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In October 2019 we chose 15 sites from the 2019 EVHOE survey for environmental DNA (eDNA) sampling. The French international EVHOE bottom trawl survey is carried out annually during autumn in the BoB to monitor demersal fish resources. At each site, we sampled seawater using Niskin bottles deployed with a circular rosette. There were nine bottles on the rosette, each of them able to hold ∼5 l of water. At each site, we first cleaned the circular rosette and bottles with freshwater, then lowered the rosette (with bottles open) to 5 m above the sea bottom, and finally closed the bottles remotely from the boat. The 45 l of sampled water was transferred to four disposable and sterilized plastic bags of 11.25 l each to perform the filtration on-board in a laboratory dedicated to the processing of eDNA samples. To speed up the filtration process, we used two identical filtration devices, each composed of an Athena® peristaltic pump (Proactive Environmental Products LLC, Bradenton, Florida, USA; nominal flow of 1.0 l min–1 ), a VigiDNA 0.20 μm filtration capsule (SPYGEN, le Bourget du Lac, France), and disposable sterile tubing. Each filtration device filtered the water contained in two plastic bags (22.5 l), which represent two replicates per sampling site. We followed a rigorous protocol to avoid contamination during fieldwork, using disposable gloves and single-use filtration equipment and plastic bags to process each water sample. At the end of each filtration, we emptied the water inside the capsule that we replaced by 80 ml of CL1 conservation buffer and stored the samples at room temperature following the specifications of the manufacturer (SPYGEN, Le Bourget du Lac, France). We processed the eDNA capsules at SPYGEN, following the protocol proposed by Polanco-Fernández et al., (2020). Half of the extracted DNA was processed by Sinsoma using newly developped ddPCR assays for European seabass (Dicentrachus labrax), European hake (Merluccius merluccius) and blackspot seabream (Pagellus bogaraveo). The other half of the extracted DNA was analysed using metabarcoding with teleo primer. The raw metabarcoding data set is available at https://www.doi.org/10.16904/envidat.442 Bottom trawling using a GOV trawl was carried out before or after water sampling. The catch was sorted by species and catches in numbers and weight were recorded. No blackspot seabream individuals were caught. Data content: * ddPCR/: contains the ddPCR counts and DNA concentrations for each sample and species. * SampleInfo/: contains the filter volume for each eDNA sample. * StationInfo/: contains metadata related to the data collected in the field for each filter. * Metabarcoding/: contains metabarcoding results for teleoprimer. * Trawldata/: contains catch data in numbers and weight (kg).
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Marine protected areas (MPAs) provide biodiversity conservation benefits in a range of marine habitats. Many protected areas are established and governed through top-down or shared governance arrangements, yet little is known about how these governance strategies compare in terms of the protection benefits they provide to MPAs globally. Using an extensive data set of MPA conditions, we developed a set of Bayesian hierarchical models to understand the role of shared governance versus federal governance on reef fish biomass from 218 global MPAs. We find greater reef fish biomass benefits in MPAs with shared governance than with top-down, or federal arrangements. We also find greater benefits in older MPAs and MPAs farther away from shore. Our results highlight the fundamental importance of multi-stakeholder participation for improving conservation outcomes, representing an important conservation opportunity for new or existing MPAs.
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The Commission for the Conservation Southern Bluefin Tuna collects a variety of data types from its Members and Cooperating Non-Members, including total catch, catch and effort data, and catch at size data. Catch, size and trade information is also collected through the Commission's Catch Documentation Scheme, Japanese import statistics, and other monitoring programs. Annual catches provided on this page are reported on a calendar year basis. CCSBT Members use quota years (not calendar years) for managing catching limits, but quota years differ between Members, so calendar years are used to provide catches on a common timescale. Relevant subsets and summaries of these data are provided below. All figures are subject to change as improved data or estimates become available. In particular, reviews of SBT data in 2006 indicated that southern bluefin tuna catches may have been substantially under-reported over the previous 10-20 years and the data presented here do not include estimates for this unreported catch. Also, data for the last reported year of catch (2020) are preliminary and are subject to revision. Any latitudes and longitudes presented in these summaries represent the north western corner of the relevant grid, which is a 5*5 grid unless otherwise specified. Other information on Members and Cooperating Non-Members fishing activities appears in the reports of the Extended Scientific Committee, Compliance Committee and Extended Commission.
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As part of the marine water quality monitoring of the “Pertuis” and the “baie de l’Aiguillon” (France), commissioned by the OFB and carried out by setec énergie environnement, three monitoring stations were installed. Two of them were set up at the mouths of the Charente and Seudre rivers on February 6 and 27, 2019, respectively, while a third was deployed in the Bay of Aiguillon on March 24, 2021. The dataset presented here concerns the station installed in the Bay of Aiguillon. Measurements are organized into .csv files, with one file per year. Data is collected using a WiMO multiparameter probe, which records the following parameters: • Temperature (-2 to 35 °C) • Conductivity (0 to 100 mS/cm) • Pressure (0 to 30 m) • Turbidity (0 to 4000 NTU) • Dissolved Oxygen (0 to 23 mg/L & 0 to 250 %) • Fluorescence (0 to 500 ppb)
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As part of the marine water quality monitoring of the “Pertuis” and the “baie de l’Aiguillon” (France), commissioned by the OFB and carried out by setec énergie environnement, three monitoring stations were installed. Two of them were set up at the mouths of the Charente and Seudre rivers on February 6 and 27, 2019, respectively, while a third was deployed in the Bay of Aiguillon on March 24, 2021. The dataset presented here concerns the station installed in the Charente estuary. Measurements are organized into .csv files, with one file per year. Data is collected using a SAMBAT multiparameter probe, which records the following parameters: - Temperature (-5 to 35 °C) - Conductivity (0 to 10 mS/cm) - Pressure (0 to 10 m) - Turbidity (0 to 300 NTU) - Dissolved Oxygen (0 to 20 mg/L & 0 to 200 %) - Fluorescence (0 to 50 µg/l) - PH (0/14)
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This dataset gathers isotopic ratios (carbon and nitrogen) and concentrations of both priority (mercury species and polychlorinated biphenyls congeners) and emerging (musks and sunscreens) micropollutants measured in a host-parasite couple (hake Merluccius merluccius muscle and in its parasite Anisakis sp) from the south of Bay of Biscay in 2018. In addition, the hake infection degree measured as the number of Anisakis sp. larvae was added for each hake collected.
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The Arcachon Bay is a unique and ecologically important meso-tidal lagoon on the Atlantic coast of south-west France. The Arcachon Bay has the largest area of dwarf seagrass (Z. noltei) in Europe, the extent of which was stable in their extent between the 1950s and 1990s, but a decline in seagrass was observed in mid-2000. The decline of Zostera (seagrass) may have a significant impact on sedimentation in this coastal ecosystem rich in marine life. Interface cores were collected in September 2022 to determine sediment and mass accumulation rates (SAR, MAR) in the Arcachon Bay. Ten study areas were selected, distributed over most of the areas where seagrass meadows are actually observed. Two sites were visited each time, one with the presence of Zostera noltei in good condition (Healthy) and the other where the sediment was bare (Bare). Maximum water heights during spring tides range from 3.44 m for the deepest site (Garrèche) to 2.09 m for the shallowest site (Fontaines). A total of 20 sediment cores were sampled and carefully extruded every 1 cm from the top to the bottom of the core. The sediment layers were used to determine dry bulk density and selected radioisotope activities: DBD, 210Pb, 226Ra, 137Cs, 228Th and 40K expressed as %K).
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Three saltmarshes, Aiguillon, Brouage, Fier d'Ars, located in the Pertuis-Charentais Sea along the south-west coast of France, were studied to evaluate their sediment and mass accumulation rates (SAR; MAR) based on 210Pb and 137Cs profiles in sediments. Coastal saltmarshes play indeed an essential role in providing services such as coastal protection and supporting biodiversity. Saltmarshes are also critical environments for the accumulation of sedimentary organic carbon (blue carbon). However, the number of studies on saltmarshes remains underrepresented compared to studies on mangroves and seagrass. This work is a contribution to the effort to document sediment and mass accumulation rates of saltmarshes.A total of 16 1m sediment cores were collected in the three saltmarshes (Aiguillon, Brouage, Fier d'Ars) in 2021 and 2022 using an Eijkelkamp stainless steel peat sampler. Each sediment core was sampled every 1 cm from the top to the bottom of the core. The sediment layers were used to determine dry bulk density and selected radioisotope activities (210Pb, 226Ra, 137Cs, 228Th, 137Cs). Combining excess 210Pb and 137Cs has allowed to establish a reliable chronology of sediment deposition on a multidecadal timescale.
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210Pb, 226Ra and 137Cs were measured by non-destructive gamma spectrometry on marine sediment cores, collected during RIKEAU 2002 cruise on board r/v Thalia, on the shelf of the Bay of Biscay
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The ICES Working Group on Fisheries Benthic Impact and Trade-offs (WGFBIT) has developed an assessment framework based on the life history trait longevity, to evaluate the benthic impact of fisheries at the regional scale. In order to apply this framework to the Mediterranean sea, several Mediterranean longevity databases were merged together with existing North-East Atlantic ones to develop a common database. Longevity was fuzzy coded into four longevity classes: <1, 1-3, 3-10 and >10 years. Both benthic mega and macrofauna organisms are included in this dataset. Further details about both the purpose and the methodology may be found in ICES (2022) and Cuyvers et al. (2023). The result of the final dataset merging is one dataset containing the fuzzy coded average longevity (and standard deviation) for 2264 taxa and for each, the number of databases used.
Catalogue PIGMA