Web Map Service for Emodnet Chemistry

'''DEFINITION''' Significant wave height (SWH), expressed in metres, is the average height of the highest third of waves. This OMI provides global maps of the seasonal mean and trend of significant wave height (SWH), as well as time series in three oceanic regions of the same variables and their trends from 2002 to 2020, calculated from the reprocessed global L4 SWH product (WAVE_GLO_PHY_SWH_L4_MY_014_007). The extreme SWH is defined as the 95th percentile of the daily maximum SWH for the selected period and region. The 95th percentile is the value below which 95% of the data points fall, indicating higher than normal wave heights. The mean and 95th percentile of SWH (in m) are calculated for two seasons of the year to take into account the seasonal variability of waves (January, February and March, and July, August and September). Trends have been obtained using linear regression and are expressed in cm/yr. For the time series, the uncertainty around the trend was obtained from the linear regression, while the uncertainty around the mean and 95th percentile was bootstrapped. For the maps, if the p-value obtained from the linear regression is less than 0.05, the trend is considered significant. '''CONTEXT''' Grasping the nature of global ocean surface waves, their variability, and their long-term interannual shifts is essential for climate research and diverse oceanic and coastal applications. The sixth IPCC Assessment Report underscores the significant role waves play in extreme sea level events (Mentaschi et al., 2017), flooding (Storlazzi et al., 2018), and coastal erosion (Barnard et al., 2017). Additionally, waves impact ocean circulation and mediate interactions between air and sea (Donelan et al., 1997) as well as sea-ice interactions (Thomas et al., 2019). Studying these long-term and interannual changes demands precise time series data spanning several decades. Until now, such records have been available only from global model reanalyses or localised in situ observations. While buoy data are valuable, they offer limited local insights and are especially scarce in the southern hemisphere. In contrast, altimeters deliver global, high-quality measurements of significant wave heights (SWH) (Gommenginger et al., 2002). The growing satellite record of SWH now facilitates more extensive global and long-term analyses. By using SWH data from a multi-mission altimetric product from 2002 to 2020, we can calculate global mean SWH and extreme SWH and evaluate their trends, regionally and globally. '''KEY FINDINGS''' From 2002 to 2020, positive trends in both Significant Wave Height (SWH) and extreme SWH are mostly found in the southern hemisphere (a, b). The 95th percentile of wave heights (q95), increases faster than the average values, indicating that extreme waves are growing more rapidly than average wave height (a, b). Extreme SWH’s global maps highlight heavily storms affected regions, including the western North Pacific, the North Atlantic and the eastern tropical Pacific (a). In the North Atlantic, SWH has increased in summertime (July August September) but decreased in winter. Specifically, the 95th percentile SWH trend is decreasing by 2.1 ± 3.3 cm/year, while the mean SWH shows a decrease of 2.2 ± 1.76 cm/year. In the south of Australia, during boreal winter, the 95th percentile SWH is increasing at 2.6 ± 1.5 cm/year (c), with the mean SWH increasing by 0.5 ± 0.66 cm/year (d). Finally, in the Antarctic Circumpolar Current, also in boreal winter, the 95th percentile SWH trend is 3.2 ± 2.14 cm/year (c) and the mean SWH trend is 1.7 ± 0.84 cm/year (d). These patterns highlight the complex and region-specific nature of wave height trends. Further discussion is available in A. Laloue et al. (2024). '''DOI (product):''' https://doi.org/10.48670/mds-00352

WMS/WFS services for marine chemical datasets used in EMODNet Chemistry and provided by SeaDataNet. The data distribution is managed by the Common Data Index (CDI) Data Discovery and Access service

Serveur wms public de l'Ifremer, Accès aux données du Sismer

This visualization product displays plastic bags density per trawl. EMODnet Chemistry included the collection of marine litter in its 3rd phase. Since the beginning of 2018, data of seafloor litter collected by international fish-trawl surveys have been gathered and processed in the EMODnet Chemistry Marine Litter Database (MLDB). The harmonization of all the data has been the most challenging task considering the heterogeneity of the data sources, sampling protocols (OSPAR and MEDITS protocols) and reference lists used on a European scale. Moreover, within the same protocol, different gear types are deployed during bottom trawl surveys. In cases where the wingspread and/or number of items were/was unknown, it was not possible to use the data because these fields are needed to calculate the density. Data collected before 2011 are concerned by this filter. When the distance reported in the data was null, it was calculated from: - the ground speed and the haul duration using the following formula: Distance (km) = Haul duration (h) * Ground speed (km/h); - the trawl coordinates if the ground speed and the haul duration were not filled in. The swept area was calculated from the wingspread (which depends on the fishing gear type) and the distance trawled: Swept area (km²) = Distance (km) * Wingspread (km) Densities were calculated on each trawl and year using the following computation: Density of plastic bags (number of items per km²) = ∑Number of plastic bags related items / Swept area (km²) Percentiles 50, 75, 95 & 99 were calculated taking into account data for all years. The list of selected items for this product is attached to this metadata. Information on data processing and calculation is detailed in the attached methodology document. Warning: the absence of data on the map does not necessarily mean that they do not exist, but that no information has been entered in the Marine Litter Database for this area.

This visualization product displays the fishing & aquaculture related plastic items abundance of marine macro-litter (> 2.5cm) per beach per year from Marine Strategy Framework Directive (MSFD) monitoring surveys. EMODnet Chemistry included the collection of marine litter in its 3rd phase. Since the beginning of 2018, data of beach litter have been gathered and processed in the EMODnet Chemistry Marine Litter Database (MLDB). The harmonization of all the data has been the most challenging task considering the heterogeneity of the data sources, sampling protocols and reference lists used on a European scale. Preliminary processings were necessary to harmonize all the data: - Exclusion of OSPAR 1000 protocol: in order to follow the approach of OSPAR that it is not including these data anymore in the monitoring; - Selection of MSFD surveys only (exclusion of other monitoring, cleaning and research operations); - Exclusion of beaches without coordinates; - Selection of plastic bags related items only. The list of selected items is attached to this metadata. This list was created using EU Marine Beach Litter Baselines, the European Threshold Value for Macro Litter on Coastlines and the Joint list of litter categories for marine macro-litter monitoring from JRC (these three documents are attached to this metadata); - Normalization of survey lengths to 100m & 1 survey / year: in some case, the survey length was not exactly 100m, so in order to be able to compare the abundance of litter from different beaches a normalization is applied using this formula: Number of plastic bags related items of the survey (normalized by 100 m) = Number of plastic bags related items of the survey x (100 / survey length) Then, this normalized number of plastic bags related items is summed to obtain the total normalized number of plastic bags related items for each survey. Finally, the median abundance of plastic bags related items for each beach and year is calculated from these normalized abundances of plastic bags related items per survey. Sometimes the survey length was null or equal to 0. Assuming that the MSFD protocol has been applied, the length has been set at 100m in these cases. Percentiles 50, 75, 95 & 99 have been calculated taking into account plastic bags related items from MSFD data for all years. More information is available in the attached documents. Warning: the absence of data on the map does not necessarily mean that they do not exist, but that no information has been entered in the Marine Litter Database for this area.

This visualization product displays the spatial distribution of the sampling effort (based on the start position of the sampling tow) over the six-years' period 2017-2022 from other specific protocols. EMODnet Chemistry included the collection of marine litter in its 3rd phase. Before 2021, there was no coordinated effort at the regional or European scale for micro-litter. Given this situation, EMODnet Chemistry proposed to adopt the data gathering and data management approach as generally applied for marine data, i.e., populating metadata and data in the CDI Data Discovery and Access service using dedicated SeaDataNet data transport formats. EMODnet Chemistry is currently the official EU collector of micro-litter data from Marine Strategy Framework Directive (MSFD) National Monitoring activities (descriptor 10). A series of specific standard vocabularies or standard terms related to micro-litter have been added to SeaDataNet NVS (NERC Vocabulary Server) Common Vocabularies to describe the micro-litter. European micro-litter data are collected by the National Oceanographic Data Centres (NODCs). Micro-litter map products are generated from NODCs data after a test of the aggregated collection including data and data format checks and data harmonization. A filter is applied to represent only micro-litter samplings carried out according to a very specific protocol such as the Volvo Ocean Race (VOR) or Oceaneye. The spatial distribution was then determined by calculating the number of times each cell was sampled during the period 2017-2022, only taking into account the start position of the tows. The corresponding total distance (kms) sampled in each cell is also provided in the attribute table. Information on data processing and calculation are detailed in the attached methodology document. Warning: the absence of data on the map does not necessarily mean that they do not exist, but that no information has been entered in the National Oceanographic Data Centre (NODC) for this area. This work is based on the work presented in the following scientific article: O. Gerigny, M. Brun, M.C. Fabri, C. Tomasino, M. Le Moigne, A. Jadaud, F. Galgani, Seafloor litter from the continental shelf and canyons in French Mediterranean Water: Distribution, typologies and trends, Marine Pollution Bulletin, Volume 146, 2019, Pages 653-666, ISSN 0025-326X, https://doi.org/10.1016/j.marpolbul.2019.07.030.

Based on the consolidation of the Ifremer networks RESCO (https://doi.org/10.17882/53007) and VELYGER (https://doi.org/10.17882/41888), the general objective of the ECOSCOPA project is to analyze the causes of spatio-temporal variability of the main life traits (Larval stage - Recruitment - Reproduction - Growth – Survival – Cytogenetic anomalies) of the Pacific oyster in France and follow their evolution over the long term in the context of climate change. The high frequency environmental data are monitored since 2010 at several stations next to oyster farm areas in eight bays of the French coast (from south to north): Thau Lagoon and bays of Arcachon, Marennes Oléron, Bourgneuf, Vilaine, Brest, Mont Saint-Michel and Veys (see map below). Sea temperature and practical salinity are recorded at 15-mins frequency. For several sites, fluorescence and turbidity data are also available. Data are acquired with automatic probes directly put in oyster bags or fixed on metallic structure at 50 cm over the sediment bottom, except for Thau Lagoon whose probes are deployed at 2m below sea surface. Since 2010, several types of probes were used: STP2, STPS, SMATCH or WiSens CTD from NKE (www.nke-instrumentation.fr) and recently ECO FLNTU (www.seabird.com). The probes are regularly qualified by calibrations in the Ifremer coastal laboratories. Precision estimated of the complete data collection process is: temperature (±0.1°C), salinity (±0.5psu), in vivo fluorescence (±10%), turbidity (±10%). The data are qualified into several levels: 0-No Quality Check performed, 1-Good data, 2-Probably good data, 3-Probably bad data, 4-Bad data, 5-Value changed, 7-Nominal value, 8-Interpolated value, 9-Missing value. 

This dataset comprises two netcdf files. The first file contains the six global two-dimensional maps necessary to implement the tidal mixing parameterization presented in de Lavergne et al. (2020). Four power fields (E_wwi, E_sho, E_cri and E_hil) represent depth-integrated internal tide energy dissipation, with units of Watts per square meter. Each power field corresponds to a specific dissipative process and associated vertical structure of turbulence production. The two remaining fields, H_cri and H_bot, are decay heights (with units of meters) that enter the vertical structures of the E_cri and E_hil components, respectively. The second file contains three-dimensional fields of turbulence production (with units of Watts per kilogram) obtained by application of the parameterization to the WOCE global hydrographic climatology. The file includes the total turbulence production (epsilon_tid), its four components (epsilon_wwi, epsilon_sho, epsilon_cri, epsilon_hil), and the underlying hydrographic fields, as a function of longitude, latitude and depth. All maps have a horizontal resolution of 0.5º. Detailed documentation of the parameterization can be found in the following publication: de Lavergne, C., Vic, C., Madec, G., Roquet, F., Waterhouse, A.F., Whalen, C.B., Cuypers, Y., Bouruet-Aubertot, P., Ferron, B., Hibiya, T. A parameterization of local and remote tidal mixing. Journal of Advances in Modeling Earth Systems, 12, e2020MS002065 (2020). https://doi.org/10.1029/2020MS002065