oceans
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'''Short description:''' Near-Real-Time multi-mission global satellite-based spectral integral parameters. Only valid data are used, based on the L3 corresponding products. Included wave parameters are partition significant wave height, partition peak period and partition peak or principal direction. Those parameters are propagated in space and time at a 3-hour timestep and on a regular space grid, providing information of the swell propagation characteristics, from source to land. The ouput products corresponds to one file per month gathering all the swell systems at a global scale. This product is processed by the WAVE-TAC multi-mission SAR and CFOSAT/SWIM data processing system to serve in near-real time the main operational oceanography and climate forecasting centers in Europe and worldwide. It processes data from the following missions: SAR (Sentinel-1A and Sentinel-1B) and CFOSAT/SWIM. All the spectral parameter measurements are optimally interpolated using swell observations belonging to the same swell field. The spectral data processing system produces wave integral parameters by partition (partition significant wave height, partition peak period and partition peak or principal direction) and the associated standard deviation and density of propagated observations. '''DOI (product) :''' https://doi.org/10.48670/moi-00175
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'''Short description:''' The High-Resolution Ocean Colour (HR-OC) Consortium (Brockmann Consult, Royal Belgian Institute of Natural Sciences, Flemish Institute for Technological Research) distributes Remote Sensing Reflectances (RRS, expressed in sr-1), Turbidity (TUR, expressed in FNU), Solid Particulate Matter Concentration (SPM, expressed in mg/l), spectral particulate backscattering (BBP, expressed in m-1) and chlorophyll-a concentration (CHL, expressed in µg/l) for the Sentinel 2/MSI sensor at 100m resolution for a 20km coastal zone. RRS and BBP are delivered at nominal central bands of 443, 492, 560, 665, 704, 740, 783, 865 nm. The primary variable from which it is virtually possible to derive all the geophysical and transparency products is the spectral RRS. This, together with the spectral BBP, constitute the category of the 'optics' products. The spectral BBP product is generated from the RRS products using a quasi-analytical algorithm (Lee et al. 2002). The 'tur_tsm_chl' products include TUR, SPM and CHL). They are retrieved through the application of automated switching algorithms to the RRS spectra adapted to varying water conditions (Novoa et al. 2017). The GEOPHYSICAL product consists of the Chlorophyll-a concentration (CHL) retrieved via a multi-algorithm approach with optimized quality flagging (O'Reilly et al. 2019, Gons et al. 2005, Lavigne et al. 2021). The NRT products are generally provided withing 24 hours up to 3 days after end of the day. The RRS product is accompanied by a relative uncertainty estimate (unitless) derived by direct comparison of the products to corresponding fiducial reference measurements provided through the AERONET-OC network. '''Processing information:''' The HR-OC processing system is deployed on Creodias where Sentinel 2/MSI L1C data are available. The production control element is being hosted within the infrastructure of Brockmann Consult. The processing chain consists of: * Resampling to 60m and mosaic generation of the set of Sentinel-2 MSI L1C granules of a single overpass that cover a single UTM zone. * Application of a glint correction taking into account the detector viewing angles * Application of a coastal mask with 20km water + 20km land. The result is a L1C mosaic tile with data just in the coastal area optimized for compression. * Level 2 processing with pixel identification (IdePix), atmospheric correction (C2RCC and ACOLITE or iCOR), in-water processing and merging (HR-OC L2W processor). The result is a 60m product with the same extent as the L1C mosaic, with variables for optics, transparency, and geophysics, and with data filled in the water part of the coastal area. * invalid pixel identification takes into account corrupted (L1) pixels, clouds, cloud shadow, glint, dry-fallen intertidal flats, coastal mixed-pixels, sea ice, melting ice, floating vegetation, non-water objects, and bottom reflection. * Daily L3 aggregation merges all Level 2 mosaics of a day intersecting with a target tile. All valid water pixels are included in the 20km coastal stripes; all other values are set to NaN. There may be more than a single overpass a day, in particular in the northern regions. The main contribution usually is the mosaic of the zone, but also adjacent mosaics may overlap. This step comprises resampling to the 100m target grid. * Monthly L4 aggregation combines all Level 3 products of a month. The output is a set of 32 NetCDF datasets for (1) optics and (2) transparency, suspended matter and chlorophyll concentration respectively per month. * Gap filling combines all daily products of a period and generates (partially) gap-filled daily products again. The output of gap filling are 32 datasets for optics (BBP443 only), and (2) transparency, suspended matter and chlorophyll concentration and geophysics per day. '''Description of observation methods/instruments:''' Ocean colour technique exploits the emerging electromagnetic radiation from the sea surface in different wavelengths. The spectral variability of this signal defines the so-called ocean colour which is affected by the presence of phytoplankton. '''Quality / Accuracy / Calibration information:''' A detailed description of the calibration and validation activities performed over this product can be found on the CMEMS web portal and in CMEMS-BGP_HR-QUID-009-201to212. '''Suitability, Expected type of users / uses:''' This product is meant for use for educational purposes and for the managing of the marine safety, marine resources, marine and coastal environment and for climate and seasonal studies. '''Dataset names: ''' *cmems_obs_oc_med_bgc_tur-spm-chl_nrt_l3-hr-mosaic_P1D-m *cmems_obs_oc_med_bgc_optics_nrt_l3-hr-mosaic_P1D-v01 '''Files format:''' *netCDF-4, CF-1.7 *INSPIRE compliant." '''DOI (product) :''' https://doi.org/10.48670/moi-00109
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Monthly time series of Total Nitrogen [mg/l] from model data
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Moving 6-year analysis of Water body chlorophyll-a in the NorthEast Atlantic for each season: - winter: January-March, - spring: April-June, - summer: July-September, - autumn: October-December. Every year of the time dimension corresponds to the 6-year centred average of each season. 6-year periods span from 1971/1976 until 2016/2021. Observation data span from 1971 to 2021. High-frequency observation trails were filtered to a 3h temporal resolution. Depth levels (IODE standard depths): [0.0, 5.0, 10.0, 20.0, 30.0, 40.0, 50.0, 75.0, 100.0, 125.0, 150.0, 200.0, 250.0, 300.0]. Data sources: observational data from SeaDataNet/EMODNet Chemistry Data Network. Descrption of DIVAnd analysis: the computation was done with DIVAnd (Data-Interpolating Variational Analysis in n dimensions), version 2.7.4, using GEBCO 30 sec topography for the spatial connectivity of water masses. The horizontal resolution of the produced DIVAnd maps is 0.1 degrees. Horizontal correlation length varies from 200km in open sea regions to 50km at the coast. Vertical correlation length is defined as twice the vertical resolution. Signal-to-noise ratio was fixed to 1 for vertical profiles and 0.1 for time series to account for the redundancy in the time series observations. A logarithmic transformation (DIVAnd.Anam.loglin) was applied to the data prior to the analysis to avoid unrealistic negative values. Background field: a vertically-filtered profile of the seasonal data mean value (including all years) is substracted from the data. Detrending of data: no, advection constraint applied: no. Units: mg/m3.
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Here, we provide plankton image data that was sorted with the web applications EcoTaxa and MorphoCluster. The data set was used for image classification tasks as described in Schröder et. al (in preparation) and does not include any geospatial or temporal meta-data. Plankton was imaged using the Underwater Vision Profiler 5 (Picheral et al. 2010) in various regions of the world's oceans between 2012-10-24 and 2017-08-08. This data publication consists of an archive containing "training.csv" (list of 392k training images for classification, validated using EcoTaxa), "validation.csv" (list of 196k validation images for classification, validated using EcoTaxa), "unlabeld.csv" (list of 1M unlabeled images), "morphocluster.csv" (1.2M objects validated using MorphoCluster, a subset of "unlabeled.csv" and "validation.csv") and the image files themselves. The CSV files each contain the columns "object_id" (a unique ID), "image_fn" (the relative filename), and "label" (the assigned name). The training and validation sets were sorted into 65 classes using the web application EcoTaxa (http://ecotaxa.obs-vlfr.fr). This data shows a severe class imbalance; the 10% most populated classes contain more than 80% of the objects and the class sizes span four orders of magnitude. The validation set and a set of additional 1M unlabeled images were sorted during the first trial of MorphoCluster (https://github.com/morphocluster). The images in this data set were sampled during RV Meteor cruises M92, M93, M96, M97, M98, M105, M106, M107, M108, M116, M119, M121, M130, M131, M135, M136, M137 and M138, during RV Maria S Merian cruises MSM22, MSM23, MSM40 and MSM49, during the RV Polarstern cruise PS88b and during the FLUXES1 experiment with RV Sarmiento de Gamboa. The following people have contributed to the sorting of the image data on EcoTaxa: Rainer Kiko, Tristan Biard, Benjamin Blanc, Svenja Christiansen, Justine Courboules, Charlotte Eich, Jannik Faustmann, Christine Gawinski, Augustin Lafond, Aakash Panchal, Marc Picheral, Akanksha Singh and Helena Hauss In Schröder et al. (in preparation), the training set serves as a source for knowledge transfer in the training of the feature extractor. The classification using MorphoCluster was conducted by Rainer Kiko. Used labels are operational and not yet matched to respective EcoTaxa classes.
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This visualization product displays the density of floating micro-litter per net normalized per m³ per year from specific protocols different from research and monitoring protocols. EMODnet Chemistry included the collection of marine litter in its 3rd phase. Before 2021, there was no coordinated effort at the regional or European scale for micro-litter. Given this situation, EMODnet Chemistry proposed to adopt the data gathering and data management approach as generally applied for marine data, i.e., populating metadata and data in the CDI Data Discovery and Access service using dedicated SeaDataNet data transport formats. EMODnet Chemistry is currently the official EU collector of micro-litter data from Marine Strategy Framework Directive (MSFD) National Monitoring activities (descriptor 10). A series of specific standard vocabularies or standard terms related to micro-litter have been added to SeaDataNet NVS (NERC Vocabulary Server) Common Vocabularies to describe the micro-litter. European micro-litter data are collected by the National Oceanographic Data Centres (NODCs). Micro-litter map products are generated from NODCs data after a test of the aggregated collection including data and data format checks and data harmonization. A filter is applied to represent only micro-litter sampled according to a very specific protocol such as the Volvo Ocean Race (VOR) or Oceaneye. Densities were calculated for each net using the following calculation: Density (number of particles per m³) = Micro-litter count / Sampling effort (m³) When the number of micro-litters was not filled, it was not possible to calculate the density. Percentiles 50, 75, 95 & 99 have been calculated taking into account data for all years. Warning: the absence of data on the map does not necessarily mean that they do not exist, but that no information has been entered in the National Oceanographic Data Centre (NODC) for this area.
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'''DEFINITION''' Variations of the Mediterranean Outflow Water at 1000 m depth are monitored through area-averaged salinity anomalies in specifically defined boxes. The salinity data are extracted from several CMEMS products and averaged in the corresponding monitoring domain: * IBI-MYP: IBI_MULTIYEAR_PHY_005_002 * IBI-NRT: IBI_ANALYSISFORECAST_PHYS_005_001 * GLO-MYP: GLOBAL_REANALYSIS_PHY_001_030 * CORA: INSITU_GLO_TS_REP_OBSERVATIONS_013_002_b * ARMOR: MULTIOBS_GLO_PHY_TSUV_3D_MYNRT_015_012 The anomalies of salinity have been computed relative to the monthly climatology obtained from IBI-MYP. Outcomes from diverse products are combined to deliver a unique multi-product result. Multi-year products (IBI-MYP, GLO,MYP, CORA, and ARMOR) are used to show an ensemble mean and the standard deviation of members in the covered period. The IBI-NRT short-range product is not included in the ensemble, but used to provide the deterministic analysis of salinity anomalies in the most recent year. '''CONTEXT''' The Mediterranean Outflow Water is a saline and warm water mass generated from the mixing processes of the North Atlantic Central Water and the Mediterranean waters overflowing the Gibraltar sill (Daniault et al., 1994). The resulting water mass is accumulated in an area west of the Iberian Peninsula (Daniault et al., 1994) and spreads into the North Atlantic following advective pathways (Holliday et al. 2003; Lozier and Stewart 2008, de Pascual-Collar et al., 2019). The importance of the heat and salt transport promoted by the Mediterranean Outflow Water flow has implications beyond the boundaries of the Iberia-Biscay-Ireland domain (Reid 1979, Paillet et al. 1998, van Aken 2000). For example, (i) it contributes substantially to the salinity of the Norwegian Current (Reid 1979), (ii) the mixing processes with the Labrador Sea Water promotes a salt transport into the inner North Atlantic (Talley and MacCartney, 1982; van Aken, 2000), and (iii) the deep anti-cyclonic Meddies developed in the African slope is a cause of the large-scale westward penetration of Mediterranean salt (Iorga and Lozier, 1999). Several studies have demonstrated that the core of Mediterranean Outflow Water is affected by inter-annual variability. This variability is mainly caused by a shift of the MOW dominant northward-westward pathways (Bozec et al. 2011), it is correlated with the North Atlantic Oscillation (Bozec et al. 2011) and leads to the displacement of the boundaries of the water core (de Pascual-Collar et al., 2019). The variability of the advective pathways of MOW is an oceanographic process that conditions the destination of the Mediterranean salt transport in the North Atlantic. Therefore, monitoring the Mediterranean Outflow Water variability becomes decisive to have a proper understanding of the climate system and its evolution (e.g. Bozec et al. 2011, Pascual-Collar et al. 2019). The CMEMS IBI-OMI_WMHE_mow product is aimed to monitor the inter-annual variability of the Mediterranean Outflow Water in the North Atlantic. The objective is the establishment of a long-term monitoring program to observe the variability and trends of the Mediterranean water mass in the IBI regional seas. To do that, the salinity anomaly is monitored in key areas selected to represent the main reservoir and the three main advective spreading pathways. More details and a full scientific evaluation can be found in the CMEMS Ocean State report Pascual et al., 2018 and de Pascual-Collar et al. 2019. '''CMEMS KEY FINDINGS''' The absence of long-term trends in the monitoring domain Reservoir (b) suggests the steadiness of water mass properties involved on the formation of Mediterranean Outflow Water. Results obtained in monitoring box North (c) present an alternance of periods with positive and negative anomalies. The last negative period started in 2016 reaching up to the present. Such negative events are linked to the decrease of the northward pathway of Mediterranean Outflow Water (Bozec et al., 2011), which appears to return to steady conditions in 2020 and 2021. Results for box West (d) reveal a cycle of negative (2015-2017) and positive (2017 up to the present) anomalies. The positive anomalies of salinity in this region are correlated with an increase of the westward transport of salinity into the inner North Atlantic (de Pascual-Collar et al., 2019), which appear to be maintained for years 2020-2021. Results in monitoring boxes North and West are consistent with independent studies (Bozec et al., 2011; and de Pascual-Collar et al., 2019), suggesting a westward displacement of Mediterranean Outflow Water and the consequent contraction of the northern boundary. Note: The key findings will be updated annually in November, in line with OMI evolutions. '''DOI (product):''' https://doi.org/10.48670/moi-00258
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'''Short Description:''' The ocean physics reanalysis for the North-West European Shelf is produced using an ocean assimilation model, with tides, at 7 km horizontal resolution. The ocean model is NEMO (Nucleus for European Modelling of the Ocean), using the 3DVar NEMOVAR system to assimilate observations. These are surface temperature and vertical profiles of temperature and salinity. The model is forced by lateral boundary conditions from the GloSea5, one of the multi-models used by [https://resources.marine.copernicus.eu/?option=com_csw&view=details&product_id=GLOBAL_REANALYSIS_PHY_001_026 GLOBAL_REANALYSIS_PHY_001_026] and at the Baltic boundary by the [https://resources.marine.copernicus.eu/?option=com_csw&view=details&product_id=BALTICSEA_REANALYSIS_PHY_003_011 BALTICSEA_REANALYSIS_PHY_003_011]. The atmospheric forcing is given by the ECMWF ERA5 atmospheric reanalysis. The river discharge is from a daily climatology. Further details of the model, including the product validation are provided in the [https://documentation.marine.copernicus.eu/QUID/CMEMS-NWS-QUID-004-009.pdf CMEMS-NWS-QUID-004-009]. Products are provided as monthly and daily 25-hour, de-tided, averages. The datasets available are temperature, salinity, horizontal currents, sea level, mixed layer depth, and bottom temperature. Temperature, salinity and currents, as multi-level variables, are interpolated from the model 51 hybrid s-sigma terrain-following system to 24 standard geopotential depths (z-levels). Grid-points near to the model boundaries are masked. The product is updated biannually provinding six-month extension of the time series. See [https://documentation.marine.copernicus.eu/PUM/CMEMS-NWS-PUM-004-009-011.pdf CMEMS-NWS-PUM-004-009_011] for further details. '''Associated products:''' This model is coupled with a biogeochemistry model (ERSEM) available as CMEMS product [https://resources.marine.copernicus.eu/?option=com_csw&view=details&product_id=NWSHELF_MULTIYEAR_BGC_004_011]. An analysis-forecast product is available from [https://resources.marine.copernicus.eu/?option=com_csw&view=details&product_id=NWSHELF_ANALYSISFORECAST_PHY_LR_004_001 NWSHELF_ANALYSISFORECAST_PHY_LR_004_011]. The product is updated biannually provinding six-month extension of the time series. '''DOI (product) :''' https://doi.org/10.48670/moi-00059
Catalogue PIGMA