/Observational data/in-situ
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The European Union’s Copernicus-funded TRUSTED project (Towards Fiducial Reference Measurements of Sea-Surface Temperature by European Drifters) has deployed over 100 state of the art drifting buoys for improved validation of Sea Surface Temperature (SST) from the Sentinel-3 Sea and Land Surface Temperature Radiometers (SLSTR). These buoys are manufactured by NKE. The TRUSTED drifting buoys data and metadata are distributed in qualtity control NetCDF files, as a subset of DBCP drifting buoys GDAC (Global Data Assembly Centre). Coriolis DAC (Data Assembly Centre) routinely collects, decodes, quality controls, preserves and distributes data and metadata as NetCDF-CF files. The TRUSTED buoys have specific features managed by Coriolis DAC python data processing chain: a high resolution temperature sensor in addition to the classic drifting buoy temperature sensor. The high sampling and high resolution observations are distributed in specific variables TEMP_HR, TEMP_HR_SPOT, TEMP_HR_XX (XX is the percentile sample).
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The data-set is composed of three tables, Environmental variables, Phytoplankton ( in log+1 abundance) and the coordinates of the station used in the study. They are the processed data.
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Inorganic carbon and alkalinity measurements (in micromoles/kg) along the coast of Brazil, 2013-2015.
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Inorganic carbon and alkalinity measurements (in micromoles/kg) from Brazilian cruises in the Western Tropical Atlantic.
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Observations of Sea surface temperature and salinity are now obtained from voluntary sailing ships using medium or small size sensors. They complement the networks installed on research vessels or commercial ships. The delayed mode dataset proposed here is upgraded annually as a contribution to GOSUD (http://www.gosud.org )
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French Zostera Marina et Zostera Noltei abundance data are collected during monitoring surveys on the English Channel / Bay of Biscay coasts. Protocols are impletmented in the Water Framework Directive. Data are transmitted in a Seadatanet format (CDI + ODV) to EMODnet Biology european database. 35 ODV files have been generated from period 01/01/2004 to 31/12/2021 for Z. Marina and from 01/01/2011 to 31/12/2021 for Z. Noltei.
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Sardine physiological measurments from september to november 2020
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French intertidal and subtidal Macroalgae taxa data are collected during monitoring surveys on the English Channel / Bay of Biscay coasts. Protocols are implemented in the Water Framework Directive. Data are transmitted in a Seadatanet format (CDI + ODV) to EMODnet Biology european database. 131 ODV files have been generated from period 01/01/2006 to 31/12/2021.
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During the SARDINIA experiment, three coincident MCS reflection and wide-angle seismic profiles, sub-bottom high resolution (CHIRP) profiles, and bathymetry data were collected on the Gulf of Lion margin. The seismic reflection data were acquired using a 4.5 km, 360 trace digital streamer and a tuned airgun array of 8260 in3, towed at a depth of 18-28 m. A total of 57 ocean bottom seismometer/ hydrophones (OBS/OBH) from Ifremer, University of Brest, and Geomar Kiel were deployed in the Gulf of Lion, spaced every 7 Nm (~13 km). The airgun array consists of 16 airguns ranging from 100 in3 G-guns to 16 L Bolt airguns, with main frequencies centered around 10-15 Hz. The airguns were tuned to the first bubble to enhance low frequencies and ensure a good penetration. The shot interval was 60 s at an average speed of 5 knots, which translates to a trace spacing of about 140-150 m. The sample rate was 8 ms for the micrOBS, 5 ms for the Geomar’s OBS and 4 ms for the OldOBS. A total of 6160 shots (profile AB: 3032, profile CD: 1730, profile EF: 1398) were fired by the air gun array. Profile AB crosses the Gulf of Lion’s margin, parallel to the ECORS profile, from the continental shelf to Domain III. Twenty-five ocean bottom seismometers (OBS) were deployed on this profile, of 467 km in length. Twenty-two instruments were used in the wide-angle modelling, since three instruments (OBS 45, 49 and 52) did not properly record. The shots on this profile were additionally recorded by 9 land seismic stations (OSIRIS stations from the University of Brest and Geosciences Azur) that have extended the marine profile ~120 km onshore. Profiles CD and EF are 250 and 210 km long transects parallel to the margin. Profile CD was acquired using 19 OBS of which 18 yielded usable data. Profile EF was acquired using 15 OBS of which 12 yielded usable data. These two profiles cross the profile AB, respectivelyat OBS 26 and OBS 8.
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Worldwide, shellfish aquaculture and fisheries in coastal ecosystems represent crucial activities for human feeding. But these biological productions are under the pressure of climate variability and global change. Anticipating the biological processes affected by climate hazards remains a vital objective for species conservation strategies and human activities that rely on. Within marine species, filter feeders like oysters are real key species in coastal ecosystems due to their economic and societal value (fishing and aquaculture) but also due to their ecological importance. Indeed oysters populations in good health play the role of ecosystem engineers that can give many ecosystem services at several scales: building reef habitats that contribute to biodiversity, benthic-pelagic coupling and phytoplankton bloom control through water filtration, living shorelines against coastal erosion… The Pacific oyster, Crassostrea gigas (Thunberg, 1793), which is currently widespread worldwide, was introduced into the Atlantic European coasts at the end of the 19th century for shellfish culture purposes and becomes the main marine species farmed in France (around 100 000 tons) despite severe mortalities crisis. But in the same time and because of warming, natural oysters beds has spread significantly along the French coast and are supposed to have reach approximately 500 000 tons. In that context, Pacific oyster populations (natural and cultivated) in France are the subjects of many scientific projects. Among them, a specific long-term biological monitoring focuses on the reproduction of these populations at a national scale: the VELYGER national program. With more than 8 years of weekly data at many stations in France, this field-monitoring program offers a valuable dataset for studying processes underpinning reproduction cycle of this key-species in relation to environmental parameters, water quality and climate change. Database content: Larval concentration (number of individuals per 1.5 m3) monitored, since 2008, at several stations in six bays of the French coast (from south to north): Thau Lagoon and bays of Arcachon, Marennes Oléron, Bourgneuf, Vilaine and Brest (see map below). Methods used to monitor larval concentration: An important volume of seawater (1.5 m3) is pumped twice a week throughout the spawning season (june-september), at one meter below the surface at high tide (+/- 2h) in several sites within each VELYGER ecosystem. Water is filtered trough plankton net fitted with 40 µm mesh. After a proper rinsing of the net, the retained material is transferred into a polyethylene bottle (1 liter) and fixed with alcohol. At laboratory, sample is then gently filtered and rinse again and transferred into eprouvette. Two sub-samples of 1 mL are then taken using a pipette and examined on a graticule slide for microscope. The microscopic examination is made with a conventional binocular optical microscope with micrometer stage at a magnification of 10 X (or above). During the counting, a special care is necessary as larvae of other bivalves are also collected and confusion is possible. Larvae of C. gigas are also classified into four stage of development: - Stage I = D-shaped straight hinge larvae (shell length <105 µm) - Stage II = Early umbo evolved larvae (shell length between 105 and 150 µm) - Stage III = Medium umbo larvae (shell length between 150 and 235 µm) - Stage IV*= Large umbo eyed pediveliger larvae (shell length > 235 µm) * Larvae that are very closed to settle are sometimes identified into a separated 5th stage, but generally this stage is included in stage IV. Illustrations: Location of the different Velyger sites along the French coast. From south to north: Thau Lagoon and bays of Arcachon, Marennes Oléron, Bourgneuf, Vilaine and Brest. Legend: Pacific Oyster Larvae (left side) and Natural oyster bed (right side). Photos : © S. Pouvreau/Ifremer
Catalogue PIGMA