This data set presents the resulting assessment grid (based on the EEA reference grid) with the classification of chemical status of the transitional, coastal and marine waters in the context of the Water Framework Directive (WFD) and the Marine Strategy Framework Directive (MSFD), with a mapping of contamination 'problem areas' and ‘non-problem areas’ based on measurements in the matrix 'biota'. This classification has been performed using the CHASE+ tool, with classifications of the biota matrix. The chemical status is evaluated in five classes, where NPAhigh and NPAgood are recognised as ‘non-problem areas’ and PAmoderate, PApoor and PAbad are recognised as ‘problem areas’. Monitoring and assessment for the matrix 'biota' has been carried out in the North-East Atlantic Ocean (482 assessment units), Baltic sea (198 assessment units), Mediterranean Sea (161 assessment units) and Black sea (12 assessment units). This data set underpins the findings and cartographic representations published in the EEA report “Contaminants in Europe’s seas” (No 25/2018): https://www.eea.europa.eu/publications/contaminants-in-europes-seas. See the mentioned report for further information as well as examples of classification excluding specific groups of substances (e.g. metals, PBDEs).

The raster dataset represents the risk of collision of whales with vessels in Europe Seas. The most vulnerable species from ship strikes are cetaceans and turtles, since they go to the surface to breathe. On the other hand, their migration routes can overlap with shipping lanes. The collisions can produce the death or injury of the animals, and are an important threat for the conservation of these species. The dataset has been prepared in the context of the development of the first European Maritime Transport Environmental Report (EMSA-EEA report, 2021: https://www.eea.europa.eu/publications/maritime-transport).

'''This product has been archived''' For operationnal and online products, please visit https://marine.copernicus.eu '''DEFINITION''' Marine primary production corresponds to the amount of inorganic carbon which is converted into organic matter during the photosynthesis, and which feeds upper trophic layers. The daily primary production is estimated from satellite observations with the Antoine and Morel algorithm (1996). This algorithm modelized the potential growth in function of the light and temperature conditions, and with the chlorophyll concentration as a biomass index. The monthly area average is computed from monthly primary production weighted by the pixels size. The trend is computed from the deseasonalised time series (1998-2019), following the Vantrepotte and Mélin method. More details are provided in the Ocean State Reports 4 (Cossarini et al. ,2020). '''CONTEXT''' Marine primary production is at the basis of the marine food web and produce about 50% of the oxygen we breath every year (Behrenfeld et al., 2001). Study primary production is of paramount importance as ocean health and fisheries are directly linked to the primary production (Pauly and Christensen, 1995, Fee et al., 2019). Changes in primary production can have consequences on biogeochemical cycles, and specially on the carbon cycle, and impact the biological carbon pump intensity, and therefore climate (Chavez et al., 2011). Despite its importance for climate and socio-economics resources, primary production measurements are scarce and do not allow a deep investigation of the primary production evolution over decades. Satellites observations and modelling can fill this gap. However, depending of their parametrisation, models can predict an increase or a decrease in primary production by the end of the century (Laufkötter et al., 2015). Primary production from satellite observations present therefore the advantage to dispose an archive of more than two decades of global data. This archive can be assimilated in models, in addition to direct environmental analysis, to minimise models uncertainties (Gregg and Rousseaux, 2019). In the Ocean State Reports 4, primary production estimate from satellite and from modelling are compared at the scale of the Mediterranean Sea. This demonstrate the ability of such a comparison to deeply investigate physical and biogeochemical processes associated to the primary production evolution (Cossarini et al., 2020) '''CMEMS KEY FINDINGS''' The trend for the global ocean is negative over the period 1998-2019 with a decline in primary production of about 0.67 mgC.m-2.yr-1 or equivalently 0.2 %.yr-1. Note: The key findings will be updated annually in November, in line with OMI evolutions. '''DOI (product):''' https://doi.org/10.48670/moi-00225

This product displays the stations present in EMODnet validated dataset where DDT levels have been measured in water. EMODnet Chemistry has included the gathering of contaminants data since the beginning of the project in 2009. For the maps for EMODnet Chemistry Phase III, it was requested to plot data per matrix (water,sediment, biota), per biological entity and per chemical substance. The series of relevant map products have been developed according to the criteria D8C1 of the MSFD Directive, specifically focusing on the requirements under the new Commission Decision 2017/848 (17th May 2017). The Commission Decision points to relevant threshold values that are specified in the WFD, as well as relating how these contaminants should be expressed (units and matrix etc.) through the related Directives i.e. Priority substances for Water. EU EQS Directive does not fix any threshold values in sediments. On the contrary Regional Sea Conventions provide some of them, and these values have been taken into account for the development of the visualization products. To produce the maps the following process has been followed: 1. Data collection through SeaDataNet standards (CDI+ODV) 2. Harvesting, harmonization, validation and P01 code decomposition of data 3. SQL query on data sets from point 2 4. Production of map with each point representing at least one record that match the criteria The harmonization of all the data has been the most challenging task considering the heterogeneity of the data sources, sampling protocols. Preliminary processing were necessary to harmonize all the data : • For water: contaminants in the dissolved phase; • For sediment: data on total sediment (regardless of size class) or size class < 2000 μm • For biota: contaminant data will focus on molluscs, on fish (only in the muscle), and on crustaceans • Exclusion of data values equal to 0

'''This product has been archived''' For operationnal and online products, please visit https://marine.copernicus.eu '''DEFINITION''' Oligotrophic subtropical gyres are regions of the ocean with low levels of nutrients required for phytoplankton growth and low levels of surface chlorophyll-a whose concentration can be quantified through satellite observations. The gyre boundary has been defined using a threshold value of 0.15 mg m-3 chlorophyll for the Atlantic gyres (Aiken et al. 2016), and 0.07 mg m-3 for the Pacific gyres (Polovina et al. 2008). The area inside the gyres for each month is computed using monthly chlorophyll data from which the monthly climatology is subtracted to compute anomalies. A gap filling algorithm has been utilized to account for missing data. Trends in the area anomaly are then calculated for the entire study period (September 1997 to December 2020). '''CONTEXT''' Oligotrophic gyres of the oceans have been referred to as ocean deserts (Polovina et al. 2008). They are vast, covering approximately 50% of the Earth’s surface (Aiken et al. 2016). Despite low productivity, these regions contribute significantly to global productivity due to their immense size (McClain et al. 2004). Even modest changes in their size can have large impacts on a variety of global biogeochemical cycles and on trends in chlorophyll (Signorini et al. 2015). Based on satellite data, Polovina et al. (2008) showed that the areas of subtropical gyres were expanding. The Ocean State Report (Sathyendranath et al. 2018) showed that the trends had reversed in the Pacific for the time segment from January 2007 to December 2016. '''CMEMS KEY FINDINGS''' The trend in the North Atlantic gyre area for the 1997 Sept – 2020 December period was positive, with a 0.39% year-1 increase in area relative to 2000-01-01 values. This trend has decreased compared with the 1997-2019 trend of 0.45%, and is statistically significant (p<0.05). During the 1997 Sept – 2020 December period, the trend in chlorophyll concentration was positive (0.24% year-1) inside the North Atlantic gyre relative to 2000-01-01 values. This time series extension has resulted in a reversal in the rate of change, compared with the -0.18% trend for the 1997-209 period and is statistically significant (p<0.05). Note: The key findings will be updated annually in November, in line with OMI evolutions. '''DOI (product):''' https://doi.org/10.48670/moi-00226

'''This product has been archived'''                For operationnal and online products, please visit https://marine.copernicus.eu '''DEFINITION''' The ibi_omi_tempsal_sst_area_averaged_anomalies product for 2021 includes Sea Surface Temperature (SST) anomalies, given as monthly mean time series starting on 1993 and averaged over the Iberia-Biscay-Irish Seas. The IBI SST OMI is built from the CMEMS Reprocessed European North West Shelf Iberai-Biscay-Irish Seas (SST_MED_SST_L4_REP_OBSERVATIONS_010_026, see e.g. the OMI QUID, http://marine.copernicus.eu/documents/QUID/CMEMS-OMI-QUID-ATL-SST.pdf), which provided the SSTs used to compute the evolution of SST anomalies over the European North West Shelf Seas. This reprocessed product consists of daily (nighttime) interpolated 0.05° grid resolution SST maps over the European North West Shelf Iberai-Biscay-Irish Seas built from the ESA Climate Change Initiative (CCI) (Merchant et al., 2019) and Copernicus Climate Change Service (C3S) initiatives. Anomalies are computed against the 1993-2014 reference period. '''CONTEXT''' Sea surface temperature (SST) is a key climate variable since it deeply contributes in regulating climate and its variability (Deser et al., 2010). SST is then essential to monitor and characterise the state of the global climate system (GCOS 2010). Long-term SST variability, from interannual to (multi-)decadal timescales, provides insight into the slow variations/changes in SST, i.e. the temperature trend (e.g., Pezzulli et al., 2005). In addition, on shorter timescales, SST anomalies become an essential indicator for extreme events, as e.g. marine heatwaves (Hobday et al., 2018). '''CMEMS KEY FINDINGS''' The overall trend in the SST anomalies in this region is 0.011 ±0.001 °C/year over the period 1993-2021. '''DOI (product):''' https://doi.org/10.48670/moi-00256

This product displays the stations where fluoranthene has been measured in biota and the values present in EMODnet Chemistry infrastructure are not compliant with EQSD, i.e for the substance, in that station, quality values found in EMODnet validated dataset can be equal to 6 or Q and values are above the 30% of the value established by EQSD for fluoranthene in biota. It is necessary to take into account that LOD/LOQ can change with time. These products aggregate data by station, producing only one final value for each station. EMODnet Chemistry has included the gathering of contaminants data since the beginning of the project in 2009. For the maps for EMODnet Chemistry Phase III, it was requested to plot data per matrix (water,sediment, biota), per biological entity and per chemical substance. The series of relevant map products have been developed according to the criteria D8C1 of the MSFD Directive, specifically focusing on the requirements under the new Commission Decision 2017/848 (17th May 2017). The Commission Decision points to relevant threshold values that are specified in the WFD, as well as relating how these contaminants should be expressed (units and matrix etc.) through the related Directives i.e. Priority substances for Water. EU EQS Directive does not fix any threshold values in sediments. On the contrary Regional Sea Conventions provide some of them, and these values have been taken into account for the development of the visualization products. To produce the maps the following process has been followed: 1. Data collection through SeaDataNet standards (CDI+ODV) 2. Harvesting, harmonization, validation and P01 code decomposition of data 3. SQL query on data sets from point 2 4. Production of map with each point representing at least one record that match the criteria The harmonization of all the data has been the most challenging task considering the heterogeneity of the data sources, sampling protocols. Preliminary processing were necessary to harmonize all the data : • For water: contaminants in the dissolved phase; • For sediment: data on total sediment (regardless of size class) or size class < 2000 μm • For biota: contaminant data will focus on molluscs, on fish (only in the muscle), and on crustaceans • Exclusion of data values equal to 0

'''DEFINITION''' Oligotrophic subtropical gyres are regions of the ocean with low levels of nutrients required for phytoplankton growth and low levels of surface chlorophyll-a whose concentration can be quantified through satellite observations. The gyre boundary has been defined using a threshold value of 0.15 mg m-3 chlorophyll for the Atlantic gyres (Aiken et al. 2016), and 0.07 mg m-3 for the Pacific gyres (Polovina et al. 2008). The area inside the gyres for each month is computed using monthly chlorophyll data from which the monthly climatology is subtracted to compute anomalies. A gap filling algorithm has been utilized to account for missing data. Trends in the area anomaly are then calculated for the entire study period (September 1997 to December 2021). '''CONTEXT''' Oligotrophic gyres of the oceans have been referred to as ocean deserts (Polovina et al. 2008). They are vast, covering approximately 50% of the Earth’s surface (Aiken et al. 2016). Despite low productivity, these regions contribute significantly to global productivity due to their immense size (McClain et al. 2004). Even modest changes in their size can have large impacts on a variety of global biogeochemical cycles and on trends in chlorophyll (Signorini et al. 2015). Based on satellite data, Polovina et al. (2008) showed that the areas of subtropical gyres were expanding. The Ocean State Report (Sathyendranath et al. 2018) showed that the trends had reversed in the Pacific for the time segment from January 2007 to December 2016. '''CMEMS KEY FINDINGS''' The trend in the North Atlantic gyre area for the 1997 Sept – 2021 December period was positive, with a 0.14% year-1 increase in area relative to 2000-01-01 values. This trend has decreased compared with the 1997-2019 trend of 0.39%, and is no longer statistically significant (p>0.05). During the 1997 Sept – 2021 December period, the trend in chlorophyll concentration was negative (-0.21% year-1) inside the North Atlantic gyre relative to 2000-01-01 values. This is a slightly lower rate of change compared with the -0.24% trend for the 1997-2020 period but is still statistically significant (p<0.05). '''DOI (product):''' https://doi.org/10.48670/moi-00226

This product displays the stations where lead has been measured and the values present in EMODnet Chemistry infrastructure are always below the limit of detection or quantification (LOD/LOQ), i.e quality values found in EMODnet validated dataset can be equal to 6 or Q. It is necessary to take into account that LOD/LOQ can change with time. These products aggregate data by station, producing only one final value for each station (above, below or above/below). EMODnet Chemistry has included the gathering of contaminants data since the beginning of the project in 2009. For the maps for EMODnet Chemistry Phase III, it was requested to plot data per matrix (water,sediment, biota), per biological entity and per chemical substance. The series of relevant map products have been developed according to the criteria D8C1 of the MSFD Directive, specifically focusing on the requirements under the new Commission Decision 2017/848 (17th May 2017). The Commission Decision points to relevant threshold values that are specified in the WFD, as well as relating how these contaminants should be expressed (units and matrix etc.) through the related Directives i.e. Priority substances for Water. EU EQS Directive does not fix any threshold values in sediments. On the contrary Regional Sea Conventions provide some of them, and these values have been taken into account for the development of the visualization products. To produce the maps the following process has been followed: 1. Data collection through SeaDataNet standards (CDI+ODV) 2. Harvesting, harmonization, validation and P01 code decomposition of data 3. SQL query on data sets from point 2 4. Production of map with each point representing at least one record that match the criteria The harmonization of all the data has been the most challenging task considering the heterogeneity of the data sources, sampling protocols. Preliminary processing were necessary to harmonize all the data : • For water: contaminants in the dissolved phase; • For sediment: data on total sediment (regardless of size class) or size class < 2000 μm • For biota: contaminant data will focus on molluscs, on fish (only in the muscle), and on crustaceans • Exclusion of data values equal to 0

This study aims to compare different metabarcoding sequences of commercially fished shrimps collected by tree counties on the North Brazil Shelf Large Marine Ecosystem