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NetCDF-4

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  • "'Short description:''' The High-Resolution Ocean Colour (HR-OC) Consortium (Brockmann Consult, Royal Belgian Institute of Natural Sciences, Flemish Institute for Technological Research) distributes Level 4 (L4) Turbidity (TUR, expressed in FNU), Solid Particulate Matter Concentration (SPM, expressed in mg/l), particulate backscattering at 443nm (BBP443, expressed in m-1) and chlorophyll-a concentration (CHL, expressed in µg/l) for the Sentinel 2/MSI sensor at 100m resolution for a 20km coastal zone. The products are delivered on a geographic lat-lon grid (EPSG:4326). BBP443, constitute the category of the 'optics' products. The BBP443 product is generated from the L3 RRS products using a quasi-analytical algorithm (Lee et al. 2002). he 'tur_tsm_chl' products include TUR, SPM and CHL. They are retrieved through the application of automated switching algorithms to the RRS spectra adapted to varying water conditions (Novoa et al. 2017). The GEOPHYSICAL product consists of the Chlorophyll-a concentration (CHL) retrieved via a multi-algorithm approach with optimized quality flagging (O'Reilly et al. 2019, Gons et al. 2005, Lavigne et al. 2021). Monthly products (P1M) are temporal aggregates of the daily L3 products. Daily products contain gaps in cloudy areas and where there is no overpass at the respective day. Aggregation collects the non-cloudy (and non-frozen) contributions to each pixel. Contributions are averaged per variable. While this does not guarantee data availability in all pixels in case of persistent clouds, it provides a more complete product compared to the sparsely filled daily products. The Monthly L4 products (P1M) are generally provided withing 4 days after the last acquisition date of the month. Daily gap filled L4 products (P1D) are generated using the DINEOF (Data Interpolating Empirical Orthogonal Functions) approach which reconstructs missing data in geophysical datasets by using a truncated Empirical Orthogonal Functions (EOF) basis in an iterative approach. DINEOF reconstructs missing data in a geophysical dataset by extracting the main patterns of temporal and spatial variability from the data. While originally designed for low resolution data products, recent research has resulted in the optimization of DINEOF to handle high resolution data provided by Sentinel-2 MSI, including cloud shadow detection (Alvera-Azcárate et al., 2021). These types of L4 products are generated and delivered one month after the respective period. '''Processing information:''' The HR-OC processing system is deployed on Creodias where Sentinel 2/MSI L1C data are available. The production control element is being hosted within the infrastructure of Brockmann Consult. The processing chain consists of: * Resampling to 60m and mosaic generation of the set of Sentinel-2 MSI L1C granules of a single overpass that cover a single UTM zone. * Application of a glint correction taking into account the detector viewing angles * Application of a coastal mask with 20km water + 20km land. The result is a L1C mosaic tile with data just in the coastal area optimized for compression. * Level 2 processing with pixel identification (IdePix), atmospheric correction (C2RCC and ACOLITE or iCOR), in-water processing and merging (HR-OC L2W processor). The result is a 60m product with the same extent as the L1C mosaic, with variables for optics, transparency, and geophysics, and with data filled in the water part of the coastal area. * invalid pixel identification takes into account corrupted (L1) pixels, clouds, cloud shadow, glint, dry-fallen intertidal flats, coastal mixed-pixels, sea ice, melting ice, floating vegetation, non-water objects, and bottom reflection. * Daily L3 aggregation merges all Level 2 mosaics of a day intersecting with a target tile. All valid water pixels are included in the 20km coastal stripes; all other values are set to NaN. There may be more than a single overpass a day, in particular in the northern regions. This step comprises resampling to the 100m target grid. * Monthly L4 aggregation combines all Level 3 products of a month and a single tile. The output is a set of 3 NetCDF datasets for (1) optics and (2) turbidity, suspended matter and chlorophyll concentration, respectively for the month. * Gap filling combines all daily products of a period and generates (partially) gap-filled daily products again. The output of gap filling are 2 datasets for (1) optics (BBP443 only) and (2) turbidity, suspended mattr and chlorophyll concentration per day. '''Description of observation methods/instruments:''' Ocean colour technique exploits the emerging electromagnetic radiation from the sea surface in different wavelengths. The spectral variability of this signal defines the so-called ocean colour which is affected by the presence of phytoplankton. '''Quality / Accuracy / Calibration information:''' A detailed description of the calibration and validation activities performed over this product can be found on the CMEMS web portal and in CMEMS-BGP_HR-QUID-009-201_to_212. '''Suitability, Expected type of users / uses:''' This product is meant for use for educational purposes and for the managing of the marine safety, marine resources, marine and coastal environment and for climate and seasonal studies. '''Dataset names: ''' *cmems_obs_oc_med_bgc_tur_spm_chl_nrt_l4-hr-mosaic_P1M-v01 *cmems_obs_oc_med_bgc_optics_nrt_l4-hr-mosaic_P1M-v01 *cmems_obs_oc_med_bgc_tur_spm_chl_nrt_l4-hr-mosaic_P1D-v01 *cmems_obs_oc_med_bgc_optics_nrt_l4-hr-mosaic_P1D-v01 '''Files format:''' *netCDF-4, CF-1.7 *INSPIRE compliant." '''DOI (product) :''' https://doi.org/10.48670/moi-00110

  • '''DEFINITION''' Heat transport across lines are obtained by integrating the heat fluxes along some selected sections and from top to bottom of the ocean. The values are computed from models’ daily output. The mean value over a reference period (1993-2014) and over the last full year are provided for the ensemble product and the individual reanalysis, as well as the standard deviation for the ensemble product over the reference period (1993-2014). The values are given in PetaWatt (PW). '''CONTEXT''' The ocean transports heat and mass by vertical overturning and horizontal circulation, and is one of the fundamental dynamic components of the Earth’s energy budget (IPCC, 2013). There are spatial asymmetries in the energy budget resulting from the Earth’s orientation to the sun and the meridional variation in absorbed radiation which support a transfer of energy from the tropics towards the poles. However, there are spatial variations in the loss of heat by the ocean through sensible and latent heat fluxes, as well as differences in ocean basin geometry and current systems. These complexities support a pattern of oceanic heat transport that is not strictly from lower to high latitudes. Moreover, it is not stationary and we are only beginning to unravel its variability. '''CMEMS KEY FINDINGS''' The mean transports estimated by the ensemble global reanalysis are comparable to estimates based on observations; the uncertainties on these integrated quantities are still large in all the available products. Note: The key findings will be updated annually in November, in line with OMI evolutions. '''DOI (product):''' https://doi.org/10.48670/moi-00245

  • '''This product has been archived''' For operationnal and online products, please visit https://marine.copernicus.eu '''DEFINITION''' The time series are derived from the regional chlorophyll reprocessed (REP) product as distributed by CMEMS. This dataset, derived from multi-sensor (SeaStar-SeaWiFS, AQUA-MODIS, NOAA20-VIIRS, NPP-VIIRS, Envisat-MERIS and Sentinel3A-OLCI) Rrs spectra produced by CNR using an in-house processing chain, is obtained by means of the Mediterranean Ocean Colour regional algorithms: an updated version of the MedOC4 (Case 1 (off-shore) waters, Volpe et al., 2019, with new coefficients) and AD4 (Case 2 (coastal) waters, Berthon and Zibordi, 2004). The processing chain and the techniques used for algorithms merging are detailed in Colella et al. (2021). Monthly regional mean values are calculated by performing the average of 2D monthly mean (weighted by pixel area) over the region of interest. The deseasonalized time series is obtained by applying the X-11 seasonal adjustment methodology on the original time series as described in Colella et al. (2016), and then the Mann-Kendall test (Mann, 1945; Kendall, 1975) and Sens’s method (Sen, 1968) are subsequently applied to obtain the magnitude of trend. '''CONTEXT''' Phytoplankton and chlorophyll concentration as a proxy for phytoplankton respond rapidly to changes in environmental conditions, such as light, temperature, nutrients and mixing (Colella et al. 2016). The character of the response depends on the nature of the change drivers, and ranges from seasonal cycles to decadal oscillations (Basterretxea et al. 2018). Therefore, it is of critical importance to monitor chlorophyll concentration at multiple temporal and spatial scales, in order to be able to separate potential long-term climate signals from natural variability in the short term. In particular, phytoplankton in the Mediterranean Sea is known to respond to climate variability associated with the North Atlantic Oscillation (NAO) and El Niño Southern Oscillation (ENSO) (Basterretxea et al. 2018, Colella et al. 2016). '''CMEMS KEY FINDINGS''' In the Mediterranean Sea, the trend average for the 1997-2020 period is slightly negative (-0.580.62% per year). Due to the change in processing techniques and chlorophyll retrieval, this trend estimate cannot be compared directly to those previously reported. The observations time series (in grey) shows minima values have been quite constant until 2015 and then there is a little decrease up to 2020, when an absolute minimum occurs with values lower than 0.04 mg m-3. Throughout the time series, maxima are variable year by year (with absolute maximum in 2015, >0.14 mg m-3), showing an evident reduction since 2016. In the last years of the series, the decrease of chlorophyll concentrations is also observed in the deseasonalized timeseries (in green) with a marked step in 2020. This attenuation of chlorophyll values in the last years results in an overall negative trend for the Mediterranean Sea. Note: The key findings will be updated annually in November, in line with OMI evolutions. '''DOI (product):''' https://doi.org/10.48670/moi-00259

  • '''This product has been archived''' For operational and online products, please visit https://marine.copernicus.eu '''Short description:''' This product consists of vertical profiles of the concentration of nitrates, phosphates and silicates, computed for each Argo float equipped with an oxygen sensor. The method called CANYON (Carbonate system and Nutrients concentration from hYdrological properties and Oxygen using a Neural-network) is based on a neural-network trained using high quality nutrient data collected over the last 30 years (GLODAPv2 data base, https://www.glodap.info/). The method is applied to each Argo float equipped with an oxygen sensor using as input the properties measured by the float (pressure, temperature, salinity, oxygen), and its date and position. '''DOI (product) :''' https://doi.org/10.48670/moi-00048 '''Product Citation:''' Please refer to our Technical FAQ for citing products: http://marine.copernicus.eu/faq/cite-cmems-products-cmems-credit/?idpage=169.

  • '''Short description:''' For the NWS/IBI Ocean- Sea Surface Temperature L3 Observations . This product provides daily foundation sea surface temperature from multiple satellite sources. The data are intercalibrated. This product consists in a fusion of sea surface temperature observations from multiple satellite sensors, daily, over a 0.02° resolution grid. It includes observations by polar orbiting and geostationary satellites . The L3S SST data are produced selecting only the highest quality input data from input L2P/L3P images within a strict temporal window (local nightime), to avoid diurnal cycle and cloud contamination. The observations of each sensor are intercalibrated prior to merging using a bias correction based on a multi-sensor median reference correcting the large-scale cross-sensor biases. 3 more datasets are available that only contain "per sensor type" data : Polar InfraRed (PIR), Polar MicroWave (PMW), Geostationary InfraRed (GIR) '''DOI (product) :''' https://doi.org/10.48670/moi-00310

  • '''Short description:''' The global ocean objective analysis (gridded) fields of temperature and salinity are produced from the in situ profiles available in the multiparameter near–real-time in situ product INSITU_GLO_PHYBGCWAV_DISCRETE_MYNRT_013_030, with the exception of moorings, thermosalinographs and surface drifters. The objective analysis is based on the ISAS method (Gaillard et al. 2009), a statistical estimation approach that enables the mapping of ocean in situ profiles onto three-dimensional gridded fields. The resulting gridded product has a spatial resolution of 0.5° in latitude and 0.5° in longitude at the equator and includes 187 vertical levels. It provides monthly temperature and salinity fields centered the 15th of the month, with the analysis of the previous month delivered on the 8th of each month. A monthly file (data file) gathering the observed profiles used to calculate the analysis, which are interpolated on the vertical grid, is also provided. The product covers a two-year sliding time window. Older data are available in the corresponding delayed-mode product, INSITU_GLO_PHY_TS_OA_MY_013_052. '''DOI (product) :''' https://doi.org/10.48670/moi-00037

  • '''DEFINITION''' Estimates of Ocean Heat Content (OHC) are obtained from integrated differences of the measured temperature and a climatology along a vertical profile in the ocean (von Schuckmann et al., 2018). The products used include three global reanalyses: GLORYS, C-GLORS, ORAS5 (GLOBAL_MULTIYEAR_PHY_ENS_001_031) and two in situ based reprocessed products: CORA5.2 (INSITU_GLO_PHY_TS_OA_MY_013_052) , ARMOR-3D (MULTIOBS_GLO_PHY_TSUV_3D_MYNRT_015_012). Additionally, the time series based on the method of von Schuckmann and Le Traon (2011) has been added. The regional OHC values are then averaged from 60°S-60°N aiming i) to obtain the mean OHC as expressed in Joules per meter square (J/m2) to monitor the large-scale variability and change. ii) to monitor the amount of energy in the form of heat stored in the ocean (i.e. the change of OHC in time), expressed in Watt per square meter (W/m2). Ocean heat content is one of the six Global Climate Indicators recommended by the World Meterological Organisation for Sustainable Development Goal 13 implementation (WMO, 2017). '''CONTEXT''' Knowing how much and where heat energy is stored and released in the ocean is essential for understanding the contemporary Earth system state, variability and change, as the ocean shapes our perspectives for the future (von Schuckmann et al., 2020). Variations in OHC can induce changes in ocean stratification, currents, sea ice and ice shelfs (IPCC, 2019; 2021); they set time scales and dominate Earth system adjustments to climate variability and change (Hansen et al., 2011); they are a key player in ocean-atmosphere interactions and sea level change (WCRP, 2018) and they can impact marine ecosystems and human livelihoods (IPCC, 2019). '''CMEMS KEY FINDINGS''' Since the year 2005, the upper (0-700m) near-global (60°S-60°N) ocean warms at a rate of 0.6 ± 0.1 W/m2. Note: The key findings will be updated annually in November, in line with OMI evolutions. '''DOI (product):''' https://doi.org/10.48670/moi-00234

  • '''This product has been archived''' '''Short description''': You can find here the OMEGA3D observation-based quasi-geostrophic vertical and horizontal ocean currents developed by the Consiglio Nazionale delle RIcerche. The data are provided weekly over a regular grid at 1/4° horizontal resolution, from the surface to 1500 m depth (representative of each Wednesday). The velocities are obtained by solving a diabatic formulation of the Omega equation, starting from ARMOR3D data (MULTIOBS_GLO_PHY_REP_015_002 which corresponds to former version of MULTIOBS_GLO_PHY_TSUV_3D_MYNRT_015_012) and ERA-Interim surface fluxes. '''DOI (product) :''' https://doi.org/10.25423/cmcc/multiobs_glo_phy_w_rep_015_007

  • '''Short description:''' The product MULTIOBS_GLO_PHY_SSS_L3_MYNRT_015_014 is a reformatting and a simplified version of the CATDS L3 product called “2Q” or “L2Q”. it is an intermediate product, that provides, in daily files, SSS corrected from land-sea contamination and latitudinal bias, with/without rain freshening correction. '''DOI (product) :''' https://doi.org/10.48670/mds-00368

  • '''This product has been archived''' For operationnal and online products, please visit https://marine.copernicus.eu '''DEFINITION''' We have derived an annual eutrophication and eutrophication indicator map for the North Atlantic Ocean using satellite-derived chlorophyll concentration. Using the satellite-derived chlorophyll products distributed in the regional North Atlantic CMEMS REP Ocean Colour dataset (OC- CCI), we derived P90 and P10 daily climatologies. The time period selected for the climatology was 1998-2017. For a given pixel, P90 and P10 were defined as dynamic thresholds such as 90% of the 1998-2017 chlorophyll values for that pixel were below the P90 value, and 10% of the chlorophyll values were below the P10 value. To minimise the effect of gaps in the data in the computation of these P90 and P10 climatological values, we imposed a threshold of 25% valid data for the daily climatology. For the 20-year 1998-2017 climatology this means that, for a given pixel and day of the year, at least 5 years must contain valid data for the resulting climatological value to be considered significant. Pixels where the minimum data requirements were met were not considered in further calculations. We compared every valid daily observation over 2020 with the corresponding daily climatology on a pixel-by-pixel basis, to determine if values were above the P90 threshold, below the P10 threshold or within the [P10, P90] range. Values above the P90 threshold or below the P10 were flagged as anomalous. The number of anomalous and total valid observations were stored during this process. We then calculated the percentage of valid anomalous observations (above/below the P90/P10 thresholds) for each pixel, to create percentile anomaly maps in terms of % days per year. Finally, we derived an annual indicator map for eutrophication levels: if 25% of the valid observations for a given pixel and year were above the P90 threshold, the pixel was flagged as eutrophic. Similarly, if 25% of the observations for a given pixel were below the P10 threshold, the pixel was flagged as oligotrophic. '''CONTEXT''' Eutrophication is the process by which an excess of nutrients – mainly phosphorus and nitrogen – in a water body leads to increased growth of plant material in an aquatic body. Anthropogenic activities, such as farming, agriculture, aquaculture and industry, are the main source of nutrient input in problem areas (Jickells, 1998; Schindler, 2006; Galloway et al., 2008). Eutrophication is an issue particularly in coastal regions and areas with restricted water flow, such as lakes and rivers (Howarth and Marino, 2006; Smith, 2003). The impact of eutrophication on aquatic ecosystems is well known: nutrient availability boosts plant growth – particularly algal blooms – resulting in a decrease in water quality (Anderson et al., 2002; Howarth et al.; 2000). This can, in turn, cause death by hypoxia of aquatic organisms (Breitburg et al., 2018), ultimately driving changes in community composition (Van Meerssche et al., 2019). Eutrophication has also been linked to changes in the pH (Cai et al., 2011, Wallace et al. 2014) and depletion of inorganic carbon in the aquatic environment (Balmer and Downing, 2011). Oligotrophication is the opposite of eutrophication, where reduction in some limiting resource leads to a decrease in photosynthesis by aquatic plants, reducing the capacity of the ecosystem to sustain the higher organisms in it. Eutrophication is one of the more long-lasting water quality problems in Europe (OSPAR ICG-EUT, 2017), and is on the forefront of most European Directives on water-protection. Efforts to reduce anthropogenically-induced pollution resulted in the implementation of the Water Framework Directive (WFD) in 2000. '''CMEMS KEY FINDINGS''' Some coastal and shelf waters, especially between 30 and 400N showed active oligotrophication flags for 2020, with some scattered offshore locations within the same latitudinal belt also showing oligotrophication. Eutrophication index is positive only for a small number of coastal locations just north of 40oN, and south of 30oN. In general, the indicator map showed very few areas with active eutrophication flags for 2019 and for 2020. The Third Integrated Report on the Eutrophication Status of the OSPAR Maritime Area (OSPAR ICG-EUT, 2017) reported an improvement from 2008 to 2017 in eutrophication status across offshore and outer coastal waters of the Greater North Sea, with a decrease in the size of coastal problem areas in Denmark, France, Germany, Ireland, Norway and the United Kingdom. Note: The key findings will be updated annually in November, in line with OMI evolutions. '''DOI (product):''' https://doi.org/10.48670/moi-00195