This dataset contains the dynamical outputs of a global ocean simulation coupling dynamics and biogeochemistry at ¼° over the year 2019. The simulation has been performed using the coupled circulation/ecosystem model NEMO/PISCES (https://www.nemo-ocean.eu/), which is here enhanced to perform an ensemble simulation with explicit simulation of modeling uncertainties in the physics and in the biogeochemistry. This dataset is one of the 40 members of the ensemble simulation. This study was part of the Horizon Europe project SEAMLESS (https://seamlessproject.org/Home.html), with the general objective of improving the analysis and forecast of ecosystem indicators.   See Popov et al. (https://os.copernicus.org/articles/20/155/2024/) for more details on the study.

The glider operations in the MOOSE network started to be deployed regularly in 2010 in the North Western Mediterranean Sea, thanks to the setup of national glider facilities at DT-INSU/Ifremer (http://www.dt.insu.cnrs.fr/gliders/gliders.php) and with the support of the European project FP7-PERSEUS. Two endurance lines are operated: MooseT00 (Nice-Calvi; Ligurian Sea) and MooseT02 (Marseille-Menorca; Gulf of Lion). The all dataset here corresponds to raw data in the EGO format.

This dataset is composed by the climatological seasonal field of the Ocean Salinity Stratification as defined from the Brunt-Vaisala frequency limited to the upper 300 m depth. The details are given in Maes, C., and T. J. O’Kane (2014), Seasonal variations of the upper ocean salinity stratification in the Tropics, J. Geophys. Res. Oceans, 119, 1706–1722, doi:10.1002/2013JC009366.

The continuously updated version of Copernicus Argo floats realtime currents product is distributed from Copernicus Marine catalogue: - https://resources.marine.copernicus.eu/?option=com_csw&view=details&product_id=INSITU_GLO_UV_NRT_OBSERVATIONS_013_048 The Argo current product generated by Copernicus in situ TAC is derived from the original trajectory data from Argo GDAC (Global Data Assembly Center) available at: - Argo float data and metadata from Global Data Assembly Centre (Argo GDAC). SEANOE. https://doi.org/10.17882/42182 In 2021, the GDAC distributes data from more than 15,000 Argo floats. Deep ocean current is calculated from floats drift at parking depth, surface current is calculated from float surface drift. An Argo float drifts freely in the global ocean, performing regular observation cycles. An observation cycle usually spreads over 10 days :  - a surface descent to a parking depth (generally 1500 meters deep) - a 10-day drift at this parking depth - an ascent to the surface (vertical profile) - A short surface drift for data transmission The data transmitted at each cycle contain temperature, salinity observations (and additional biogeochemical parameters if applicable), positions (gps or argos), technical data. The ocean current product contains a NetCDF file for each Argo float. It is updated daily in real time by automated processes. For each cycle it contains the surface and deep current variables: - Date (time, time_qc) - Position  (latitude, longitude, position_qc) - Pressure (pres, pres_qc, representative_park_pressure for parking drift, 0 decibar for surface drift) - Current (ewct, ewct_qc, nsct, nsct_qc; the current vector is positioned and dated at the last position of the N-1 cycle) - Duration (days) of the current variable sampling (time_interval) - Grounded indicator - Positions and dates have a QC 1 (good data). Positions and dates that do not have a QC 1 are ignored. The positions are measured during the surface drift (Argos or GPS positioning). For the deep current of cycle N, we take the last good position of cycle N-1 and the first good position of cycle N. For the surface current of cycle N, we take the first and last good position of the N cycle.  

This dataset contains (1) outputs of Species Distribution Models (SDMs) for marine fish and (2) estimation of species richness using those outputs. SDMs use correlative algorithms to link presences of species to the environment recorded in place and time of their observation, calculate their environmental niche, estimate the geographical location suitable for them (habitat suitability) and in fine their geographical distribution. Here, we downloaded presences of marine fish from two open source databases, GBIF and OBIS and 13 environmental predictors known to be relevant in fish ecology (list below). We used the CEPHALOPOD pipeline, a framework allowing the user the compute a lot of species at the same time, with comparable methods and a verification of quality of inputs and outputs at every steps (Schickele et al., 2025). 3,642 fish made it to the final step and have the habitat suitability estimated for 12 month + annual mean, 10 bootstrap to quantify uncertainty and x algorithms. Those estimation are available in the “L2_marine_fish_*.nc” files, organized by water column position (bathydemersal, bathypelagic, benthopelagic, demersal, pelagic-neritic, pelagic-oceanic, reef-associated). We then used their annual mean to estimate their actual geographic distribution by applying (1) a bathymetric filtration and (2) a cutting procedure which removes isolated patches of high suitability (i.e., potential distribution) with no recorded presences (i.e., considered to be outside of the species dispersion range). Those geographic distribution were then stacked to estimate global species richness of every fish and each water column position.

This dataset is an aggregation of all availale in situ data from Coriolis and Copernicus in situ data centres, observed in the French DCSMM area. It contains 5167 NetCDF CF files from 1903 to 2017. Each file contains the observations of a specific platform (e.g. vessel, mooring site, sea level station). Observed parameters are temperature, salinity, pressure, oxygen, nitrate, chlorophyll (and other bio-geo-chemicals), current, wave, sea level, river flow.  

The In Situ delayed mode product designed for reanalysis purposes integrates the best available version of in situ data for ocean surface currents. The data are collected from the Surface Drifter Data Assembly Centre (SD-DAC at NOAA AOML). All surface drifters data have been processed to check for drogue loss. Drogued and undrogued drifting buoy surface ocean currents are provided with a drogue presence flag as well as a wind slippage correction for undrogued buoys. Altimeter and wind data have been used to extract the direct wind slippage from the total drifting buoy velocities. This product is designed to be assimilated into or for validation purposes of operational models operated by ocean forecasting centers for reanalysis purposes or for research community. These users need data aggregated and quality controlled in a reliable and documented manner.

Ensemble simulations of the ecosystem model Apecosm (https://apecosm.org) forced by the IPSL-CM6-LR climate model with the climate change scenario SSP5-8.5. The output files contain yearly mean biomass density for 3 communities (epipelagic, mesopelagic migratory and mesopelagic redidents) and 100 size classes (ranging from 0.12cm to 1.96m) The model grid file is also provided. Units are in J/m2 and can be converted in kg/m2 by dividing by 4e6. These outputs are associated with the "Assessing the time of emergence of marine ecosystems from global to local scales using IPSL-CM6A-LR/APECOSM climate-to-fish ensemble simulations" paper from the Earth's Future "Past and Future of Marine Ecosystems" Special Collection.

This delayed mode product designed for reanalysis purposes integrates the best available version of in situ data for ocean surface currents and current vertical profiles. It concerns three delayed time datasets dedicated to near-surface currents measurements coming from three platforms (Lagrangian surface drifters, High Frequency radars and Argo floats) and velocity profiles within the water column coming from the Acoustic Doppler Current Profiler (ADCP, vessel mounted only). The latest version of Copernicus surface and sub-surface water velocity product is also distributed from Copernicus Marine catalogue.

Mesoscale eddy detection from 2000 to 2021 are computed using the AMEDA algorithm applied on AVISO L4 absolute dynamic topography at 1/8th degree. Eddy numbers correspond to tracks referenced in the DYNED atlas (https://doi.org/10.14768/2019130201.2). Detection is based on AVISO delyed-time product from 2000 to 2019 and on day+6 near-real-time altimetry from 2020 to 2021. Colocalisation is then made with available in situ profiles from Coriolis Ocean Dataset for Reanalysis (CORA) delayed-time data (113486 profiles) and Copernicus near-real-time profiles (43567).