a major event occurred in February 2014, marking one of the most intense events in the region with a 20% increase in storm wave conditions. Additionally, a comparable storm affected the region two months earlier, in December 2013. In region WAV4 (panel E), the most extreme event took place in January 1996, producing a 25% increase in strong wave conditions. Although each monitoring region is generally affected by independent wave events, the analysis reveals several historical events with above-average wave activity that propagated across multiple regions: November–December 2010 (WAV3 and WAV2), February 2014 (WAV1, WAV2, and WAV3), and February–March 2018 (WAV1 and WAV4). The analysis of the near-real-time (NRT) period (from January 2024 onward) identifies a significant event in February 2024 that impacted regions WAV1 and WAV4, resulting in increases of 20% and 15% in strong wave conditions, respectively. For region WAV4, this event represents the second most intense event recorded in the region. '''DOI (product):''' https://doi.org/10.48670/moi-00251

NAUTILOS, a Horizon 2020 Innovation Action project funded under EU’s the Future of Seas and Oceans Flagship Initiative, aims to fill in marine observation and modelling gaps for biogeochemical, biological and deep ocean physics essential ocean variables and micro-/nano-plastics, by developing a new generation of cost-effective sensors and samplers, their integration within observing platforms and deployment in large-scale demonstrations in European seas. The principles underlying NAUTILOS are those of the development, integration, validation and demonstration of new cutting-edge technologies with regards to sensors, interoperability and embedding skills. The development is always guided by the objectives of scalability, modularity, cost-effectiveness, and open-source availability of software products produced. Bringing together 21 entities from 11 European countries with multidisciplinary expertise, NAUTILOS has the fundamental aim to complement and expand current European observation tools and services, to obtain a collection of data at a much higher spatial resolution, temporal regularity and length than currently available at the European scale, and to further enable and democratize the monitoring of the marine environment to both traditional and non-traditional data users.

'''DEFINITION''' The CMEMS MEDSEA_OMI_tempsal_extreme_var_temp_mean_and_anomaly OMI indicator is based on the computation of the annual 99th percentile of Sea Surface Temperature (SST) from model data. Two different CMEMS products are used to compute the indicator: The Iberia-Biscay-Ireland Multi Year Product (MEDSEA_MULTIYEAR_PHY_006_004) and the Analysis product (MEDSEA_ANALYSISFORECAST_PHY_006_013). Two parameters have been considered for this OMI: * Map of the 99th mean percentile: It is obtained from the Multi Year Product, the annual 99th percentile is computed for each year of the product. The percentiles are temporally averaged over the whole period (1987-2019). * Anomaly of the 99th percentile in 2020: The 99th percentile of the year 2020 is computed from the Near Real Time product. The anomaly is obtained by subtracting the mean percentile from the 2020 percentile. This indicator is aimed at monitoring the extremes of sea surface temperature every year and at checking their variations in space. The use of percentiles instead of annual maxima, makes this extremes study less affected by individual data. This study of extreme variability was first applied to the sea level variable (Pérez Gómez et al 2016) and then extended to other essential variables, such as sea surface temperature and significant wave height (Pérez Gómez et al 2018 and Alvarez Fanjul et al., 2019). More details and a full scientific evaluation can be found in the CMEMS Ocean State report (Alvarez Fanjul et al., 2019). '''CONTEXT''' The Sea Surface Temperature is one of the Essential Ocean Variables, hence the monitoring of this variable is of key importance, since its variations can affect the ocean circulation, marine ecosystems, and ocean-atmosphere exchange processes. As the oceans continuously interact with the atmosphere, trends of sea surface temperature can also have an effect on the global climate. In recent decades (from mid ‘80s) the Mediterranean Sea showed a trend of increasing temperatures (Ducrocq et al., 2016), which has been observed also by means of the CMEMS SST_MED_SST_L4_REP_OBSERVATIONS_010_021 satellite product and reported in the following CMEMS OMI: MEDSEA_OMI_TEMPSAL_sst_area_averaged_anomalies and MEDSEA_OMI_TEMPSAL_sst_trend. The Mediterranean Sea is a semi-enclosed sea characterized by an annual average surface temperature which varies horizontally from ~14°C in the Northwestern part of the basin to ~23°C in the Southeastern areas. Large-scale temperature variations in the upper layers are mainly related to the heat exchange with the atmosphere and surrounding oceanic regions. The Mediterranean Sea annual 99th percentile presents a significant interannual and multidecadal variability with a significant increase starting from the 80’s as shown in Marbà et al. (2015) which is also in good agreement with the multidecadal change of the mean SST reported in Mariotti et al. (2012). Moreover the spatial variability of the SST 99th percentile shows large differences at regional scale (Darmariaki et al., 2019; Pastor et al. 2018). '''CMEMS KEY FINDINGS''' The Mediterranean mean Sea Surface Temperature 99th percentile evaluated in the period 1987-2019 (upper panel) presents highest values (~ 28-30 °C) in the eastern Mediterranean-Levantine basin and along the Tunisian coasts especially in the area of the Gulf of Gabes, while the lowest (~ 23–25 °C) are found in the Gulf of Lyon (a deep water formation area), in the Alboran Sea (affected by incoming Atlantic waters) and the eastern part of the Aegean Sea (an upwelling region). These results are in agreement with previous findings in Darmariaki et al. (2019) and Pastor et al. (2018) and are consistent with the ones presented in CMEMS OSR3 (Alvarez Fanjul et al., 2019) for the period 1993-2016. The 2020 Sea Surface Temperature 99th percentile anomaly map (bottom panel) shows a general positive pattern up to +3°C in the North-West Mediterranean area while colder anomalies are visible in the Gulf of Lion and North Aegean Sea . This Ocean Monitoring Indicator confirms the continuous warming of the SST and in particular it shows that the year 2020 is characterized by an overall increase of the extreme Sea Surface Temperature values in almost the whole domain with respect to the reference period. This finding can be probably affected by the different dataset used to evaluate this anomaly map: the 2020 Sea Surface Temperature 99th percentile derived from the Near Real Time Analysis product compared to the mean (1987-2019) Sea Surface Temperature 99th percentile evaluated from the Reanalysis product which, among the others, is characterized by different atmospheric forcing). Note: The key findings will be updated annually in November, in line with OMI evolutions. '''DOI (product):''' https://doi.org/10.48670/moi-00266

Pôles de la CAPB correspondant aux anciens EPCI

The Marine Reporting Units (MRUs) are used within the reporting obligations of the Marine Strategy Framework Directive (MSFD) in order to link the implementation of the different articles to specific marine areas. The MRUs can be of varying sizes, according to the appropriate scale for the different reports (e.g. region, sub-region, regional or sub-regional subdivision, Member State marine waters, WFD coastal waters, etc.), as indicated in the Good Environmental Status 2017 Decision. The present data set is the second public version released of the MRUs used during the MSFD 2018 reporting exercise on the update of Articles 8, 9 and 10. Only the MRUs of those countries that have gone through the reporting exercise by June 2020 have been included in this data set. Apart from the countries included already in version 1 of the dataset (SE, FI, EE, LV, PL, DE, DK, NL, BE, FR, ES, HR and RO), this version also includes seven more countries, namely MT, LT, IT, SI, CY, PT and IE. The data set is distributed in SHP and in INSPIRE-compliant GML format, made available also through an INSPIRE compliant ATOM service.