Habitats and biotopes
Type of resources
Available actions
Topics
Keywords
Contact for the resource
Provided by
Years
Formats
Representation types
Update frequencies
status
Scale
Resolution
-
160 whole genomes sequences obtained from 160 individual fish samples representing about 100 different species present in Gulf of Lion, and bay of Biscay.
-
The eleven collected wild strains of T. lutea were compared phenotypically, in particular with regard to their pigment and lipid profiles. The genome of each T. lutea strain was also sequenced to investigate the genetic structure and genome organisation of this species. Collected data were summarized in a genome browser to provide easy-to-use support for the scientific community (https://genomes-catalog.ifremer.fr). This provides an important resource- to understand, exploit and predict the biodiversity of this species.
-
This study aims to compare different metabarcoding sequences of commercially fished shrimps collected by tree counties on the North Brazil Shelf Large Marine Ecosystem
-
Metagenomic analysis of clams from Sanaga river in Cameroon to describe the virome
-
Dart Seq data gathered on Blue Shark in the framework of the PSTBS-IO project supported by funding from FAO, CSIRO Oceans and Atmosphere, AZTI Tecnalia, Institut de recherche pour le développement (IRD), and Research Institute for Tuna Fisheries (RITF) and financial assistance of the European Union (GCP/INT/233/EC – Population structure of IOTC species in the Indian Ocean), and POPSIZE project supported by FEAMP (2014-2020 UE N°508/2014), and Institut français de recherche pour l'Exploitation de la mer (Ifremer).
-
WGS for Iatlantic projet ( ) for assessing past and present connectivity
-
This dataset concerns sequences from the metabarcoding analysis (bacteria & archaea) of 4 hydrothermal sites from the TAG field (2 inactive sites & 2 weakly active sites) collected during the HERMINE2 oceanographic campaign.
-
In order to better characterize the fish biodiversity associated to the presence of cetaceans, especially the common Dolphin, from the Bay of Biscay, sequences from a 16S fragment were obtained from water samples acquired close to groups of dolphins.
-
The present data set concerne metabarcoding raw reads produced using 4 different PCR targeting polymerase or capside coding region of the genoyupe I and II of norovirus. Test samples of norovirus with serial dilutions in pure water and after a bio-accumulation in oysters. Sequencing was made after VirCapSeq-VERT approach.
-
ddRAD genotyping was used to evaluate population connectivity and putative loci under selection in honeycomb worm from 13 sites spanning its distribution in the Atlantic and Mediterranean coasts.
Catalogue PIGMA