This dataset contains the dynamical outputs of a global ocean simulation coupling dynamics and biogeochemistry at ¼° over the year 2019. The simulation has been performed using the coupled circulation/ecosystem model NEMO/PISCES (https://www.nemo-ocean.eu/), which is here enhanced to perform an ensemble simulation with explicit simulation of modeling uncertainties in the physics and in the biogeochemistry. This dataset is one of the 40 members of the ensemble simulation. This study was part of the Horizon Europe project SEAMLESS (https://seamlessproject.org/Home.html), with the general objective of improving the analysis and forecast of ecosystem indicators.   See Popov et al. (https://os.copernicus.org/articles/20/155/2024/) for more details on the study.

This dataset contains (1) outputs of Species Distribution Models (SDMs) for marine fish and (2) estimation of species richness using those outputs. SDMs use correlative algorithms to link presences of species to the environment recorded in place and time of their observation, calculate their environmental niche, estimate the geographical location suitable for them (habitat suitability) and in fine their geographical distribution. Here, we downloaded presences of marine fish from two open source databases, GBIF and OBIS and 13 environmental predictors known to be relevant in fish ecology (list below). We used the CEPHALOPOD pipeline, a framework allowing the user the compute a lot of species at the same time, with comparable methods and a verification of quality of inputs and outputs at every steps (Schickele et al., 2025). 3,642 fish made it to the final step and have the habitat suitability estimated for 12 month + annual mean, 10 bootstrap to quantify uncertainty and x algorithms. Those estimation are available in the “L2_marine_fish_*.nc” files, organized by water column position (bathydemersal, bathypelagic, benthopelagic, demersal, pelagic-neritic, pelagic-oceanic, reef-associated). We then used their annual mean to estimate their actual geographic distribution by applying (1) a bathymetric filtration and (2) a cutting procedure which removes isolated patches of high suitability (i.e., potential distribution) with no recorded presences (i.e., considered to be outside of the species dispersion range). Those geographic distribution were then stacked to estimate global species richness of every fish and each water column position.

The OceanGliders initiative (formerly EGO) is a gathering of several teams of oceanographers, interested in developing the use of gliders for ocean observations. OceanGliders started in Europe with members from France, Germany, Italy, Norway, Spain, and the United Kingdom. The partners of OceanGliders have been funded by both European and national agencies to operate gliders for various purposes and at different sites. Coordinated actions are being set up for these sites in order to demonstrate the capabilities of a fleet of gliders for sampling the ocean, with a given scientific and/or operational objective. Gliders were developed since the 90’s to carry out in-situ observations of the upper 1km of the ocean, filling the gaps left by the existing observing systems. Gliders look like small autonomous robotic underwater vehicles which that uses an engine to change their buoyancy. While gliding from surface to about 1000 meters, gliders provide real-time physical and biogeochemical data along their transit.  They observe temperature, salinity, pressure, biogeochemical data or acoustic data. The OceanGliders GDAC handled at Ifremer/France aggregates the data and metadata from glider deployments provided by the DACs or PIs. The OceanGliders unique DOI publishes the quaterly snapshot of the whole GDAC content and preserves its successive quaterly versions (unique DOI for easy citability, preservation of quaterly versions for reproducibility).   The OceanGliders unique DOI references all individual glider deployment DOIs provided by the DACs or PIs, and with data in the GDAC. DACs or PIs may use the data processing chain published at http://doi.org/10.17882/45402 to generate glider NetCDF GDAC files.

The Coriolis Ocean Dataset for Reanalysis for the Ireland-Biscay-Iberia region (hereafter CORA-IBI) product is a regional dataset of in situ temperature and salinity measurements. The latest version of the product covers the period 1950-2014. The CORA-IBI observations comes from many different sources collected by Coriolis data centre in collaboration with the In Situ Thematic Centre of the Copernicus Marine Service (CMEMS INSTAC).  The observations integrated in the CORA-IBI product have been acquired both by autonomous platforms (Argo profilers, fixed moorings, gliders, drifters, sea mammals, fishery observing system from the RECOPESCA program), research or opportunity vessels ( CTDs, XBTs, ferrybox).  This CORA-IBI product has been controlled using an objective analysis (statistical tests) method and a visual quality control (QC). This QC procedure has been developed with the main objective to improve the quality of the dataset to the level required by the climate application and the physical ocean re-analysis activities. It provides T and S individual profiles on their original level with QC flags. The reference level of measurements is immersion (in meters) or pressure (in decibars). It is a subset on the IBI (Iberia-Bay-of-Biscay Ireland) of the CMEMS product referenced hereafter. The main new features of this regional product compared with previous global CORA products are the incorporation of coastal profiles from fishery observing system (RECOPESCA programme) in the Bay of Biscay and the English Channel as well as the use of an historical dataset collected by the Service hydrographique de la Marine (SHOM).

This In Situ delayed mode product integrates the best available version of in situ oxygen, chlorophyll / fluorescence and nutrients data. The latest version of Copernicus delayed-mode BGC (bio-geo-chemical) product is also distributed from Copernicus Marine catalogue.

The upper ocean pycnocline (UOP) monthly climatology is based on the ISAS20 ARGO dataset containing Argo and Deep-Argo temperature and salinity profiles on the period 2002-2020. Regardless of the season, the UOP is defined as the shallowest significant stratification peak captured by the method described in Sérazin et al. (2022), whose detection threshold is proportional to the standard deviation of the stratification profile. The three main characteristics of the UOP are provided -- intensity, depth and thickness -- along with hydrographic variables at the upper and lower edges of the pycnocline, the Turner angle and density ratio at the depth of the UOP. A stratification index (SI) that evaluates the amount of buoyancy required to destratify the upper ocean down to a certain depth, is also included. When evaluated at the bottom of the UOP, this gives the upper ocean stratification index (UOSI) as discussed in Sérazin et al. (2022). Three mixed layer depth variables are also included in this dataset, including the one using the classic density threshold of 0.03 kg.m-3, along with the minimum of these MLD variables. Several statistics of the UOP characteristics and the associated quantities are available in 2°×2° bins for each month of the year, whose results were smoothed using a diffusive gaussian filter with a 500 km scale. UOP characteristics are also available for each profile, with all the profiles sorted in one file per month.

Ensemble simulations of the ecosystem model Apecosm (https://apecosm.org) forced by the IPSL-CM6-LR climate model with the climate change scenario SSP5-8.5. The output files contain yearly mean biomass density for 3 communities (epipelagic, mesopelagic migratory and mesopelagic redidents) and 100 size classes (ranging from 0.12cm to 1.96m) The model grid file is also provided. Units are in J/m2 and can be converted in kg/m2 by dividing by 4e6. These outputs are associated with the "Assessing the time of emergence of marine ecosystems from global to local scales using IPSL-CM6A-LR/APECOSM climate-to-fish ensemble simulations" paper from the Earth's Future "Past and Future of Marine Ecosystems" Special Collection.

Observations of Sea surface temperature and salinity are now obtained from voluntary sailing ships using medium or small size sensors. They complement the networks installed on research vessels or commercial ships. The delayed mode dataset proposed here is upgraded annually as a contribution to GOSUD (http://www.gosud.org )

This product contains observations and gridded files from two up-to-date carbon and biogeochemistry community data products: Surface Ocean Carbon ATlas SOCATv2023 and GLobal Ocean Data Analysis Project GLODAPv2.2023. The SOCATv2023-OBS dataset contains >25 million observations of fugacity of CO2 of the surface global ocean from 1957 to early 2023. The quality control procedures are described in Bakker et al. (2016). These observations form the basis of the gridded products included in SOCATv2023-GRIDDED: monthly, yearly and decadal averages of fCO2 over a 1x1 degree grid over the global ocean, and a 0.25x0.25 degree, monthly average for the coastal ocean. GLODAPv2.2023-OBS contains >1 million observations from individual seawater samples of temperature, salinity, oxygen, nutrients, dissolved inorganic carbon, total alkalinity and pH from 1972 to 2021. These data were subjected to an extensive quality control and bias correction described in Olsen et al. (2020). GLODAPv2-GRIDDED contains global climatologies for temperature, salinity, oxygen, nitrate, phosphate, silicate, dissolved inorganic carbon, total alkalinity and pH over a 1x1 degree horizontal grid and 33 standard depths using the observations from the previous major iteration of GLODAP, GLODAPv2. SOCAT and GLODAP are based on community, largely volunteer efforts, and the data providers will appreciate that those who use the data cite the corresponding articles (see References below) in order to support future sustainability of the data products.

The In Situ delayed mode product designed for reanalysis purposes integrates the best available version of in situ data for ocean surface currents. The data are collected from the Surface Drifter Data Assembly Centre (SD-DAC at NOAA AOML). All surface drifters data have been processed to check for drogue loss. Drogued and undrogued drifting buoy surface ocean currents are provided with a drogue presence flag as well as a wind slippage correction for undrogued buoys. Altimeter and wind data have been used to extract the direct wind slippage from the total drifting buoy velocities. This product is designed to be assimilated into or for validation purposes of operational models operated by ocean forecasting centers for reanalysis purposes or for research community. These users need data aggregated and quality controlled in a reliable and documented manner.