Comparison between 3 kits, Roche, Twist Biosciences and Illumina on the ability to enrich environmental samples to viral sequences. 5 sewage samples were extracted in triplicats with selective extraction protocol.

This study aims to compare different metabarcoding sequences of commercially fished shrimps collected by tree counties on the North Brazil Shelf Large Marine Ecosystem

Genetic diversity is often considered a key factor in a species’ ability to adapt to environmental changes and our aim was to understand the biological, ecological, and biogeographic factors that explain differences in genetic diversity among marine fish. Therefore, whole genomes of 160 individual marine fish were sequenced to a minimum depth of 15×, enabling near-complete representation of each diploid genome.

WGS for Iatlantic projet ( ) for assessing past and present connectivity

Raw reads for the assembly of Gambusia holbrooki genome.

Sequenced samples are city center wastewater sampled by passive samplers. Variants are identified by Illumina Miseq sequencing.

This dataset consists of metatranscriptomic sequencing reads corresponding to coastal micro-eukaryote communities sampled in Western Europe in 2018 and 2019.

DNA sequencing of Crassostrea gigas Pacific oyster spat infected in the wild with OsHV-1 virus in 4 French oyster basins (Marennes Oleron Bay, Arcachon bay, Rade de Brest and Thau lagoon).

WGS of SARS-CoV-2 by Oxford Nanopore Technology from raw wastewater samples collected in France, 2020-2021

Vibrio bacteria sampled from juvenile oysters and seawater collected in Thau Lagoon (Languedoc-Roussillon, France) in October 2015 during a mortality event were genotyped using hsp60, rctB, topA and mreB protein-coding genes