The ABYSS project aims at describing deep-sea benthic biodiversity spanning several branches of the tree of life with eDNA metabarcoding tools. To accommodate both micro- and macro biologists, we designed a bioinformatic pipeline based on Illumina read correction with Dada2 allowing analysing metabarcodes from prokaryotic and eukaryotic life compartments.

The grid is based on proposal at the 1st European Workshop on Reference Grids in 2003 and later INSPIRE geographical grid systems. The sample grid available here is part of a set of three polygon grids in 1, 10 and 100 kilometres. The grids cover at least country borders and, where applicable, marine Exclusive Economic Zones v7.0, http://www.marineregions.org. Note that the extent of the grid into the marine area does not reflect the extent of the territorial waters.

This metadata corresponds to the EUNIS Coastal habitat types, distribution based on vegetation plot data dataset. Coastal habitats are those above spring high tide limit (or above mean water level in non-tidal waters) occupying coastal features and characterised by their proximity to the sea, including coastal dunes and wooded coastal dunes, beaches and cliffs. Includes free-draining supralittoral habitats adjacent to marine habitats which are normally only very rarely subject to any type of salt water, in as much as they may be inhabited predominantly by terrestrial species, strandlines characterised by terrestrial invertebrates and moist and wet coastal dune slacks and dune-slack pools. Supralittoral sands and wracks may be found also in marine habitats (M). Excludes supralittoral rock pools and habitats, the splash zone immediately above the the mean water line, as well the spray zone and zone subject to sporadic inundation with salt water in as much as it may be inhabited predominantly by marine species, which are included in marine (M). The verified coastal habitat samples used are derived from the Braun-Blanquet database (http://www.sci.muni.cz/botany/vegsci/braun_blanquet.php?lang=en) which is a centralised database of vegetation plots and comprises copies of national and regional databases using a unified taxonomic reference database. The geographic extent of the distribution data are all European countries except Armenia and Azerbaijan. The dataset is provided both in Geodatabase and Geopackage formats.

This metadata corresponds to the EUNIS Littoral biogenic habitat (salt marshes) types, predicted distribution of habitat suitability dataset. Littoral habitats are those formed by animals such as worms and mussels or plants (salt marshes). The verified littoral biogenic habitat samples used are derived from the Braun-Blanquet database (http://www.sci.muni.cz/botany/vegsci/braun_blanquet.php?lang=en) which is a centralised database of vegetation plots and comprises copies of national and regional databases using a unified taxonomic reference database. The geographic extent of the distribution data are all European countries except Armenia and Azerbaijan. The modelled suitability for EUNIS saltmarsh habitat types is an indication of where conditions are favourable for the habitat type based on sample plot data (Braun-Blanquet database) and the Maxent software package. The modelled suitability map may be used as a proxy for the geographical distribution of the habitat type. However, note that it is not representing the actual distribution of the habitat type. As predictors for the suitabilty modelling not only Climate and Soil parameters have been taken into account, but also so-called RS-EVB's, Remote Sensing-enabled Essential Biodiversity Variables like Landuse, Vegetation height, Phenology, LAI(Leave Area Index) and Population density. Because the EBV's are restricted by the extent of the Remote Sensing data (EEA38 countries and the United Kingdom) the modelling result does also not go beyond this boundary. The dataset is provided both in Geodatabase and Geopackage formats. The Training map files show the modelled suitable distribution, omitting the 10% of occurrence records in the least suitable environment under the assumption that they are not representative of the overall suitable habitat distribution. The 10 percentile training presence is an arbitrary threshold which omits all regions with habitat suitability lower than the suitability values for the lowest 10% of occurrence records.

Resomar is a French national network of marine stations and observatories for exchanging and collaboration on scientific projects, studies and monitoring programmes. In 2007, the CNRS/INSU launched a programme with a view to giving new life to RESOMAR (formerly RNSM and then RNSLM), and to made it a strategic tool for enhancing coastal marine biology studies at a national level. This network has been given the task of scientifically collating and exploiting biological databased relating to the components of benthic and pelagic ecosystems on the French coast.

This metadata corresponds to the EUNIS Littoral biogenic habitat types (salt marshes), distribution based on vegetation plot data dataset. Littoral biogenic habitats (commonly known as salt marshes) are formed by animals such as worms and mussels or plants. The verified saltmarsh habitat samples used are derived from the Braun-Blanquet database (http://www.sci.muni.cz/botany/vegsci/braun_blanquet.php?lang=en) which is a centralised database of vegetation plots and comprises copies of national and regional databases using a unified taxonomic reference database. The geographic extent of the distribution data are all European countries except Armenia and Azerbaijan. The dataset is provided both in Geodatabase and Geopackage formats.

The raster dataset represents the intensity of species disturbance due to human presence along European coastlines. The dataset was created by combining the coastal urbanisation layer derived from Corine Land Cover 2012 (with the percentage of urbanised coastline per EEA 10 km grid cell) and the population density layer based on EUROSTAT NUTS 2016 data (with the population density in the NUTS 3 region corresponding to the coastal EEA 10 km grid cell). The dataset does not cover southern and western Mediterranean Sea, northern Black Sea and northernmost Atlantic Ocean. The dataset was prepared for the combined effect index produced for the ETC/ICM Report 4/2019 "Multiple pressures and their combined effects in Europe's seas" available on: https://www.eionet.europa.eu/etcs/etc-icm/etc-icm-report-4-2019-multiple-pressures-and-their-combined-effects-in-europes-seas-1.

The dataset presents the potential combined effects of land-based pressures on marine species and habitats estimated using the method for assessment of cumulative effects, for the entire suite of pressures and a selected set of marine species groups and habitats by an index (Halpern et al. 2008). The spatial assessment of combined effects of multiple pressures informs of the risks of human activities on the marine ecosystem health. The methodology builds on the spatial layers of pressures and ecosystem components and on an estimate of ecosystem sensitivity through an expert questionnaire. The raster dataset consists of a division of the Europe's seas in 10km and 100 km grid cells, which values represents the combined effects index values for pressures caused by land-based human activities. The relative values indicate areas where the pressures potentially affect the marine ecosystem. This dataset underpins the findings and cartographic representations published in the report "Marine Messages" (EEA, 2020).

This data set presents the resulting assessment grid (based on the EEA reference grid) with the classification of chemical status of the transitional, coastal and marine waters in the context of the Water Framework Directive (WFD) and the Marine Strategy Framework Directive (MSFD), providing a mapping of contamination 'problem areas' and 'non-problem areas' based on measurements of biological effects. This classification has been performed using the CHASE+ tool, with classifications of the of contaminant status of indicators of biological effects. The status is evaluated in five classes, where NPAhigh and NPAgood are recognised as ‘non-problem areas’ and PAmoderate, PApoor and PAbad are recognised as ‘problem areas’. Monitoring biological effects is restricted to a few indicators (e.g. imposex) and data coverage is currently limited. Biological effects have thus been addressed in only 134 assessment units, mostly in the Baltic Sea, the North Sea and the North-East Atlantic Ocean. This data set underpins the findings and cartographic representations published in the EEA report “Contaminants in Europe’s seas” (No 25/2018). See the mentioned report for further information.

This dataset presents the resulting assessment grid (based on the EEA reference grid) with the classification of ecosystem health of the transitional, coastal and marine waters in the context of the Water Framework Directive (WFD) and the Marine Strategy Framework Directive (MSFD). This classification has been performed using the MESH+ (Marine EcoSystem Health) tool. The MESH+ tool builds on the EEA assessment tools developed and applied in the context of assessing the degree of contamination (CHASE+), eutrophication (HEAT+) and biodiversity (BEAT+) in Europe's seas (EEA, 2018a, 2019c; Vaughan et al., 2019). MESH+ makes use of the same data sets and threshold values used in these assessments but recombines these in a new framework that addresses 'ecosystem condition'. The overall area of interest used is based on the marine regions and subregions under the MSFD. Additionally, Norwegian (Barents Sea and Norwegian Sea) and Icelandic waters (’Iceland Sea’) have been added (see Surrounding seas of Europe). Note that within the North East Atlantic region only the subregions within EEZ boundaries (~200 nm) have been included. The spatial resolution of the assessment grid is 20 km x 20 km in coastal areas and 100 km x 100 km in offshore areas. This dataset underpins the findings and cartographic representations published in the report "Marine Messages II" (EEA, 2020): https://www.eea.europa.eu/publications/marine-messages-2