NetCDF-4
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"'Short description:''' The High-Resolution Ocean Colour (HR-OC) Consortium (Brockmann Consult, Royal Belgian Institute of Natural Sciences, Flemish Institute for Technological Research) distributes Level 4 (L4) Turbidity (TUR, expressed in FNU), Solid Particulate Matter Concentration (SPM, expressed in mg/l), particulate backscattering at 443nm (BBP443, expressed in m-1) and chlorophyll-a concentration (CHL, expressed in µg/l) for the Sentinel 2/MSI sensor at 100m resolution for a 20km coastal zone. The products are delivered on a geographic lat-lon grid (EPSG:4326). BBP443, constitute the category of the 'optics' products. The BBP443 product is generated from the L3 RRS products using a quasi-analytical algorithm (Lee et al. 2002). he 'tur_tsm_chl' products include TUR, SPM and CHL. They are retrieved through the application of automated switching algorithms to the RRS spectra adapted to varying water conditions (Novoa et al. 2017). The GEOPHYSICAL product consists of the Chlorophyll-a concentration (CHL) retrieved via a multi-algorithm approach with optimized quality flagging (O'Reilly et al. 2019, Gons et al. 2005, Lavigne et al. 2021). Monthly products (P1M) are temporal aggregates of the daily L3 products. Daily products contain gaps in cloudy areas and where there is no overpass at the respective day. Aggregation collects the non-cloudy (and non-frozen) contributions to each pixel. Contributions are averaged per variable. While this does not guarantee data availability in all pixels in case of persistent clouds, it provides a more complete product compared to the sparsely filled daily products. The Monthly L4 products (P1M) are generally provided withing 4 days after the last acquisition date of the month. Daily gap filled L4 products (P1D) are generated using the DINEOF (Data Interpolating Empirical Orthogonal Functions) approach which reconstructs missing data in geophysical datasets by using a truncated Empirical Orthogonal Functions (EOF) basis in an iterative approach. DINEOF reconstructs missing data in a geophysical dataset by extracting the main patterns of temporal and spatial variability from the data. While originally designed for low resolution data products, recent research has resulted in the optimization of DINEOF to handle high resolution data provided by Sentinel-2 MSI, including cloud shadow detection (Alvera-Azcárate et al., 2021). These types of L4 products are generated and delivered one month after the respective period. '''Processing information:''' The HR-OC processing system is deployed on Creodias where Sentinel 2/MSI L1C data are available. The production control element is being hosted within the infrastructure of Brockmann Consult. The processing chain consists of: * Resampling to 60m and mosaic generation of the set of Sentinel-2 MSI L1C granules of a single overpass that cover a single UTM zone. * Application of a glint correction taking into account the detector viewing angles * Application of a coastal mask with 20km water + 20km land. The result is a L1C mosaic tile with data just in the coastal area optimized for compression. * Level 2 processing with pixel identification (IdePix), atmospheric correction (C2RCC and ACOLITE or iCOR), in-water processing and merging (HR-OC L2W processor). The result is a 60m product with the same extent as the L1C mosaic, with variables for optics, transparency, and geophysics, and with data filled in the water part of the coastal area. * invalid pixel identification takes into account corrupted (L1) pixels, clouds, cloud shadow, glint, dry-fallen intertidal flats, coastal mixed-pixels, sea ice, melting ice, floating vegetation, non-water objects, and bottom reflection. * Daily L3 aggregation merges all Level 2 mosaics of a day intersecting with a target tile. All valid water pixels are included in the 20km coastal stripes; all other values are set to NaN. There may be more than a single overpass a day, in particular in the northern regions. This step comprises resampling to the 100m target grid. * Monthly L4 aggregation combines all Level 3 products of a month and a single tile. The output is a set of 3 NetCDF datasets for (1) optics and (2) turbidity, suspended matter and chlorophyll concentration, respectively for the month. * Gap filling combines all daily products of a period and generates (partially) gap-filled daily products again. The output of gap filling are 2 datasets for (1) optics (BBP443 only) and (2) turbidity, suspended mattr and chlorophyll concentration per day. '''Description of observation methods/instruments:''' Ocean colour technique exploits the emerging electromagnetic radiation from the sea surface in different wavelengths. The spectral variability of this signal defines the so-called ocean colour which is affected by the presence of phytoplankton. '''Quality / Accuracy / Calibration information:''' A detailed description of the calibration and validation activities performed over this product can be found on the CMEMS web portal and in CMEMS-BGP_HR-QUID-009-201_to_212. '''Suitability, Expected type of users / uses:''' This product is meant for use for educational purposes and for the managing of the marine safety, marine resources, marine and coastal environment and for climate and seasonal studies. '''Dataset names: ''' *cmems_obs_oc_med_bgc_tur_spm_chl_nrt_l4-hr-mosaic_P1M-v01 *cmems_obs_oc_med_bgc_optics_nrt_l4-hr-mosaic_P1M-v01 *cmems_obs_oc_med_bgc_tur_spm_chl_nrt_l4-hr-mosaic_P1D-v01 *cmems_obs_oc_med_bgc_optics_nrt_l4-hr-mosaic_P1D-v01 '''Files format:''' *netCDF-4, CF-1.7 *INSPIRE compliant." '''DOI (product) :''' https://doi.org/10.48670/moi-00110
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'''This product has been archived''' For operational and online products, please visit https://marine.copernicus.eu '''Short description:''' This product consists of vertical profiles of the concentration of nitrates, phosphates and silicates, computed for each Argo float equipped with an oxygen sensor. The method called CANYON (Carbonate system and Nutrients concentration from hYdrological properties and Oxygen using a Neural-network) is based on a neural-network trained using high quality nutrient data collected over the last 30 years (GLODAPv2 data base, https://www.glodap.info/). The method is applied to each Argo float equipped with an oxygen sensor using as input the properties measured by the float (pressure, temperature, salinity, oxygen), and its date and position. '''DOI (product) :''' https://doi.org/10.48670/moi-00048 '''Product Citation:''' Please refer to our Technical FAQ for citing products: http://marine.copernicus.eu/faq/cite-cmems-products-cmems-credit/?idpage=169.
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'''Short description:''' For the NWS/IBI Ocean- Sea Surface Temperature L3 Observations . This product provides daily foundation sea surface temperature from multiple satellite sources. The data are intercalibrated. This product consists in a fusion of sea surface temperature observations from multiple satellite sensors, daily, over a 0.02° resolution grid. It includes observations by polar orbiting and geostationary satellites . The L3S SST data are produced selecting only the highest quality input data from input L2P/L3P images within a strict temporal window (local nightime), to avoid diurnal cycle and cloud contamination. The observations of each sensor are intercalibrated prior to merging using a bias correction based on a multi-sensor median reference correcting the large-scale cross-sensor biases. 3 more datasets are available that only contain "per sensor type" data : Polar InfraRed (PIR), Polar MicroWave (PMW), Geostationary InfraRed (GIR) '''DOI (product) :''' https://doi.org/10.48670/moi-00310
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'''Short description:''' The product MULTIOBS_GLO_PHY_SSS_L3_MYNRT_015_014 is a reformatting and a simplified version of the CATDS L3 product called “2Q” or “L2Q”. it is an intermediate product, that provides, in daily files, SSS corrected from land-sea contamination and latitudinal bias, with/without rain freshening correction. '''DOI (product) :''' https://doi.org/10.48670/mds-00368
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'''This product has been archived''' For operationnal and online products, please visit https://marine.copernicus.eu '''DEFINITION''' We have derived an annual eutrophication and eutrophication indicator map for the North Atlantic Ocean using satellite-derived chlorophyll concentration. Using the satellite-derived chlorophyll products distributed in the regional North Atlantic CMEMS REP Ocean Colour dataset (OC- CCI), we derived P90 and P10 daily climatologies. The time period selected for the climatology was 1998-2017. For a given pixel, P90 and P10 were defined as dynamic thresholds such as 90% of the 1998-2017 chlorophyll values for that pixel were below the P90 value, and 10% of the chlorophyll values were below the P10 value. To minimise the effect of gaps in the data in the computation of these P90 and P10 climatological values, we imposed a threshold of 25% valid data for the daily climatology. For the 20-year 1998-2017 climatology this means that, for a given pixel and day of the year, at least 5 years must contain valid data for the resulting climatological value to be considered significant. Pixels where the minimum data requirements were met were not considered in further calculations. We compared every valid daily observation over 2020 with the corresponding daily climatology on a pixel-by-pixel basis, to determine if values were above the P90 threshold, below the P10 threshold or within the [P10, P90] range. Values above the P90 threshold or below the P10 were flagged as anomalous. The number of anomalous and total valid observations were stored during this process. We then calculated the percentage of valid anomalous observations (above/below the P90/P10 thresholds) for each pixel, to create percentile anomaly maps in terms of % days per year. Finally, we derived an annual indicator map for eutrophication levels: if 25% of the valid observations for a given pixel and year were above the P90 threshold, the pixel was flagged as eutrophic. Similarly, if 25% of the observations for a given pixel were below the P10 threshold, the pixel was flagged as oligotrophic. '''CONTEXT''' Eutrophication is the process by which an excess of nutrients – mainly phosphorus and nitrogen – in a water body leads to increased growth of plant material in an aquatic body. Anthropogenic activities, such as farming, agriculture, aquaculture and industry, are the main source of nutrient input in problem areas (Jickells, 1998; Schindler, 2006; Galloway et al., 2008). Eutrophication is an issue particularly in coastal regions and areas with restricted water flow, such as lakes and rivers (Howarth and Marino, 2006; Smith, 2003). The impact of eutrophication on aquatic ecosystems is well known: nutrient availability boosts plant growth – particularly algal blooms – resulting in a decrease in water quality (Anderson et al., 2002; Howarth et al.; 2000). This can, in turn, cause death by hypoxia of aquatic organisms (Breitburg et al., 2018), ultimately driving changes in community composition (Van Meerssche et al., 2019). Eutrophication has also been linked to changes in the pH (Cai et al., 2011, Wallace et al. 2014) and depletion of inorganic carbon in the aquatic environment (Balmer and Downing, 2011). Oligotrophication is the opposite of eutrophication, where reduction in some limiting resource leads to a decrease in photosynthesis by aquatic plants, reducing the capacity of the ecosystem to sustain the higher organisms in it. Eutrophication is one of the more long-lasting water quality problems in Europe (OSPAR ICG-EUT, 2017), and is on the forefront of most European Directives on water-protection. Efforts to reduce anthropogenically-induced pollution resulted in the implementation of the Water Framework Directive (WFD) in 2000. '''CMEMS KEY FINDINGS''' Some coastal and shelf waters, especially between 30 and 400N showed active oligotrophication flags for 2020, with some scattered offshore locations within the same latitudinal belt also showing oligotrophication. Eutrophication index is positive only for a small number of coastal locations just north of 40oN, and south of 30oN. In general, the indicator map showed very few areas with active eutrophication flags for 2019 and for 2020. The Third Integrated Report on the Eutrophication Status of the OSPAR Maritime Area (OSPAR ICG-EUT, 2017) reported an improvement from 2008 to 2017 in eutrophication status across offshore and outer coastal waters of the Greater North Sea, with a decrease in the size of coastal problem areas in Denmark, France, Germany, Ireland, Norway and the United Kingdom. Note: The key findings will be updated annually in November, in line with OMI evolutions. '''DOI (product):''' https://doi.org/10.48670/moi-00195
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'''This product has been archived''' For operationnal and online products, please visit https://marine.copernicus.eu '''Short description:''' The Global Ocean Satellite monitoring and marine ecosystem study group (GOS) of the Italian National Research Council (CNR), in Rome, distributes Level-4 product including the daily interpolated chlorophyll field with no data voids starting from the multi-sensor (MODIS-Aqua, NOAA-20-VIIRS, NPP-VIIRS, Sentinel3A-OLCI at 300m of resolution) (at 1 km resolution) and the monthly averaged chlorophyll concentration for the multi-sensor (at 1 km resolution) and Sentinel-OLCI Level-3 (at 300m resolution). Chlorophyll field are obtained by means of the Mediterranean regional algorithms: an updated version of the MedOC4 (Case 1 waters, Volpe et al., 2019, with new coefficients) and AD4 (Case 2 waters, Berthon and Zibordi, 2004). Discrimination between the two water types is performed by comparing the satellite spectrum with the average water type spectral signature from in situ measurements for both water types. Reference insitu dataset is MedBiOp (Volpe et al., 2019) where pure Case II spectra are selected using a k-mean cluster analysis (Melin et al., 2015). Merging of Case I and Case II information is performed estimating the Mahalanobis distance between the observed and reference spectra and using it as weight for the final merged value. The interpolated gap-free Level-4 Chl concentration is estimated by means of a modified version of the DINEOF algorithm by GOS (Volpe et al., 2018). DINEOF is an iterative procedure in which EOF are used to reconstruct the entire field domain. As first guess, it uses the SeaWiFS-derived daily climatological values at missing pixels and satellite observations at valid pixels. The other Level-4 dataset is the time averages of the L3 fields and includes the standard deviation and the number of observations in the monthly period of integration. '''Processing information:''' Multi-sensor products are constituted by MODIS-AQUA, NOAA20-VIIRS, NPP-VIIRS and Sentinel3A-OLCI. For consistency with NASA L2 dataset, BRDF correction was applied to Sentinel3A-OLCI prior to band shifting and multi sensor merging. Hence, the single sensor OLCI data set is also distributed after BRDF correction. Single sensor NASA Level-2 data are destriped and then all Level-2 data are remapped at 1 km spatial resolution (300m for Sentinel3A-OLCI) using cylindrical equirectangular projection. Afterwards, single sensor Rrs fields are band-shifted, over the SeaWiFS native bands (using the QAAv6 model, Lee et al., 2002) and merged with a technique aimed at smoothing the differences among different sensors. This technique is developed by The Global Ocean Satellite monitoring and marine ecosystem study group (GOS) of the Italian National Research Council (CNR, Rome). Then geophysical fields (i.e. chlorophyll, kd490, bbp, aph and adg) are estimated via state-of-the-art algorithms for better product quality. Level-4 includes both monthly time averages and the daily-interpolated fields. Time averages are computed on the delayed-time data. The interpolated product starts from the L3 products at 1 km resolution. At the first iteration, DINEOF procedure uses, as first guess for each of the missing pixels the relative daily climatological pixel. A procedure to smooth out spurious spatial gradients is applied to the daily merged image (observation and climatology). From the second iteration, the procedure uses, as input for the next one, the field obtained by the EOF calculation, using only a number of modes: that is, at the second round, only the first two modes, at the third only the first three, and so on. At each iteration, the same smoothing procedure is applied between EOF output and initial observations. The procedure stops when the variance explained by the current EOF mode exceeds that of noise. '''Description of observation methods/instruments:''' Ocean colour technique exploits the emerging electromagnetic radiation from the sea surface in different wavelengths. The spectral variability of this signal defines the so-called ocean colour which is affected by the pre+D2sence of phytoplankton. '''Quality / Accuracy / Calibration information:''' A detailed description of the calibration and validation activities performed over this product can be found on the CMEMS web portal. '''Suitability, Expected type of users / uses:''' This product is meant for use for educational purposes and for the managing of the marine safety, marine resources, marine and coastal environment and for climate and seasonal studies. '''Dataset names:''' *dataset-oc-med-chl-multi-l4-chl_1km_monthly-rt-v02 *dataset-oc-med-chl-multi-l4-interp_1km_daily-rt-v02 *dataset-oc-med-chl-olci-l4-chl_300m_monthly-rt-v02 '''Files format:''' *CF-1.4 *INSPIRE compliant '''DOI (product) :''' https://doi.org/10.48670/moi-00113
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'''DEFINITION''' Important note to users: These data are not to be used for navigation. The data is 100 m resolution and as high quality as possible. It has been produced with state-of-the-art technology and validated to the best of the producer’s ability and where sufficient high-quality data were available. These data could be useful for planning and modelling purposes. The user should independently assess the adequacy of any material, data and/or information of the product before relying upon it. Neither Mercator Ocean International/Copernicus Marine Service nor the data originators are liable for any negative consequences following direct or indirect use of the product information, services, data products and/or data. Product overview: This is a satellite derived bathymetry product covering the global coastal area (where data retrieval is possible), with 100 m resolution, based on Sentinel-2. This global coastal product has been developed based on 3 methodologies: Intertidal Satellite-Derived Bathymetry; Physics-based optical Satellite-Derived Bathymetry from RTE inversion; and Wave Kinematics Satellite-Derived Bathymetry from wave dispersion. There is one dataset for each of the methods (including a quality index based on uncertainty) and an additional one where the three datasets were merged (also includes a quality index). Using their expertise and special techniques the consortium tried to achieve an optimal balance between coverage and data quality. '''DOI (product):''' https://doi.org/10.48670/mds-00364
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'''This product has been archived''' For operationnal and online products, please visit https://marine.copernicus.eu '''Short description:''' For the Global Ocean - The IFREMER CERSAT Global Blended Mean Wind Fields include wind components (meridional and zonal), wind module, wind stress, and wind/stress curl and divergence. The associated error estimates are also provided. The estimation of the 6-hourly blended wind products make use of remotely sensed surface wind derived from scatterometers on board ASCAT-A and ASCAT-B (coastal winds) provided by KNMI, remotely wind speeds from the SSMIS radiometer onboard the F16, F17, F18, and F19 satellites provided by Remote Sensing Systems (RSS), and wind speed and direction from the WindSat radiometer onboard the Coriolis satellite, all used as observation inputs for the objective method dealing with the calculation of 6-hourly wind fields over global oceans with 0.25°×0.25° spatial resolution. L4 winds are calculated from L2b products in combination with ECMWF operational wind analyses from January 2016. The analysis is performed for each synoptic time (00h:00; 06h:00; 12h:00; 18h:00 UTC) and with a spatial resolution of 0.25° in longitude and latitude over the global ocean, with a short delay from the real time (24 - 48 hours) in a nominal mode. The blended products will be updated and made available when new remotely sensed data (such as AMSR) is available for Ifremer in near real time. '''DOI (product) :''' https://doi.org/10.48670/moi-00184
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'''DEFINITION''' We have derived an annual eutrophication and eutrophication indicator map for the North Atlantic Ocean using satellite-derived chlorophyll concentration. Using the satellite-derived chlorophyll products distributed in the regional North Atlantic CMEMS MY Ocean Colour dataset (OC- CCI), we derived P90 and P10 daily climatologies. The time period selected for the climatology was 1998-2017. For a given pixel, P90 and P10 were defined as dynamic thresholds such as 90% of the 1998-2017 chlorophyll values for that pixel were below the P90 value, and 10% of the chlorophyll values were below the P10 value. To minimise the effect of gaps in the data in the computation of these P90 and P10 climatological values, we imposed a threshold of 25% valid data for the daily climatology. For the 20-year 1998-2017 climatology this means that, for a given pixel and day of the year, at least 5 years must contain valid data for the resulting climatological value to be considered significant. Pixels where the minimum data requirements were met were not considered in further calculations. We compared every valid daily observation over 2021 with the corresponding daily climatology on a pixel-by-pixel basis, to determine if values were above the P90 threshold, below the P10 threshold or within the [P10, P90] range. Values above the P90 threshold or below the P10 were flagged as anomalous. The number of anomalous and total valid observations were stored during this process. We then calculated the percentage of valid anomalous observations (above/below the P90/P10 thresholds) for each pixel, to create percentile anomaly maps in terms of % days per year. Finally, we derived an annual indicator map for eutrophication levels: if 25% of the valid observations for a given pixel and year were above the P90 threshold, the pixel was flagged as eutrophic. Similarly, if 25% of the observations for a given pixel were below the P10 threshold, the pixel was flagged as oligotrophic. '''CONTEXT''' Eutrophication is the process by which an excess of nutrients – mainly phosphorus and nitrogen – in a water body leads to increased growth of plant material in an aquatic body. Anthropogenic activities, such as farming, agriculture, aquaculture and industry, are the main source of nutrient input in problem areas (Jickells, 1998; Schindler, 2006; Galloway et al., 2008). Eutrophication is an issue particularly in coastal regions and areas with restricted water flow, such as lakes and rivers (Howarth and Marino, 2006; Smith, 2003). The impact of eutrophication on aquatic ecosystems is well known: nutrient availability boosts plant growth – particularly algal blooms – resulting in a decrease in water quality (Anderson et al., 2002; Howarth et al.; 2000). This can, in turn, cause death by hypoxia of aquatic organisms (Breitburg et al., 2018), ultimately driving changes in community composition (Van Meerssche et al., 2019). Eutrophication has also been linked to changes in the pH (Cai et al., 2011, Wallace et al. 2014) and depletion of inorganic carbon in the aquatic environment (Balmer and Downing, 2011). Oligotrophication is the opposite of eutrophication, where reduction in some limiting resource leads to a decrease in photosynthesis by aquatic plants, reducing the capacity of the ecosystem to sustain the higher organisms in it. Eutrophication is one of the more long-lasting water quality problems in Europe (OSPAR ICG-EUT, 2017), and is on the forefront of most European Directives on water-protection. Efforts to reduce anthropogenically-induced pollution resulted in the implementation of the Water Framework Directive (WFD) in 2000. '''CMEMS KEY FINDINGS''' The coastal and shelf waters, especially between 30 and 400N that showed active oligotrophication flags for 2020 have reduced in 2021 and a reversal to eutrophic flags can be seen in places. Again, the eutrophication index is positive only for a small number of coastal locations just north of 40oN in 2021, however south of 40oN there has been a significant increase in eutrophic flags, particularly around the Azores. In general, the 2021 indicator map showed an increase in oligotrophic areas in the Northern Atlantic and an increase in eutrophic areas in the Southern Atlantic. The Third Integrated Report on the Eutrophication Status of the OSPAR Maritime Area (OSPAR ICG-EUT, 2017) reported an improvement from 2008 to 2017 in eutrophication status across offshore and outer coastal waters of the Greater North Sea, with a decrease in the size of coastal problem areas in Denmark, France, Germany, Ireland, Norway and the United Kingdom. '''DOI (product):''' https://doi.org/10.48670/moi-00195
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'''This product has been archived''' For operationnal and online products, please visit https://marine.copernicus.eu '''Short description:''' The low resolution ocean physics analysis and forecast for the North-West European Shelf is produced using a forecasting ocean assimilation model, with tides, at 7 km horizontal resolution. The ocean model is NEMO (Nucleus for European Modelling of the Ocean), using the 3DVar NEMOVAR system to assimilate observations. These are surface temperature, vertical profiles of temperature and salinity, and along track satellite sea level anomaly data. The model is forced by lateral boundary conditions from the UK Met Office North Atlantic Ocean forecast model and by the CMEMS Baltic forecast product [https://resources.marine.copernicus.eu/?option=com_csw&view=details&product_id=BALTICSEA_ANALYSISFORECAST_PHY_003_006 BALTICSEA_ANALYSISFORECAST_PHY_003_006]. The atmospheric forcing is given by the operational UK Met Office Global Atmospheric model. The river discharge is from a daily climatology. Further details of the model, including the product validation are provided in the [http://catalogue.marine.copernicus.eu/documents/QUID/CMEMS-NWS-QUID-004-001.pdf CMEMS-NWS-QUID-004-001]. Products are provided as hourly instantaneous and daily 25-hour, de-tided, averages. The datasets available are temperature, salinity, horizontal currents, sea level, mixed layer depth, and bottom temperature. Temperature, salinity and currents, as multi-level variables, are interpolated from the model 51 hybrid s-sigma terrain-following system to 24 standard geopotential depths (z-levels). Grid-points near to the model boundaries are masked. The product is updated daily, providing a 6-day forecast and the previous 2-day assimilative hindcast. See [http://catalogue.marine.copernicus.eu/documents/PUM/CMEMS-NWS-PUM-004-001_002.pdf CMEMS-NWS-PUM-004-001_002] for further details. '''Associated products:''' This model is coupled with a biogeochemistry model (ERSEM) available as CMEMS product [https://resources.marine.copernicus.eu/?option=com_csw&view=details&product_id=NWSHELF_ANALYSISFORECAST_BGC_004_002 NWSHELF_ANALYSISFORECAST_BGC_004_002] A reanalysis product is available from: [https://resources.marine.copernicus.eu/?option=com_csw&view=details&product_id=NWSHELF_MULTIYEAR_PHY_004_009 NWSHELF_MULTIYEAR_PHY_004_009]. '''DOI (product) :''' https://doi.org/10.48670/moi-00057
Catalogue PIGMA