Catalogue PIGMA
Whole genome sequences of 160 fish
160 whole genomes sequences obtained from 160 individual fish samples representing about 100 different species present in Gulf of Lion, and bay of Biscay.
Simple
- Date (Creation)
- 2021-03-01
- Date (Publication)
- 2022-01-05
- Identifier
- FR-330-715-368-00032-IFR_BIOINFO_SEQ_160_FISH_GOLF_LION_BISCAY
- Identifier
- DOI:10.12770/47a8e408-9612-4228-a655-e26d9e70745c
- Credit
- Project FORESEA
Author
IFREMER/MARBEC-LEGPM
-
Lapegue Sylvie
Université de Montpellier - Campus Triolet - Place E. Bataillon - CC080 - 34095 Montpellier Cedex 5
,
Montpellier
,
France
Author
IFREMER/MARBEC-LEGPM
-
Cornette Florence
Station de Sète - Avenue Jean Monnet - CS 30171 - 34203 Sète Cedex
,
Sete
,
France
04 99 57 32 84
Author
IFREMER/MARBEC-LEGPM
-
Ernande Bruno
Université de Montpellier - Campus Triolet - 2 Place E. Bataillon - CC080 (IHPE) - 34095 Montpellier Cedex 5
,
Montpellier
,
France
04 67 14 45 66
- GEMET - INSPIRE themes, version 1.0
-
- Habitats and biotopes
- Thèmes Sextant
-
- /Biological Environment/Bioinformatics
- Use limitation
- CC-BY (Creative Commons - Attribution)
- Access constraints
- License
- Use constraints
- License
- Other constraints
- Data available upon request to authors.
- Spatial representation type
- Grid
- Metadata language
- English
- Character set
- UTF8
N
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W
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- Reference system identifier
- EPSG / WGS 84 (EPSG:4326) / 8.6
Spatial representation info
No information provided.
- Number of dimensions
- 0
- Cell geometry
- Area
- Distribution format
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(
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- OnLine resource
- /home/ref-bioinfo-extranet/ifremer/marbec/foresea/ ( NETWORK:LINK )
- OnLine resource
- Digital Object Identifier (DOI) ( WWW:LINK-1.0-http--metadata-URL )
- Hierarchy level
- Dataset
- Statement
- A total of 160 fish samples obtained from several Ifremer fish surveys, or costal sampling were sequenced (2x150 paired-end, 20X) on a single Illumina NovaSaq6000 Flow Cell S4. The objectives are to estimate the intraspecific genetic diversity of those species and determine the main functional traits influencing this diversity.
- File identifier
- 47a8e408-9612-4228-a655-e26d9e70745c XML
- Metadata language
- English
- Character set
- UTF8
- Hierarchy level
- Dataset
- Date stamp
- 2023-06-27T13:07:02.022Z
- Metadata standard name
- ISO 19115:2003/19139 - SEXTANT
- Metadata standard version
- 1.0
Point of contact
IFREMER
-
Lapegue Sylvie
Université de Montpellier - Campus Triolet - Place E. Bataillon - CC080 - 34095 Montpellier Cedex 5
,
Montpellier
,
France
Overviews
Spatial extent
N
S
E
W
Provided by
Associated resources
Not available