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This database contains hauls collated from 1965 to 2019, from fisheries dependent and independent data, from across eastern Atlantic waters and French Mediterranean waters. From this data diadromous fish spatio-temporal data was cleaned and standardised.
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Data collected by the Spindrift 2 Sails of Change vessel during its attempt at the round-the-world sailing record, the Jules Verne Trophy. More information at https://spindrift-racing.com/fr/.
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In October 2019 we chose 15 sites from the 2019 EVHOE survey for environmental DNA (eDNA) sampling. The French international EVHOE bottom trawl survey is carried out annually during autumn in the BoB to monitor demersal fish resources. At each site, we sampled seawater using Niskin bottles deployed with a circular rosette. There were nine bottles on the rosette, each of them able to hold ∼5 l of water. At each site, we first cleaned the circular rosette and bottles with freshwater, then lowered the rosette (with bottles open) to 5 m above the sea bottom, and finally closed the bottles remotely from the boat. The 45 l of sampled water was transferred to four disposable and sterilized plastic bags of 11.25 l each to perform the filtration on-board in a laboratory dedicated to the processing of eDNA samples. To speed up the filtration process, we used two identical filtration devices, each composed of an Athena® peristaltic pump (Proactive Environmental Products LLC, Bradenton, Florida, USA; nominal flow of 1.0 l min–1 ), a VigiDNA 0.20 μm filtration capsule (SPYGEN, le Bourget du Lac, France), and disposable sterile tubing. Each filtration device filtered the water contained in two plastic bags (22.5 l), which represent two replicates per sampling site. We followed a rigorous protocol to avoid contamination during fieldwork, using disposable gloves and single-use filtration equipment and plastic bags to process each water sample. At the end of each filtration, we emptied the water inside the capsule that we replaced by 80 ml of CL1 conservation buffer and stored the samples at room temperature following the specifications of the manufacturer (SPYGEN, Le Bourget du Lac, France). We processed the eDNA capsules at SPYGEN, following the protocol proposed by Polanco-Fernández et al., (2020). Half of the extracted DNA was processed by Sinsoma using newly developped ddPCR assays for European seabass (Dicentrachus labrax), European hake (Merluccius merluccius) and blackspot seabream (Pagellus bogaraveo). The other half of the extracted DNA was analysed using metabarcoding with teleo primer. The raw metabarcoding data set is available at https://www.doi.org/10.16904/envidat.442 Bottom trawling using a GOV trawl was carried out before or after water sampling. The catch was sorted by species and catches in numbers and weight were recorded. No blackspot seabream individuals were caught. Data content: * ddPCR/: contains the ddPCR counts and DNA concentrations for each sample and species. * SampleInfo/: contains the filter volume for each eDNA sample. * StationInfo/: contains metadata related to the data collected in the field for each filter. * Metabarcoding/: contains metabarcoding results for teleoprimer. * Trawldata/: contains catch data in numbers and weight (kg).
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Aires géographiques des appellations d'origine contrôlées (AOC)/protégées (AOP). Le fichier liste pour chaque commune, identifiée par son département, son nom et son code INSEE, les aires géographiques des appellations AOC/AOP qui se situent sur la commune
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The SAPERCHAIS program (Suivi des Apports marins et terrigènes dans la mer des PERtuis CHarentAIS) was developed to monitor environmental fluctuations in the Pertuis Charentais Sea by an hydrological watchfulness. Seven stations, representatives of terrigenous or marine inputs, have been followed from 2011 to 2014. From north to south, the main four rivers of the Pertuis, Le Lay, La Sèvre, Charente and Seudre, and the three maritime inputs of each strait, Breton, Antioche and Maumusson. At each station, temperature and salinity were recorded in situ, just below the surface, with a high frequency resolution (10 minutes) . This work was supported by grants from Région Poitou-Charentes and European Regional Development Fund to the Ifremer "Developpement Durable de la Pêche et de la Conchyliculture" project.
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The West Gironde Mud Patch (WGMP) is a mud deposit located 25 km from the mouth of the Gironde Estuary in the Bay of Biscay. This 4-metre-thick clay-silt feature, which extends over an area of 420 km2, is found at depths between 30 and 80 meters. The main objectives of the JERICObent7 cruise, in July 2019, were to characterise the evolution of the WGMP’s benthic ecosystem in terms of its sedimentary, biogeochemical and ecological properties and to reconstruct climate variations and identify potential anthropogenic impacts over the last few centuries. To this end, a precise chronological framework was established for the sedimentary archives of the last few decades using 210Pbxs (T1/2 = 22.3 years). Interface cores were collected at stations 1, 3 and 4 along a cross-shelf transect. Twin Kullenberg cores were collected at sites 3 and 4 for geochemical (KGL) and palaeoceanographic (JB7-ST) investigations. Each interface core was carefully extruded at 0.5 cm intervals from the top of the core to 4 cm, and then at 1 cm intervals until the bottom was reached. Kullenberg cores were only collected at sites 3 and 4. Depending on their intended use, the Kullenberg cores were sampled at different resolutions, the depth of each sediment layer corresponded to the depth from the top of the core. These layers were then used to determine the dry bulk density and radioisotope activities of interest (210Pb, 226Ra, 228Th, 137Cs, 40K). Excess 210Pb was used to establish the realignment and chronological framework of the interface and Kullenberg cores.
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This folder contains two examples of PAGURE datasets, corresponding to three surveys: -CGFS conducted in 2018 in the English Channel (Northeast Atlantic) -EPIBENGOL conducted in 2019 in the Gulf of Lion (Western Mediterranean) -EVHOE conducted in 2020 in the Bay of Biscay and Celtic Shelf (Northeast Atlantic) Files include metadata for the sampling stations, annotation files. A readme tex file contains the links to the voyage metadata This folder is aimed at providing an example of documented underwater imagery dataset. These data are part of the data exchange conducted in the QuatreA collaboration between the French Research Institute for the Exploitation of the Sea (Ifremer), the Commonwealth Scientific and Industrial Research Organisation (CSIRO), and the University of Tasmania (UTAS).
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Global Fishing Watch is working across the globe to provide governments and authorities with actionable reports and capacity building to help strengthen fisheries monitoring and compliance. Our global team of experts produce analyses to inform monitoring, control and surveillance of fisheries in five key areas: - Illegal, unreported and unregulated fishing - Transshipment - Port controls - Marine protected areas - Operation support Collaboration and information sharing are integral to achieving well-managed fisheries. By working with stakeholders and making analyses available to national, regional and intergovernmental partners, Global Fishing Watch is enabling fisheries agencies to make more informed and cost-efficient decisions. Topics: - Commercial fishing, Global Fishing Watch is harnessing innovative technology to turn transparent data into actionable information and drive tangible change in the way that fisheries are governed. - Transshipment, Through publicly sharing map visualisations and creating data and analysis tools, we seek to inform management and policy efforts and provide a more complete picture of transshipment at sea. - Marine protected areas, Global Fishing Watch is harnessing the data and technology revolution to support the effective design, management and monitoring of marine protected areas.
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The PHYTOBS-MARCOBOLO dataset comprises long-term time series on marine microphytoplankton, from 2003 to 2021, along the entire French metropolitan coastline. Microphytoplankton data cover microscopic taxonomic identifications and counts. The PHYTOBS-MARCOBOLO dataset corresponds to a dataset extracted from the PHYTOBS network (DOI:10.17882/85178). The PHYTOBS network provides the scientific community and stakeholders with validated and qualified data on the biomass, abundance and composition of marine microphytoplankton in coastal and lagoon waters, with the aim of supporting scientific research. PHYTOBS-MARCOBOLO is a dataset used as part of the Horizon Europe MARCO-BOLO project (https://marcobolo-project.eu/), in which we are currently working to understand and analyze multi-decadal trends in coastal and marine biodiversity on a European scale. The PHYTOBS-MARCOBOLO dataset gathers data from 18 sampling sites, selected from the PHYTOBS-Network dataset according to requirements of time series quality and geographical location of sampling sites established as part of the MARCO-COLO project. This dataset was also formatted according to a template imposed for the European project.
Catalogue PIGMA