This dataset consists of metatranscriptomic sequencing reads corresponding to coastal micro-eukaryote communities sampled in Western Europe in 2018 and 2019.

WGS for Iatlantic projet ( ) for assessing past and present connectivity

Raw reads for the assembly of Gambusia holbrooki genome.

WGS of SARS-CoV-2 by Oxford Nanopore Technology from raw wastewater samples collected in France, 2020-2021

Land-sea continuum microbiome analyses in 4 coastal French sites and in oysters aimed at evaluating human impact on coastal ecosystems and new potentiel microbiological sanitary risks.

Vibrio bacteria sampled from juvenile oysters and seawater collected in Thau Lagoon (Languedoc-Roussillon, France) in October 2015 during a mortality event were genotyped using hsp60, rctB, topA and mreB protein-coding genes

160 whole genomes sequences obtained from 160 individual fish samples representing about 100 different species present in Gulf of Lion, and bay of Biscay.

Fate and interaction between Microcystis and its microbiome in estuary.

Metagenomic analysis of clams from Sanaga river in Cameroon to describe the virome

Individuals from 5 populations were kept in common garden conditions in order to examine acclimation and adaptation to temperature in the honeycomb worm. Worms were exposed to 5 temperature treatments, and collected for RNAseq analysis. Gene expression patterns were then examined.