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University of Bordeaux I, IGBA Talence

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  • EMODnet Chemistry aims to provide access to marine chemistry datasets and derived data products concerning eutrophication, acidity and contaminants. The importance of the selected substances and other parameters relates to the Marine Strategy Framework Directive (MSFD). This aggregated dataset contains all unrestricted EMODnet Chemistry data on potential hazardous substances, despite the fact that some data might not be related to pollution (e.g. collected by deep corer). Temperature, salinity and additional parameters are included when available. It covers the Northeast Atlantic Ocean (40W). Data were harmonised and validated by the '‘IFREMER / IDM / SISMER - Scientific Information Systems for the SEA’ in France. The dataset contains water (profiles), sediment (profiles and timeseries) and biota (timeseries). The temporal coverage is 1974–2018 for water measurements, 1966–2020 for sediment measurements and 1979–2022 for biota measurements. Regional datasets concerning contaminants are automatically harvested and the resulting collections are harmonised and validated using ODV Software and following a common methodology for all sea regions ( https://doi.org/10.6092/8b52e8d7-dc92-4305-9337-7634a5cae3f4). Parameter names are based on P01 vocabulary, which relates to BODC Parameter Usage Vocabulary and is available at: https://vocab.nerc.ac.uk/search_nvs/P01/. The harmonised dataset can be downloaded as as an ODV spreadsheet, which is composed of a metadata header followed by tab separated values. This spreadsheet can be imported into ODV Software for visualisation (more information can be found at: https://www.seadatanet.org/Software/ODV). In addition, the same dataset is offered also as a txt file in a long/vertical format, in which each P01 measurement is a record line. Additionally, there are a series of columns that split P01 terms into subcomponents (substance, CAS number, matrix...).This transposed format is more adapted to worksheet applications (e.g. LibreOffice Calc).

  • Moving 6-year analysis of Oxygen at Atlantic Sea for each season: - winter: January-March, - spring: April-June, - summer: July-September, - autumn: October-December. Every year of the time dimension corresponds to the 6-year centered average of each season. 6-year periods span from 1960-1965 until 2015-2020. Observational data span from 1960 to 2020. Depth range (IODE standard depths): -3000.0, -2500.0, -2000.0, -1750, -1500.0, -1400.0, -1300.0, -1200.0, -1100.0, -1000.0, -900.0, -800.0, -700.0, -600.0, -500.0, -400.0, -300.0, -250.0, -200.0, -150.0, -125.0, -100.0, -75.0, -50.0,-40.0, -30.0, -20.0, -10.0, -5.0, -0.0 Data Sources: observational data from SeaDataNet/EMODNet Chemistry Data Network. Description of DIVA analysis: Geostatistical data analysis by DIVA (Data-Interpolating Variational Analysis) tool. GEBCO 1min topography is used for the contouring preparation. Analyzed filed masked using relative error threshold 0.3 and 0.5 DIVA settings. Correlation length was optimized and filtered vertically and a seasonally-averaged profile was used. Signal to noise ratio was fixed to 1. Background field: the data mean value is subtracted from the data. Detrending of data: no, Advection constraint applied: no. Units: umol/l

  • Moving 6-year analysis of Water body dissolved oxygen concentration in the NorthEast Atlantic for each season: - winter: January-March, - spring: April-June, - summer: July-September, - autumn: October-December. Every year of the time dimension corresponds to the 6-year centred average of each season. 6-year periods span from 1950/1955 until 2016/2021. Observation data span from 1950 to 2021. Depth levels (IODE standard depths): [0.0, 5.0, 10.0, 20.0, 30.0, 40.0, 50.0, 75.0, 100.0, 125.0, 150.0, 200.0, 250.0, 300.0, 400.0, 500.0, 600.0, 700.0, 800.0, 900.0, 1000.0, 1100.0, 1200.0, 1300.0, 1400.0, 1500.0, 1750.0, 2000.0, 2500.0, 3000.0]. Data sources: observational data from SeaDataNet/EMODNet Chemistry Data Network. Descrption of DIVAnd analysis: the computation was done with DIVAnd (Data-Interpolating Variational Analysis in n dimensions), version 2.7.4, using GEBCO 30 sec topography for the spatial connectivity of water masses. The horizontal resolution of the produced DIVAnd maps is 0.1 degrees. Horizontal correlation length varies from 400km in open sea regions to 50km at the coast. Vertical correlation length is defined as twice the vertical resolution. Signal-to-noise ratio was fixed to 1 for vertical profiles and 0.1 for time series to account for the redundancy in the time series observations.A logarithmic transformation (DIVAnd.Anam.loglin) was applied to the data prior to the analysis to avoid unrealistic negative values. Background field: a vertically-filtered profile of the seasonal data mean value (including all years) is substracted from the data. Detrending of data: no, advection constraint applied: no. Units: umol/l.

  • This product displays for Hexachlorobenzene, positions with values counts that have been measured per matrix for each year and are present in EMODnet regional contaminants aggregated datasets, v2022. The product displays positions for every available year.

  • webODV visualisations via WMS from the harmonized, standardized, validated data collections that EMODnet Chemistry is regularly producing and publishing for all European sea basins for eutrophication and contaminants. You can analyze, visualize, subset and download EMODnet Chemistry data using interactive webODV services. More information at: https://emodnet.ec.europa.eu/en/chemistry#chemistry-services

  • This product displays for Cadmium, positions with values counts that have been measured per matrix for each year and are present in EMODnet regional contaminants aggregated datasets, v2022. The product displays positions for every available year.

  • This product displays for DDT, DDE, and DDD, median values of the last 6 available years that have been measured per matrix and are present in EMODnet regional contaminants aggregated datasets, v2022. The median values ranges are derived from the following percentiles: 0-25%, 25-75%, 75-90%, >90%. Only "good data" are used, namely data with Quality Flag=1, 2, 6, Q (SeaDataNet Quality Flag schema). For water, only surface values are used (0-15 m), for sediment and biota data at all depths are used.

  • This product displays for Hexachlorobenzene, median values of the last 6 available years that have been measured per matrix and are present in EMODnet regional contaminants aggregated datasets, v2022. The median values ranges are derived from the following percentiles: 0-25%, 25-75%, 75-90%, >90%. Only "good data" are used, namely data with Quality Flag=1, 2, 6, Q (SeaDataNet Quality Flag schema). For water, only surface values are used (0-15 m), for sediment and biota data at all depths are used.

  • This product displays for Naphthalene, positions with values counts that have been measured per matrix for each year and are present in EMODnet regional contaminants aggregated datasets, v2022. The product displays positions for every available year.

  • This product displays for Anthracene, median values of the last 6 available years that have been measured per matrix and are present in EMODnet regional contaminants aggregated datasets, v2022. The median values ranges are derived from the following percentiles: 0-25%, 25-75%, 75-90%, >90%. Only "good data" are used, namely data with Quality Flag=1, 2, 6, Q (SeaDataNet Quality Flag schema). For water, only surface values are used (0-15 m), for sediment and biota data at all depths are used.