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NetCDF-4

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  • '''This product has been archived''' For operationnal and online products, please visit https://marine.copernicus.eu '''Short description:''' For the North Atlantic and Arctic oceans, the ESA Ocean Colour CCI Remote Sensing Reflectance (merged, bias-corrected Rrs) data are used to compute surface Chlorophyll (mg m-3, 1 km resolution) using the regional OC5CCI chlorophyll algorithm. The Rrs are generated by merging the data from SeaWiFS, MODIS-Aqua, MERIS, VIIRS and OLCI-3A sensors and realigning the spectra to that of the MERIS sensor. The algorithm used is OC5CCI - a variation of OC5 (Gohin et al., 2002) developed by IFREMER in collaboration with PML. As part of this development, an OC5CCI look up table was generated specifically for application over OC- CCI merged daily remote sensing reflectances. The resulting OC5CCI algorithm was tested and selected through an extensive calibration exercise that analysed the quantitative performance against in situ data for several algorithms in these specific regions. Phytoplankton functional types (PFT) dataset provides daily chlorophyll concentrations of 5 phytoplankton groups: nano-, pico-, micro-phytoplankton, diatoms and dinoflagellates. Micro consists of the sum of diatoms and dinoflagellates. L3 products are daily files, while the L4 are monthly composites. ESA-CCI Rrs raw data are provided by PML. These are processed to produce chlorophyll concentration using the same in-house software as in the operational processing. Ocean colour technique exploits the emerging electromagnetic radiation from the sea surface in different wavelengths. The spectral variability of this signal defines the so called ocean colour which is affected by the presence of phytoplankton. By comparing reflectances at different wavelengths and calibrating the result against in-situ measurements, an estimate of chlorophyll content can be derived. '''Processing information:''' ESA OC-CCI Rrs raw data are provided by Plymouth Marine Laboratory, currently at 4km resolution globally. These are processed to produce chlorophyll concentration using the same in-house software as in the operational processing. The entire CCI data set is consistent and processing is done in one go. Both OC CCI and the REP product are versioned. Standard masking criteria for detecting clouds or other contamination factors have been applied during the generation of the Rrs, i.e., land, cloud, sun glint, atmospheric correction failure, high total radiance, large solar zenith angle (70deg), large spacecraft zenith angle (56deg), coccolithophores, negative water leaving radiance, and normalized water leaving radiance at 560 nm 0.15 Wm-2 sr-1 (McClain et al., 1995). For the regional products, a variant of the OC-CCI chain is run to produce high resolution data at the 1km resolution necessary. A detailed description of the ESA OC-CCI processing system can be found in OC-CCI (2014e). '''Description of observation methods/instruments:''' Ocean colour technique exploits the emerging electromagnetic radiation from the sea surface in different wavelengths. The spectral variability of this signal defines the so called ocean colour which is affected by the presence of phytoplankton. By comparing reflectances at different wavelengths and calibrating the result against in-situ measurements, an estimate of chlorophyll content can be derived. '''Quality / Accuracy / Calibration information:''' Detailed description of cal/val is given in the relevant QUID, associated validation reports and quality documentation. '''Suitability, Expected type of users / uses:''' This product is meant for use for educational purposes and for the managing of the marine safety, marine resources, marine and coastal environment and for climate and seasonal studies. '''DOI (product) :''' https://doi.org/10.48670/moi-00071

  • '''Short description:''' The IBI-MFC provides a high-resolution wave reanalysis multi-year product for the Iberia-Biscay-Ireland (IBI) region starting in 01/01/1980, extended on yearly basis by using available reprocessed upstream data and regularly updated on monthly basis to cover the period up to month M-4 from present time using an interim processing system. The model system is designed and implemented by Météo-France and NOW Systems - the latter is in charge for the operational product post-processing and interim system run, with the support of CESGA supercomputing centre. The multi-year model configuration is based on the MFWAM model developed by Météo-France, covering the same region as the IBI near real time (NRT) analysis and forecasting product, at the same horizontal resolution of 1/36º. The system assimilates significant wave height altimeter data and wave spectral data (Envisat and CFOSAT). The MY system is forced by the ECMWF ERA5 reanalysis wind data and nested into the Global Ocean Wave Reanalysis product. The catalogue includes hourly instantaneous fields of different wave parameters, including air-sea fluxes. Additionally, climatological parameters of significant wave height and zero -crossing wave period are delivered for the reference time interval 1993-2016. '''DOI (Product)''': https://doi.org/10.48670/moi-00030

  • '''This product has been archived''' For operationnal and online products, please visit https://marine.copernicus.eu '''DEFINITION''' We have derived an annual eutrophication and eutrophication indicator map for the North Atlantic Ocean using satellite-derived chlorophyll concentration. Using the satellite-derived chlorophyll products distributed in the regional North Atlantic CMEMS REP Ocean Colour dataset (OC- CCI), we derived P90 and P10 daily climatologies. The time period selected for the climatology was 1998-2017. For a given pixel, P90 and P10 were defined as dynamic thresholds such as 90% of the 1998-2017 chlorophyll values for that pixel were below the P90 value, and 10% of the chlorophyll values were below the P10 value. To minimise the effect of gaps in the data in the computation of these P90 and P10 climatological values, we imposed a threshold of 25% valid data for the daily climatology. For the 20-year 1998-2017 climatology this means that, for a given pixel and day of the year, at least 5 years must contain valid data for the resulting climatological value to be considered significant. Pixels where the minimum data requirements were met were not considered in further calculations. We compared every valid daily observation over 2020 with the corresponding daily climatology on a pixel-by-pixel basis, to determine if values were above the P90 threshold, below the P10 threshold or within the [P10, P90] range. Values above the P90 threshold or below the P10 were flagged as anomalous. The number of anomalous and total valid observations were stored during this process. We then calculated the percentage of valid anomalous observations (above/below the P90/P10 thresholds) for each pixel, to create percentile anomaly maps in terms of % days per year. Finally, we derived an annual indicator map for eutrophication levels: if 25% of the valid observations for a given pixel and year were above the P90 threshold, the pixel was flagged as eutrophic. Similarly, if 25% of the observations for a given pixel were below the P10 threshold, the pixel was flagged as oligotrophic. '''CONTEXT''' Eutrophication is the process by which an excess of nutrients – mainly phosphorus and nitrogen – in a water body leads to increased growth of plant material in an aquatic body. Anthropogenic activities, such as farming, agriculture, aquaculture and industry, are the main source of nutrient input in problem areas (Jickells, 1998; Schindler, 2006; Galloway et al., 2008). Eutrophication is an issue particularly in coastal regions and areas with restricted water flow, such as lakes and rivers (Howarth and Marino, 2006; Smith, 2003). The impact of eutrophication on aquatic ecosystems is well known: nutrient availability boosts plant growth – particularly algal blooms – resulting in a decrease in water quality (Anderson et al., 2002; Howarth et al.; 2000). This can, in turn, cause death by hypoxia of aquatic organisms (Breitburg et al., 2018), ultimately driving changes in community composition (Van Meerssche et al., 2019). Eutrophication has also been linked to changes in the pH (Cai et al., 2011, Wallace et al. 2014) and depletion of inorganic carbon in the aquatic environment (Balmer and Downing, 2011). Oligotrophication is the opposite of eutrophication, where reduction in some limiting resource leads to a decrease in photosynthesis by aquatic plants, reducing the capacity of the ecosystem to sustain the higher organisms in it. Eutrophication is one of the more long-lasting water quality problems in Europe (OSPAR ICG-EUT, 2017), and is on the forefront of most European Directives on water-protection. Efforts to reduce anthropogenically-induced pollution resulted in the implementation of the Water Framework Directive (WFD) in 2000. '''CMEMS KEY FINDINGS''' Some coastal and shelf waters, especially between 30 and 400N showed active oligotrophication flags for 2020, with some scattered offshore locations within the same latitudinal belt also showing oligotrophication. Eutrophication index is positive only for a small number of coastal locations just north of 40oN, and south of 30oN. In general, the indicator map showed very few areas with active eutrophication flags for 2019 and for 2020. The Third Integrated Report on the Eutrophication Status of the OSPAR Maritime Area (OSPAR ICG-EUT, 2017) reported an improvement from 2008 to 2017 in eutrophication status across offshore and outer coastal waters of the Greater North Sea, with a decrease in the size of coastal problem areas in Denmark, France, Germany, Ireland, Norway and the United Kingdom. Note: The key findings will be updated annually in November, in line with OMI evolutions. '''DOI (product):''' https://doi.org/10.48670/moi-00195

  • '''DEFINITION''' The regional annual chlorophyll anomaly is computed by subtracting a reference climatology (1997-2014) from the annual chlorophyll mean, on a pixel-by-pixel basis and in log10 space. Both the annual mean and the climatology are computed employing the regional products as distributed by CMEMS, derived by application of the regional chlorophyll algorithms over remote sensing reflectances (Rrs) produced by the Plymouth Marine Laboratory (PML) using the ESA Ocean Colour Climate Change Initiative processor (ESA OC-CCI, Sathyendranath et al., 2018a). '''CONTEXT''' Phytoplankton and chlorophyll concentration as their proxy respond rapidly to changes in their physical environment. In the Mediterranean Sea, these changes are seasonal and are mostly determined by light and nutrient availability (Gregg and Rousseaux, 2014). By comparing annual mean values to the climatology, we effectively remove the seasonal signal at each grid point, while retaining information on peculiar events during the year. In particular, chlorophyll anomalies in the Mediterranean Sea can then be correlated with the North Atlantic Oscillation (NAO) and El Niño Southern Oscillation (ENSO) (Basterretxea et al 2018, Colella et al 2016). '''CMEMS KEY FINDINGS''' The 2019 average chlorophyll anomaly in the Mediterranean Sea is 1.02 mg m-3 (0.005 in log10 [mg m-3]), with a maximum value of 73 mg m-3 (1.86 log10 [mg m-3]) and a minimum value of 0.04 mg m-3 (-1.42 log10 [mg m-3]). The overall east west divided pattern reported in 2016, showing negative anomalies for the Western Mediterranean Sea and positive anomalies for the Levantine Sea (Sathyendranath et al., 2018b) is modified in 2019, with a widespread positive anomaly all over the eastern basin, which reaches the western one, up to the offshore water at the west of Sardinia. Negative anomaly values occur in the coastal areas of the basin and in some sectors of the Alboràn Sea. In the northwestern Mediterranean the values switch to be positive again in contrast to the negative values registered in 2017 anomaly. The North Adriatic Sea shows a negative anomaly offshore the Po river, but with weaker value with respect to the 2017 anomaly map.

  • '''This product has been archived''' For operationnal and online products, please visit https://marine.copernicus.eu '''DEFINITION''' The time series are derived from the regional chlorophyll reprocessed (REP) product as distributed by CMEMS. This dataset, derived from multi-sensor (SeaStar-SeaWiFS, AQUA-MODIS, NOAA20-VIIRS, NPP-VIIRS, Envisat-MERIS and Sentinel3A-OLCI) Rrs spectra produced by CNR using an in-house processing chain, is obtained by means of the Mediterranean Ocean Colour regional algorithms: an updated version of the MedOC4 (Case 1 (off-shore) waters, Volpe et al., 2019, with new coefficients) and AD4 (Case 2 (coastal) waters, Berthon and Zibordi, 2004). The processing chain and the techniques used for algorithms merging are detailed in Colella et al. (2021). Monthly regional mean values are calculated by performing the average of 2D monthly mean (weighted by pixel area) over the region of interest. The deseasonalized time series is obtained by applying the X-11 seasonal adjustment methodology on the original time series as described in Colella et al. (2016), and then the Mann-Kendall test (Mann, 1945; Kendall, 1975) and Sens’s method (Sen, 1968) are subsequently applied to obtain the magnitude of trend. '''CONTEXT''' Phytoplankton and chlorophyll concentration as a proxy for phytoplankton respond rapidly to changes in environmental conditions, such as light, temperature, nutrients and mixing (Colella et al. 2016). The character of the response depends on the nature of the change drivers, and ranges from seasonal cycles to decadal oscillations (Basterretxea et al. 2018). Therefore, it is of critical importance to monitor chlorophyll concentration at multiple temporal and spatial scales, in order to be able to separate potential long-term climate signals from natural variability in the short term. In particular, phytoplankton in the Mediterranean Sea is known to respond to climate variability associated with the North Atlantic Oscillation (NAO) and El Niño Southern Oscillation (ENSO) (Basterretxea et al. 2018, Colella et al. 2016). '''CMEMS KEY FINDINGS''' In the Mediterranean Sea, the trend average for the 1997-2020 period is slightly negative (-0.580.62% per year). Due to the change in processing techniques and chlorophyll retrieval, this trend estimate cannot be compared directly to those previously reported. The observations time series (in grey) shows minima values have been quite constant until 2015 and then there is a little decrease up to 2020, when an absolute minimum occurs with values lower than 0.04 mg m-3. Throughout the time series, maxima are variable year by year (with absolute maximum in 2015, >0.14 mg m-3), showing an evident reduction since 2016. In the last years of the series, the decrease of chlorophyll concentrations is also observed in the deseasonalized timeseries (in green) with a marked step in 2020. This attenuation of chlorophyll values in the last years results in an overall negative trend for the Mediterranean Sea. Note: The key findings will be updated annually in November, in line with OMI evolutions. '''DOI (product):''' https://doi.org/10.48670/moi-00259

  • '''This product has been archived''' For operationnal and online products, please visit https://marine.copernicus.eu '''Short description:''' For the European Ocean- The L3 multi-sensor (supercollated) product is built from bias-corrected L3 mono-sensor (collated) products at the resolution 0.02 degrees. If the native collated resolution is N and N < 0.02 the change (degradation) of resolution is done by averaging the best quality data. If N > 0.02 the collated data are associated to the nearest neighbour without interpolation nor artificial increase of the resolution. A synthesis of the bias-corrected L3 mono-sensor (collated) files remapped at resolution R is done through a selection of data based on the following hierarchy: AVHRR_METOP_B, VIIRS_NPP, SLSTRA, SEVIRI, AVHRRL-19, MODIS_A, MODIS_T, AMSR2. This hierarchy can be changed in time depending on the health of each sensor. '''DOI (product) :''' https://doi.org/10.48670/moi-00163

  • '''This product has been archived''' For operationnal and online products, please visit https://marine.copernicus.eu '''DEFINITION''' The time series are derived from the regional chlorophyll reprocessed (REP) products as distributed by CMEMS which, in turn, result from the application of the regional chlorophyll algorithms over remote sensing reflectances (Rrs) provided by the ESA Ocean Colour Climate Change Initiative (ESA OC-CCI, Sathyendranath et al. 2019; Jackson 2020). Daily regional mean values are calculated by performing the average (weighted by pixel area) over the region of interest. A fixed annual cycle is extracted from the original signal, using the Census-I method as described in Vantrepotte et al. (2009). The deasonalised time series is derived by subtracting the mean seasonal cycle from the original time series, and then fitted to a linear regression to, finally, obtain the linear trend. '''CONTEXT''' Phytoplankton – and chlorophyll concentration as a proxy for phytoplankton – respond rapidly to changes in environmental conditions, such as temperature, light and nutrients availability, and mixing. The response in the North Atlantic ranges from cyclical to decadal oscillations (Henson et al., 2009); it is therefore of critical importance to monitor chlorophyll concentration at multiple temporal and spatial scales, in order to be able to separate potential long-term climate signals from natural variability in the short term. In particular, phytoplankton in the North Atlantic are known to respond to climate variability associated with the North Atlantic Oscillation (NAO), with the initiation of the spring bloom showing a nominal correlation with sea surface temperature and the NAO index (Zhai et al., 2013). '''CMEMS KEY FINDINGS''' While the overall trend average for the 1997-2020 period in the North Atlantic Ocean is slightly positive (0.92 ± 0.13 % per year), an underlying low frequency harmonic signal can be seen in the deseasonalised data. The annual average for the region in 2020 is 0.31 mg m-3. Though no appreciable changes in the timing of the spring and autumn blooms have been observed during 2020, these reached higher chlorophyll values than the average for the time series. In particular, the spring bloom maximum in 2020, circa 0.80 mg m-3, showed an increase in chlorophyll concentration from the observations during the 2016-2019 spring blooms. Note: The key findings will be updated annually in November, in line with OMI evolutions. '''DOI (product):''' https://doi.org/10.48670/moi-00194

  • '''Short description:''' For the Global Ocean- Sea Surface Temperature L3 Observations . This product provides daily foundation sea surface temperature from multiple satellite sources. The data are intercalibrated. This product consists in a fusion of sea surface temperature observations from multiple satellite sensors, daily, over a 0.05° resolution grid. It includes observations by polar orbiting from the ESA CCI / C3S archive . The L3S SST data are produced selecting only the highest quality input data from input L2P/L3P images within a strict temporal window (local nightime), to avoid diurnal cycle and cloud contamination. The observations of each sensor are intercalibrated prior to merging using a bias correction based on a multi-sensor median reference correcting the large-scale cross-sensor biases. '''DOI (product) :''' https://doi.org/10.48670/mds-00329

  • '''This product has been archived''' For operationnal and online products, please visit https://marine.copernicus.eu '''Short description:''' For the North Atlantic and Arctic oceans, the ESA Ocean Colour CCI Remote Sensing Reflectance (merged, bias-corrected Rrs) data are used to compute surface Chlorophyll (mg m-3, 1 km resolution) using the regional OC5CCI chlorophyll algorithm. The Rrs are generated by merging the data from SeaWiFS, MODIS-Aqua, MERIS, VIIRS and OLCI-3A sensors and realigning the spectra to that of the MERIS sensor. The algorithm used is OC5CCI - a variation of OC5 (Gohin et al., 2002) developed by IFREMER in collaboration with PML. As part of this development, an OC5CCI look up table was generated specifically for application over OC- CCI merged daily remote sensing reflectances. The resulting OC5CCI algorithm was tested and selected through an extensive calibration exercise that analysed the quantitative performance against in situ data for several algorithms in these specific regions. L3 products are daily files, while the L4 are monthly composites. ESA-CCI Rrs raw data are provided by PML. These are processed to produce chlorophyll concentration using the same in-house software as in the operational processing. Ocean colour technique exploits the emerging electromagnetic radiation from the sea surface in different wavelengths. The spectral variability of this signal defines the so called ocean colour which is affected by the presence of phytoplankton. By comparing reflectances at different wavelengths and calibrating the result against in-situ measurements, an estimate of chlorophyll content can be derived. '''Processing information:''' ESA OC-CCI Rrs raw data are provided by Plymouth Marine Laboratory, currently at 4km resolution globally. These are processed to produce chlorophyll concentration using the same in-house software as in the operational processing. The entire CCI data set is consistent and processing is done in one go. Both OC CCI and the REP product are versioned. Standard masking criteria for detecting clouds or other contamination factors have been applied during the generation of the Rrs, i.e., land, cloud, sun glint, atmospheric correction failure, high total radiance, large solar zenith angle (70deg), large spacecraft zenith angle (56deg), coccolithophores, negative water leaving radiance, and normalized water leaving radiance at 560 nm 0.15 Wm-2 sr-1 (McClain et al., 1995). For the regional products, a variant of the OC-CCI chain is run to produce high resolution data at the 1km resolution necessary. A detailed description of the ESA OC-CCI processing system can be found in OC-CCI (2014e). '''Description of observation methods/instruments:''' Ocean colour technique exploits the emerging electromagnetic radiation from the sea surface in different wavelengths. The spectral variability of this signal defines the so called ocean colour which is affected by the presence of phytoplankton. By comparing reflectances at different wavelengths and calibrating the result against in-situ measurements, an estimate of chlorophyll content can be derived. '''Quality / Accuracy / Calibration information:''' Detailed description of cal/val is given in the relevant QUID, associated validation reports and quality documentation. '''Suitability, Expected type of users / uses:''' This product is meant for use for educational purposes and for the managing of the marine safety, marine resources, marine and coastal environment and for climate and seasonal studies. '''DOI (product) :''' https://doi.org/10.48670/moi-00074

  • '''This product has been archived''' For operationnal and online products, please visit https://marine.copernicus.eu '''Short description:''' For the Global Ocean- In-situ observation delivered in delayed mode. This In Situ delayed mode product integrates the best available version of in situ oxygen, chlorophyll / fluorescence and nutrients data '''DOI (product) :''' https://doi.org/10.17882/86207