2021
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'''Short description:''' The High-Resolution Ocean Colour (HR-OC) Consortium (Brockmann Consult, Royal Belgian Institute of Natural Sciences, Flemish Institute for Technological Research) distributes Remote Sensing Reflectances (RRS, expressed in sr-1), Turbidity (TUR, expressed in FNU), Solid Particulate Matter Concentration (SPM, expressed in mg/l), spectral particulate backscattering (BBP, expressed in m-1) and chlorophyll-a concentration (CHL, expressed in µg/l) for the Sentinel 2/MSI sensor at 100m resolution for a 20km coastal zone. RRS and BBP are delivered at nominal central bands of 443, 492, 560, 665, 704, 740, 783, 865 nm. The primary variable from which it is virtually possible to derive all the geophysical and transparency products is the spectral RRS. This, together with the spectral BBP, constitute the category of the 'optics' products. The spectral BBP product is generated from the RRS products using a quasi-analytical algorithm (Lee et al. 2002). The 'tur_tsm_chl' products include TUR, SPM and CHL). They are retrieved through the application of automated switching algorithms to the RRS spectra adapted to varying water conditions (Novoa et al. 2017). The GEOPHYSICAL product consists of the Chlorophyll-a concentration (CHL) retrieved via a multi-algorithm approach with optimized quality flagging (O'Reilly et al. 2019, Gons et al. 2005, Lavigne et al. 2021). The NRT products are generally provided withing 24 hours up to 3 days after end of the day. The RRS product is accompanied by a relative uncertainty estimate (unitless) derived by direct comparison of the products to corresponding fiducial reference measurements provided through the AERONET-OC network. '''Processing information:''' The HR-OC processing system is deployed on Creodias where Sentinel 2/MSI L1C data are available. The production control element is being hosted within the infrastructure of Brockmann Consult. The processing chain consists of: * Resampling to 60m and mosaic generation of the set of Sentinel-2 MSI L1C granules of a single overpass that cover a single UTM zone. * Application of a glint correction taking into account the detector viewing angles * Application of a coastal mask with 20km water + 20km land. The result is a L1C mosaic tile with data just in the coastal area optimized for compression. * Level 2 processing with pixel identification (IdePix), atmospheric correction (C2RCC and ACOLITE or iCOR), in-water processing and merging (HR-OC L2W processor). The result is a 60m product with the same extent as the L1C mosaic, with variables for optics, transparency, and geophysics, and with data filled in the water part of the coastal area. * invalid pixel identification takes into account corrupted (L1) pixels, clouds, cloud shadow, glint, dry-fallen intertidal flats, coastal mixed-pixels, sea ice, melting ice, floating vegetation, non-water objects, and bottom reflection. * Daily L3 aggregation merges all Level 2 mosaics of a day intersecting with a target tile. All valid water pixels are included in the 20km coastal stripes; all other values are set to NaN. There may be more than a single overpass a day, in particular in the northern regions. The main contribution usually is the mosaic of the zone, but also adjacent mosaics may overlap. This step comprises resampling to the 100m target grid. * Monthly L4 aggregation combines all Level 3 products of a month. The output is a set of 32 NetCDF datasets for (1) optics and (2) transparency, suspended matter and chlorophyll concentration respectively per month. * Gap filling combines all daily products of a period and generates (partially) gap-filled daily products again. The output of gap filling are 32 datasets for optics (BBP443 only), and (2) transparency, suspended matter and chlorophyll concentration and geophysics per day. '''Description of observation methods/instruments:''' Ocean colour technique exploits the emerging electromagnetic radiation from the sea surface in different wavelengths. The spectral variability of this signal defines the so-called ocean colour which is affected by the presence of phytoplankton. '''Quality / Accuracy / Calibration information:''' A detailed description of the calibration and validation activities performed over this product can be found on the CMEMS web portal and in CMEMS-BGP_HR-QUID-009-201to212. '''Suitability, Expected type of users / uses:''' This product is meant for use for educational purposes and for the managing of the marine safety, marine resources, marine and coastal environment and for climate and seasonal studies. '''Dataset names: ''' *cmems_obs_oc_med_bgc_tur-spm-chl_nrt_l3-hr-mosaic_P1D-m *cmems_obs_oc_med_bgc_optics_nrt_l3-hr-mosaic_P1D-v01 '''Files format:''' *netCDF-4, CF-1.7 *INSPIRE compliant." '''DOI (product) :''' https://doi.org/10.48670/moi-00109
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NOAA STAR produces two lines of gridded 0.02deg super-collated L3S LEO datasets from Low Earth Orbiting (LEO) satellites, one from the NOAA afternoon JPSS (L3S_LEO_PM) and the other from the EUMETSAT mid-morning Metop-FG (L3S_LEO_AM). The L3S_LEO_PM is derived from JPSS satellites (in v2.80, NPP and N20) with VIIRS sensor onboard (0.75km/nadir). The L3S_LEO_PM dataset is produced by aggregating L3U datasets from two JPSS satellites ( https://doi.org/10.5067/GHVRS-3UO28 and https://doi.org/10.5067/GHV20-3UO28 ) and covers from Feb 2012-present. The L3S-LEO-PM data are reported in two files per 24hr interval, one daytime and one nighttime (nominal JPSS local equator crossing times around 01:30/13:30). Data is in NetCDF4 format, compliant with the GHRSST Data Specification version 2 (GDS2). The Near-Real Time (NRT) L3S-LEO data are archived at PO.DAAC with approximately 6 hours latency and then replaced by the Delayed Mode files about 2 months later, with identical file names. In addition to SST, the L3S-LEO files report the location and intensity of thermal fronts. The NRT/DM data are seamlessly stitched with the full-mission Reanalysis (RAN). The ACSPO L3S products are monitored and validated against in situ data in the NOAA iQuam system ( https://www.star.nesdis.noaa.gov/socd/sst/iquam ) in the NOAA SQUAM system ( https://www.star.nesdis.noaa.gov/socd/sst/squam ). Quality of SST imagery, clear-sky mask and thermal fronts is evaluated in the NOAA ARMS system ( https://www.star.nesdis.noaa.gov/socd/sst/arms ). NOAA plans to include data from other afternoon platforms and sensors, such as N21 and Aqua MODIS, into the future releases of the L3S_LEO_PM.
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This map presents all layers corresponding to "Marine fishing" activities in the Atlantic area. For more information about this NACE code : https://ec.europa.eu/eurostat/ramon/nomenclatures/index.cfm?TargetUrl=DSP_NOM_DTL_VIEW&StrNom=NACE_REV2&StrLanguageCode=EN&IntPcKey=18495674&IntKey=18495704&StrLayoutCode=HIERARCHIC&IntCurrentPage=1 Indicators collected are : Business indicators per country Number of persons employed on Atlantic pits and rigs Overall gas volume produced Overall volume produced from Atlantic gas terminals
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This map presents all layers corresponding to "Construction of utility projects for fluids" activities in the Atlantic area. For more information about this NACE code : https://ec.europa.eu/eurostat/ramon/nomenclatures/index.cfm?TargetUrl=DSP_NOM_DTL_VIEW&StrNom=NACE_REV2&StrLanguageCode=EN&IntPcKey=18508154&IntKey=18508184&StrLayoutCode=HIERARCHIC&IntCurrentPage=1 Indicators collected are : Number of persons employed in cable and pipe laying and maintenance activities in the Atlantic area per country Submarine pipe length in Atlantic Area per country (P16) Number of landing points in Atlantic Area per country
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This visualization product displays the density of seafloor litter per trawl. EMODnet Chemistry included the collection of marine litter in its 3rd phase. Since the beginning of 2018, data of seafloor litter collected by international fish-trawl surveys have been gathered and processed in the EMODnet Chemistry Marine Litter Database (MLDB). The harmonization of all the data has been the most challenging task considering the heterogeneity of the data sources, sampling protocols (OSPAR and MEDITS protocols) and reference lists used on a European scale. Moreover, within the same protocol, different gear types are deployed during fishing bottom trawl surveys. In cases where the wingspread and/or number of items were unknown, data could not be used because these fields are needed to calculate the density. Data collected before 2011 are affected by this filter. When the distance reported in the data was null, it was calculated from: - the ground speed and the haul duration using this formula: Distance (km) = Haul duration (h) * Ground speed (km/h); - the trawl coordinates if the ground speed and the haul duration were not filled in. The swept area is calculated from the wingspread (which depends on the fishing gear type) and the distance trawled: Swept area (km²) = Distance (km) * Wingspread (km) Densities have been calculated on each trawl and year using the following computation: Density (number of items per km²) = ∑Number of items / Swept area (km²) Percentiles 50, 75, 95 & 99 have been calculated taking into account data for all years. More information on data processing and calculation are detailed in the document attached. Warning: the absence of data on the map doesn't necessarily mean that they don't exist, but that no information has been entered in the Marine Litter Database for this area.
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EMODnet Chemistry aims to provide access to marine chemistry data sets and derived data products concerning eutrophication, acidity and contaminants. The chemicals chosen reflect importance to the Marine Strategy Framework Directive (MSFD). ITS-90 water temperature and Water body salinity variables have been also included (as-is) to complete the Eutrophication and Acidity data. If you use these variables for calculations, please refer to SeaDataNet for having the quality flags: https://www.seadatanet.org/Products/Aggregated-datasets. This aggregated dataset contains all unrestricted EMODnet Chemistry data on Eutrophication and Acidity (18 parameters with quality flag indicators), and covers the Northeast Atlantic Ocean (40W) with 381639 CDI records (381085 Vertical profiles and 554 Time series). Vertical profiles temporal range is from 1921-10-15 to 2020-10-16. Time series temporal range is from 1974-06-14 to 2019-04-24. Data were aggregated and quality controlled by 'IFREMER / IDM / SISMER - Scientific Information Systems for the SEA' from France. Regional datasets concerning eutrophication and acidity are automatically harvested and resulting collections are aggregated and quality controlled using ODV Software and following a common methodology for all Sea Regions ( https://doi.org/10.6092/9f75ad8a-ca32-4a72-bf69-167119b2cc12). When not present in original data, Water body nitrate plus nitrite was calculated by summing up the Nitrates and Nitrites. Same procedure was applied for Water body dissolved inorganic nitrogen (DIN) which was calculated by summing up the Nitrates, Nitrites and Ammonium. Parameter names are based on P35, EMODnet Chemistry aggregated parameter names vocabulary, which is available at: https://www.bodc.ac.uk/resources/vocabularies/vocabulary_search/P35/. Detailed documentation is available at: https://dx.doi.org/10.6092/4e85717a-a2c9-454d-ba0d-30b89f742713 Explore and extract data at: https://emodnet-chemistry.webodv.awi.de/eutrophication%3EAtlantic The aggregated dataset can also be downloaded as ODV collection and spreadsheet, which is composed of metadata header followed by tab separated values. This spreadsheet can be imported to ODV Software for visualisation (More information can be found at: https://www.seadatanet.org/Software/ODV ). The original datasets can be searched and downloaded from EMODnet Chemistry Chemistry CDI Data and Discovery Access Service: https://emodnet-chemistry.maris.nl/search
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This map presents all layers corresponding to "Retail sale of fish, crustaceans and molluscs in specialised stores" activities in the Atlantic area. For more information about this NACE code : https://ec.europa.eu/eurostat/ramon/nomenclatures/index.cfm?TargetUrl=DSP_NOM_DTL_VIEW&StrNom=NACE_REV2&StrLanguageCode=EN&IntPcKey=18511064&IntKey=18511154&StrLayoutCode=HIERARCHIC&IntCurrentPage=1 Indicators collected are : Business indicators per country
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The West Gironde Mud Patch (WGMP) is a 420-km2 mud belt in the Bay of Biscay, located 25 km off the mouth of the Gironde estuary. This clay-silt feature of 4 m in thickness extends between 30 and 75m water depth, surrounded by the sands and gravels that cover the North Aquitaine continental shelf. Interface cores were collected during JERICOBent-1 cruise (October 2016; Deflandre (2016) doi.org/10.17600/16010400) along two cross-shelf transects for a total of 9 sites. Each sediment core was carefully extruded every 0.5 cm from the top core to 4 cm and every 1 cm below until the core bottom. The sediment layers were used to determine dry bulk density, grain size and selected radioisotope activities (210Pb, 226Ra, 137Cs, 228Th, K).
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This visualization product displays the cigarette related items abundance of marine macro-litter (> 2.5cm) per beach per year from Marine Strategy Framework Directive (MSFD) monitoring surveys without UNEP-MARLIN data. EMODnet Chemistry included the collection of marine litter in its 3rd phase. Since the beginning of 2018, data of beach litter have been gathered and processed in the EMODnet Chemistry Marine Litter Database (MLDB). The harmonization of all the data has been the most challenging task considering the heterogeneity of the data sources, sampling protocols and reference lists used on a European scale. Preliminary processing were necessary to harmonize all the data: - Exclusion of OSPAR 1000 protocol: in order to follow the approach of OSPAR that it is not including these data anymore in the monitoring; - Selection of MSFD surveys only (exclusion of other monitoring, cleaning and research operations); - Exclusion of beaches without coordinates; - Selection of cigarette related items only. The list of selected items is attached to this metadata. This list was created using EU Marine Beach Litter Baselines and EU Threshold Value for Macro Litter on Coastlines from JRC (these two documents are attached to this metadata); - Exclusion of surveys referring to the UNEP-MARLIN list: the UNEP-MARLIN protocol differs from the other types of monitoring in that cigarette butts are surveyed in a 10m square. To avoid comparing abundances from very different protocols, the choice has been made to distinguish in two maps the cigarette related items results associated with the UNEP-MARLIN list from the others; - Normalization of survey lengths to 100m & 1 survey / year: in some case, the survey length was not exactly 100m, so in order to be able to compare the abundance of litter from different beaches a normalization is applied using this formula: Number of cigarette related items of the survey (normalized by 100 m) = Number of cigarette related items of the survey x (100 / survey length) Then, this normalized number of cigarette related items is summed to obtain the total normalized number of cigarette related items for each survey. Finally, the median abundance of cigarette related items for each beach and year is calculated from these normalized abundances of cigarette related items per survey. Sometimes the survey length was null or equal to 0. Assuming that the MSFD protocol has been applied, the length has been set at 100m in these cases. Percentiles 50, 75, 95 & 99 have been calculated taking into account cigarette related items from MSFD monitoring data (excluding UNEP-MARLIN protocol) for all years. More information is available in the attached documents. Warning: the absence of data on the map doesn't necessarily mean that they don't exist, but that no information has been entered in the Marine Litter Database for this area.
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Understanding the spatial and temporal preferences of toxic phytoplankton species is of paramount importance in managing and predicting harmful events in aquatic ecosystems. In this study we address the realised niche of the species Alexandrium minutum, Pseudo-nitzschia fraudulenta and P. australis. We used them to highlight distribution patterns at different scales and determine possible drivers. To achieve this, we have developed original procedures coupling niche theory and habitat suitability modelling using abundance data in four consecutive steps: 1) Estimate the realised niche applying kernel functions. 2) Assess differences between the species’ niche as a whole and at the local level. 3) Develop habitat and temporal suitability models using niche overlap procedures. 4) Explore species temporal and spatial distributions to highlight possible drivers. Data used are species abundance and environmental variables collected over 27 years (1988-2014) and include 139 coastal water sampling sites along the French Atlantic coast. Results show that A. minutum and P. australis niches are very different, although both species have preference for warmer months. They both respond to decadal summer NAO but in the opposite way. P. fraudulenta realised niche lies in between the two other species niches. It also prefers warmer months but does not respond to decadal summer NAO. The Brittany peninsula is now classified as an area of prevalence for the three species. The methodology used here will allow to anticipate species distribution in the event of future environmental challenges resulting from climate change scenarios.
Catalogue PIGMA