Metagenomic analysis of clams from Sanaga river in Cameroon to describe the virome

Level 3, four times a day, sub-skin Sea Surface Temperature derived from AVHRR on Metop satellites and VIIRS or AVHRR on NOAA and NPP satellites, over North Atlantic and European Seas and re-projected on a polar stereographic at 2 km resolution, in GHRSST compliant netCDF format. This catalogue entry presents NOAA-20 North Atlantic Regional Sea Surface Temperature. SST is retrieved from infrared channels using a multispectral algorithm and a cloud mask. Atmospheric profiles of water vapor and temperature from a numerical weather prediction model, Sea Surface Temperature from an analysis, together with a radiative transfer model, are used to correct the multispectral algorithm for regional and seasonal biases due to changing atmospheric conditions. The quality of the products is monitored regularly by daily comparison of the satellite estimates against buoy measurements. The product format is compliant with the GHRSST Data Specification (GDS) version 2.Users are advised to use data only with quality levels 3,4 and 5.

The SDC_GLO_CLIM_O2_AOU product contains two different monthly climatology for dissolved Oxygen and Apparent Oxygen Utilization, SDC_GLO_CLIM_O2 and SDC_GLO_CLIM_AOU respectively from the World Ocean Data (WOD) database. Only basic quality control flags from the WOD are used. The first climatology, SDC_GLO_CLIM_O2, considers Dissolved Oxygen profiles casted together with temperature and salinity from CTD, Profiling Floats (PFL) and Ocean Station Data (OSD) for time duration 2003 to 2017. The second climatology, SDC_GLO_CLIM_AOU, apparent Oxygen utilization, is computed as a difference of dissolved oxygen and saturation O2 profiles. The gridded fields are computed using DIVAnd (Data Interpolating Variational Analysis) version 2.3.1.

'''This product has been archived''' '''DEFINITION''' The CMEMS IBI_OMI_tempsal_extreme_var_temp_mean_and_anomaly OMI indicator is based on the computation of the annual 99th percentile of Sea Surface Temperature (SST) from model data. Two different CMEMS products are used to compute the indicator: The Iberia-Biscay-Ireland Multi Year Product (IBI_MULTIYEAR_PHY_005_002) and the Analysis product (IBI_ANALYSISFORECAST_PHY_005_001). Two parameters have been considered for this OMI: • Map of the 99th mean percentile: It is obtained from the Multi Year Product, the annual 99th percentile is computed for each year of the product. The percentiles are temporally averaged over the whole period (1993-2021). • Anomaly of the 99th percentile in 2022: The 99th percentile of the year 2022 is computed from the Analysis product. The anomaly is obtained by subtracting the mean percentile from the 2022 percentile. This indicator is aimed at monitoring the extremes of sea surface temperature every year and at checking their variations in space. The use of percentiles instead of annual maxima, makes this extremes study less affected by individual data. This study of extreme variability was first applied to the sea level variable (Pérez Gómez et al 2016) and then extended to other essential variables, such as sea surface temperature and significant wave height (Pérez Gómez et al 2018 and Alvarez Fanjul et al., 2019). More details and a full scientific evaluation can be found in the CMEMS Ocean State report (Alvarez Fanjul et al., 2019). '''CONTEXT''' The Sea Surface Temperature is one of the essential ocean variables, hence the monitoring of this variable is of key importance, since its variations can affect the ocean circulation, marine ecosystems, and ocean-atmosphere exchange processes. As the oceans continuously interact with the atmosphere, trends of sea surface temperature can also have an effect on the global climate. While the global-averaged sea surface temperatures have increased since the beginning of the 20th century (Hartmann et al., 2013) in the North Atlantic, anomalous cold conditions have also been reported since 2014 (Mulet et al., 2018; Dubois et al., 2018). The IBI area is a complex dynamic region with a remarkable variety of ocean physical processes and scales involved. The Sea Surface Temperature field in the region is strongly dependent on latitude, with higher values towards the South (Locarnini et al. 2013). This latitudinal gradient is supported by the presence of the eastern part of the North Atlantic subtropical gyre that transports cool water from the northern latitudes towards the equator. Additionally, the Iberia-Biscay-Ireland region is under the influence of the Sea Level Pressure dipole established between the Icelandic low and the Bermuda high. Therefore, the interannual and interdecadal variability of the surface temperature field may be influenced by the North Atlantic Oscillation pattern (Czaja and Frankignoul, 2002; Flatau et al., 2003). Also relevant in the region are the upwelling processes taking place in the coastal margins. The most referenced one is the eastern boundary coastal upwelling system off the African and western Iberian coast (Sotillo et al., 2016), although other smaller upwelling systems have also been described in the northern coast of the Iberian Peninsula (Alvarez et al., 2011), the south-western Irish coast (Edwars et al., 1996) and the European Continental Slope (Dickson, 1980). '''CMEMS KEY FINDINGS''' In the IBI region, the 99th mean percentile for 1993-2021 shows a north-south pattern driven by the climatological distribution of temperatures in the North Atlantic. In the coastal regions of Africa and the Iberian Peninsula, the mean values are influenced by the upwelling processes (Sotillo et al., 2016). These results are consistent with the ones presented in Álvarez Fanjul (2019) for the period 1993-2016. The analysis of the 99th percentile anomaly in the year 2023 shows that this period has been affected by a severe impact of maximum SST values. Anomalies exceeding the standard deviation affect almost the entire IBI domain, and regions impacted by thermal anomalies surpassing twice the standard deviation are also widespread below the 43ºN parallel. Extreme SST values exceeding twice the standard deviation affect not only the open ocean waters but also the easter boundary upwelling areas such as the northern half of Portugal, the Spanish Atlantic coast up to Cape Ortegal, and the African coast south of Cape Aguer. It is worth noting the impact of anomalies that exceed twice the standard deviation is widespread throughout the entire Mediterranean region included in this analysis. '''DOI (product):''' https://doi.org/10.48670/moi-00254

The SDC_MED_DP2 product contains 55 sliding decadal temperature fields (1955-1964, 1956-1965, 1957-1966, …, 2009-2018) at 1/8° horizontal resolution obtained in the 0-2000m layer and two derived OHC annual anomaly estimates for the 0-700m and the 0-2000m layers. Sliding decades of annual Temperature fields were obtained from an integrated Mediterranean Sea dataset covering the time period 1955-2018, which combines data extracted from SeaDataNet infrastructure at the end of July 2019 (SDC_MED_DATA_TS_V2, https://doi.org/10.12770/3f8eaace-9f9b-4b1b-a7a4-9c55270e205a) and the Coriolis Ocean Dataset for Reanalysis (CORA 5.2, accessed in July 2020, https://archimer.ifremer.fr/doc/00595/70726/). The resulting annual OHC anomaly time series span the 1960-2014 period. The analysis was performed with the DIVAnd (Data-Interpolating Variational Analysis in n dimensions), version 2.6.1.

This vector data set is the first public version released of the EU marine waters used for the implementation of the Marine Strategy Framework Directive (MSFD), submitted by the Member States to the European Commission. The Marine Strategy Framework Directive (MSFD) applies to all marine waters of EU Member States, which in Article 3 are defined as follows: (a) waters, the seabed and subsoil on the seaward side of the baseline from which the extent of territorial waters is measured extending to the outmost reach of the area where a Member State has and/or exercises jurisdictional rights, in accordance with the UNCLOS, with the exception of waters adjacent to the countries and territories mentioned in Annex II to the Treaty and the French Overseas Departments and Collectivities; and (b) coastal waters as defined by Directive 2000/60/EC, their seabed and their subsoil, in so far as particular aspects of the environmental status of the marine environment are not already addressed through that Directive or other Community legislation.

This study gathers multi-year environmental sequencing datasets generated within the French ROME pilot observatory network. It includes eDNA metabarcoding and RNA-based analyses from water samples, oyster tissues, and viral fractions collected across four French estuarine ecosystems between 2020 and 2023, supporting integrated monitoring of coastal microbiomes and microbial hazards.

This data set corresponds to the global offshore wind farm boundaries with the following attributes for each project: + WindfarmId (ID of the windfarm) + Name (Name of the windfarm) + Country (Country code) + Status (Status code) + WindfarmStatus (Windfarm Status or Project Status) + StatusComments (Comments on the Windfarm Status or Project Status) + CapacityMWMin (Capacity of the windfarm - Min) + CapacityMWMax (Capacity of the windfarm - Max) + NoTurbinesMin (Number of turbines - Min) + NoTurbinesMax (Number of turbines - Max) + Comments (Comments) + TurbineMWMin (Capacity of the turbine (set-up in the windfarm) - Min) + TurbineMWMax (Capacity of the turbine (set-up in the windfarm) - Max) + OtherNames (Other name of the windfarm) + CountryName (Country where the windfarm is set) + Lat (Geographic coordinate - centre latitude) + Lon (Geographic coordinate - centre longitude) + IsEstimatedLocation (This is where we know that a project exists but we don't know its exact location.) + IsOnHold + Developers (Developer(s) of the windfarm) + Owners (Owner of the windfarm) + Operators (Operator of the windfarm) + OffshoreConstructionStarts The frequency of the database release is monthly. This data set corresponds to the release of January 2020. This data set is strictly for internal EEA use as is subjected to a commercial license. Given the limited user subscriptions available, interested users should contact the SDI Team (sdi@eea.europa.eu) to be granted access to the data set.

This metadata describes the ICES data on the temporal development of the Lusitanian/Boreal species ratio in the period from 19657 to 2016. Key message: The ratio between the number of Lusitanian (warm-favouring) and Boreal (cool-favouring) species are significantly increasing in several North-East Atlantic marine areas whereas there is no significant changes in all the southern areas. Changes in ratios are most apparent in the North Sea, Irish Sea and West of Scotland. Furthermore, it seems that Lusitanian species have not spread in all northward directions, but have followed two particular routes, through the English Channel and north around Scotland Blue dots indicates L/B ratios below 1 (dominance of Boreal species) Yellow dots indicates L/B ratios >=1 and <2 (dominance of Lusitanian species) Red dots indicates L/B ratios >=2 (high dominance of Lusitanian species) The dataset is derived from the ICES data portal 'DATRAS' (the Database of Trawl Surveys). DATRAS is an online database of trawl surveys with access to standard data products. DATRAS stores data collected primarily from bottom trawl fish surveys coordinated by ICES expert groups. The survey data are covering the Baltic Sea, Skagerrak, Kattegat, North Sea, English Channel, Celtic Sea, Irish Sea, Bay of Biscay and the eastern Atlantic from the Shetlands to Gibraltar. At present, there are more than 56 years of continuous time series data in DATRAS, and survey data are continuously updated by national institutions. The dataset has been used in the EEA Indicator "Changes in fish distribution in European seas" https://www.eea.europa.eu/data-and-maps/indicators/fish-distribution-shifts/assessment-1. The dataset has been used for this static map: https://www.eea.europa.eu/en/analysis/indicators/changes-in-fish-distribution-in/temporal-development-of-the-ratio

The SDC_NAT_CLIM_TS_V2 product contains Temperature and Salinity Climatologies for the North Atlantic Ocean including the seasonal and monthly fields for 7 decades starting from 1950 to 2019. One resolution has been processed : 1/2°. The climatic fields were computed from the integrated North Atlantic Ocean dataset that combines data extracted from the 2 major sources: SeaDataNet infrastructure and Coriolis Ocean Dataset for Reanalysis (CORA). The computation was done with the DIVAnd software.